RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 LOC107984156A0A0G2JMH3 177 aa15.33■□□□□ 0.05
HMGA2-208ENST00000537429 FAM168BA1KXE4 195 aa15.33■□□□□ 0.05
HMGA2-208ENST00000537429 ARL17AQ8IVW1 177 aa15.33■□□□□ 0.05
HMGA2-208ENST00000537429 CIRBP-AS1Q8TBR5 109 aa15.33■□□□□ 0.04
HMGA2-208ENST00000537429 PLAC8Q9NZF1 115 aa15.33■□□□□ 0.04
HMGA2-208ENST00000537429 EPM2AB3EWF7 344 aa15.32■□□□□ 0.04
HMGA2-208ENST00000537429 SCXQ7RTU7 201 aa15.32■□□□□ 0.04
HMGA2-208ENST00000537429 KRTAP7-1Q8IUC3 87 aa15.32■□□□□ 0.04
HMGA2-208ENST00000537429 PLA2G2DQ9UNK4 145 aa15.32■□□□□ 0.04
HMGA2-208ENST00000537429 EIF4EBP3O60516 100 aaPredicted RBP15.31■□□□□ 0.04
HMGA2-208ENST00000537429 XGP55808 180 aa15.31■□□□□ 0.04
HMGA2-208ENST00000537429 SOSTDC1Q6X4U4 206 aa15.31■□□□□ 0.04
HMGA2-208ENST00000537429 Q6ZVH6 145 aa15.31■□□□□ 0.04
HMGA2-208ENST00000537429 LINC00518Q8N0U6 118 aa15.31■□□□□ 0.04
HMGA2-208ENST00000537429 SPANXB1Q9NS25 103 aaPredicted RBP15.31■□□□□ 0.04
HMGA2-208ENST00000537429 NPC2P61916 151 aa15.3■□□□□ 0.04
HMGA2-208ENST00000537429 SERTAD4-AS1Q5TG53 156 aa15.3■□□□□ 0.04
HMGA2-208ENST00000537429 C2orf91Q6ZV80 131 aa15.3■□□□□ 0.04
HMGA2-208ENST00000537429 LINC00308Q8TCZ7 52 aa15.3■□□□□ 0.04
HMGA2-208ENST00000537429 FAM19A5Q7Z5A7 132 aaPredicted RBP15.29■□□□□ 0.04
HMGA2-208ENST00000537429 MIEN1Q9BRT3 115 aa15.29■□□□□ 0.04
HMGA2-208ENST00000537429 HIGD1BQ9P298 99 aa15.29■□□□□ 0.04
HMGA2-208ENST00000537429 Q8NDZ9 215 aa15.28■□□□□ 0.04
HMGA2-208ENST00000537429 UQCR10Q9UDW1 63 aa15.28■□□□□ 0.04
HMGA2-208ENST00000537429 PRO1933Q9H354 126 aa15.27■□□□□ 0.03
HMGA2-208ENST00000537429 CDK2AP2O75956 126 aa15.26■□□□□ 0.03
HMGA2-208ENST00000537429 VPREB1P12018 145 aa15.26■□□□□ 0.03
HMGA2-208ENST00000537429 SRSF9Q13242 221 aaKnown RBP eCLIP15.26■□□□□ 0.036e-10■■■■■ 30.8
HMGA2-208ENST00000537429 IFITM1P13164 125 aa15.25■□□□□ 0.03
HMGA2-208ENST00000537429 RPL24P83731 157 aaKnown RBP15.25■□□□□ 0.03
HMGA2-208ENST00000537429 IGLV5-37A0A075B6J1 123 aa15.24■□□□□ 0.03
HMGA2-208ENST00000537429 PPDPFQ9H3Y8 114 aa15.24■□□□□ 0.03
HMGA2-208ENST00000537429 MUSTN1Q8IVN3 82 aa15.23■□□□□ 0.03
HMGA2-208ENST00000537429 C22orf24Q9Y442 160 aa15.23■□□□□ 0.03
HMGA2-208ENST00000537429 COPS9Q8WXC6 57 aa15.22■□□□□ 0.03
HMGA2-208ENST00000537429 M0QXV9 152 aa15.22■□□□□ 0.03
HMGA2-208ENST00000537429 HIST1H4GQ99525 98 aa15.22■□□□□ 0.03
HMGA2-208ENST00000537429 NDUFC2O95298 119 aa15.21■□□□□ 0.03
HMGA2-208ENST00000537429 NKAPP1Q8N9T2 125 aa15.2■□□□□ 0.02
HMGA2-208ENST00000537429 PRR3P79522 188 aaKnown RBP15.19■□□□□ 0.02
HMGA2-208ENST00000537429 PHF5AQ7RTV0 110 aaKnown RBP15.19■□□□□ 0.02
HMGA2-208ENST00000537429 MRPL55Q7Z7F7 128 aaKnown RBP15.17■□□□□ 0.02
HMGA2-208ENST00000537429 BIRC6Q9NR09 4857 aa15.17■□□□□ 0.02
HMGA2-208ENST00000537429 TSTD3H0UI37 97 aa15.17■□□□□ 0.02
HMGA2-208ENST00000537429 SMR3BP02814 79 aaPredicted RBP15.17■□□□□ 0.02
HMGA2-208ENST00000537429 TAL2Q16559 108 aa15.17■□□□□ 0.02
HMGA2-208ENST00000537429 HNRNPA3P51991 378 aaKnown RBP15.16■□□□□ 0.02
HMGA2-208ENST00000537429 HSPG2P98160 4391 aa15.16■□□□□ 0.02
HMGA2-208ENST00000537429 M0R378 163 aa15.14■□□□□ 0.01
HMGA2-208ENST00000537429 NCR3O14931 201 aa15.14■□□□□ 0.01
HMGA2-208ENST00000537429 LBHQ53QV2 105 aaPredicted RBP15.14■□□□□ 0.01
HMGA2-208ENST00000537429 C7orf33Q8WU49 177 aa15.14■□□□□ 0.01
HMGA2-208ENST00000537429 LINC00167Q96N53 147 aa15.14■□□□□ 0.01
HMGA2-208ENST00000537429 RYR1P21817 5038 aa15.14■□□□□ 0.01
HMGA2-208ENST00000537429 TRBV10-2A0A0K0K1G8 114 aa15.13■□□□□ 0.01
HMGA2-208ENST00000537429 KIAA1109Q2LD37 5005 aa15.13■□□□□ 0.01
HMGA2-208ENST00000537429 IGKV2-28A0A075B6P5 120 aa15.12■□□□□ 0.01
HMGA2-208ENST00000537429 GAGE10A6NGK3 116 aa15.12■□□□□ 0.01
HMGA2-208ENST00000537429 IGKV2D-28P01615 120 aa15.12■□□□□ 0.01
HMGA2-208ENST00000537429 UBE2BP63146 152 aa15.12■□□□□ 0.01
HMGA2-208ENST00000537429 A4D1N5 150 aa15.11■□□□□ 0.01
HMGA2-208ENST00000537429 HSD52Q0P140 79 aa15.11■□□□□ 0.01
HMGA2-208ENST00000537429 CEND1Q8N111 149 aa15.11■□□□□ 0.01
HMGA2-208ENST00000537429 KRTAP11-1Q8IUC1 163 aa15.09■□□□□ 0.01
HMGA2-208ENST00000537429 LINC00528Q8N1L1 170 aa15.09■□□□□ 0.01
HMGA2-208ENST00000537429 RPL37AP8A6NKH3 93 aa15.07■□□□□ 0
HMGA2-208ENST00000537429 IGLV1-50A0A075B6I6 118 aa15.07■□□□□ 0
HMGA2-208ENST00000537429 LINC00337Q8N6G1 96 aa15.06■□□□□ 0
HMGA2-208ENST00000537429 FAT1Q14517 4588 aa15.05■□□□□ -0
HMGA2-208ENST00000537429 TRBV10-3A0A0K0K1G6 114 aa15.04■□□□□ -0
HMGA2-208ENST00000537429 FAM229AH3BQW9 127 aa15.03■□□□□ -0
HMGA2-208ENST00000537429 IGLV6-57P01721 117 aa15.03■□□□□ -0
HMGA2-208ENST00000537429 DDTP30046 118 aa15.03■□□□□ -0
HMGA2-208ENST00000537429 FXYD2P54710 66 aa15.03■□□□□ -0
HMGA2-208ENST00000537429 CTAG1AP78358 180 aa15.03■□□□□ -0
HMGA2-208ENST00000537429 S100A7L2Q5SY68 101 aa15.03■□□□□ -0
HMGA2-208ENST00000537429 PSORS1C2Q9UIG4 136 aa15.02□□□□□ -0.01
HMGA2-208ENST00000537429 VPS13BQ7Z7G8 4022 aa15.01□□□□□ -0.01
HMGA2-208ENST00000537429 OR13C6PQ8NH95 151 aa15.01□□□□□ -0.01
HMGA2-208ENST00000537429 TMEM126AQ9H061 195 aa15.01□□□□□ -0.01
HMGA2-208ENST00000537429 TMEM238LA0A1B0GVL6 79 aa15□□□□□ -0.01
HMGA2-208ENST00000537429 A6NJY4 79 aa15□□□□□ -0.01
HMGA2-208ENST00000537429 RPL37AP61513 92 aaKnown RBP15□□□□□ -0.01
HMGA2-208ENST00000537429 TRAV13-2A0A0B4J235 113 aa14.99□□□□□ -0.01
HMGA2-208ENST00000537429 CFC1BP0CG36 223 aa14.99□□□□□ -0.01
HMGA2-208ENST00000537429 CFC1P0CG37 223 aa14.99□□□□□ -0.01
HMGA2-208ENST00000537429 KCNQ1DNQ9H478 68 aa14.99□□□□□ -0.01
HMGA2-208ENST00000537429 A6NDN8 102 aa14.97□□□□□ -0.01
HMGA2-208ENST00000537429 Q8N1X5 172 aa14.97□□□□□ -0.01
HMGA2-208ENST00000537429 KRTAP17-1Q9BYP8 105 aa14.97□□□□□ -0.01
HMGA2-208ENST00000537429 Q5VSD8 79 aa14.97□□□□□ -0.01
HMGA2-208ENST00000537429 BVES-AS1Q5T3Y7 98 aa14.96□□□□□ -0.02
HMGA2-208ENST00000537429 A0A0B4J2C4 111 aa14.95□□□□□ -0.02
HMGA2-208ENST00000537429 PRYO14603 147 aa14.95□□□□□ -0.02
HMGA2-208ENST00000537429 PLA2G1BP04054 148 aaKnown RBP14.95□□□□□ -0.02
HMGA2-208ENST00000537429 C1orf137Q5JT78 98 aa14.95□□□□□ -0.02
HMGA2-208ENST00000537429 REG3GQ6UW15 175 aa14.94□□□□□ -0.02
HMGA2-208ENST00000537429 TRAV23DV6A0A075B6W5 121 aa14.93□□□□□ -0.02
HMGA2-208ENST00000537429 HINT1P49773 126 aaPredicted RBP14.93□□□□□ -0.02
HMGA2-208ENST00000537429 SPRR1AP35321 89 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms