RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 HERVK_113P63121 156 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 BVES-AS1Q5T3Y7 98 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 UNQ6190/PRO20217Q6UXQ8 127 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 C2orf91Q6ZV80 131 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 C6orf48Q9UBA6 75 aa7.72□□□□□ -1.17
PRKDC-207ENST00000536483 C11orf86A6NJI1 115 aa7.71□□□□□ -1.18
PRKDC-207ENST00000536483 BATFQ16520 125 aa7.71□□□□□ -1.18
PRKDC-207ENST00000536483 C9orf116Q5BN46 136 aaPredicted RBP7.71□□□□□ -1.18
PRKDC-207ENST00000536483 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
PRKDC-207ENST00000536483 A0A0J9YXV3 536 aa7.7□□□□□ -1.18
PRKDC-207ENST00000536483 A6NDN8 102 aa7.7□□□□□ -1.18
PRKDC-207ENST00000536483 SRSF9Q13242 221 aaKnown RBP eCLIP7.7□□□□□ -1.18
PRKDC-207ENST00000536483 Q6ZRP5 223 aa7.7□□□□□ -1.18
PRKDC-207ENST00000536483 Q8IZM0 81 aa7.7□□□□□ -1.18
PRKDC-207ENST00000536483 TINCRA0A1B0GVN0 87 aa7.69□□□□□ -1.18
PRKDC-207ENST00000536483 PCP2Q8IVA1 136 aa7.69□□□□□ -1.18
PRKDC-207ENST00000536483 CDKN2A-AS1Q9UH64 79 aa7.69□□□□□ -1.18
PRKDC-207ENST00000536483 MYMXA0A1B0GTQ4 84 aa7.68□□□□□ -1.18
PRKDC-207ENST00000536483 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
PRKDC-207ENST00000536483 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
PRKDC-207ENST00000536483 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
PRKDC-207ENST00000536483 IGKV2D-26A0A0A0MRZ7 120 aa7.67□□□□□ -1.18
PRKDC-207ENST00000536483 KRTAP10-8P60410 259 aa7.67□□□□□ -1.18
PRKDC-207ENST00000536483 C2orf82Q6UX34 121 aa7.67□□□□□ -1.18
PRKDC-207ENST00000536483 GEMIN7Q9H840 131 aaKnown RBP7.67□□□□□ -1.18
PRKDC-207ENST00000536483 H3BRM9 83 aa7.66□□□□□ -1.18
PRKDC-207ENST00000536483 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
PRKDC-207ENST00000536483 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
PRKDC-207ENST00000536483 SMIM1B2RUZ4 78 aa7.65□□□□□ -1.18
PRKDC-207ENST00000536483 CXCL5P42830 114 aa7.65□□□□□ -1.18
PRKDC-207ENST00000536483 REG3GQ6UW15 175 aa7.65□□□□□ -1.18
PRKDC-207ENST00000536483 PLEKHB2Q96CS7 222 aa7.65□□□□□ -1.18
PRKDC-207ENST00000536483 PRSS2P07478 247 aa7.64□□□□□ -1.19
PRKDC-207ENST00000536483 CKS1BP61024 79 aa7.64□□□□□ -1.19
PRKDC-207ENST00000536483 LINC00469Q8N7U9 141 aa7.64□□□□□ -1.19
PRKDC-207ENST00000536483 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
PRKDC-207ENST00000536483 TMEM223A0PJW6 202 aa7.63□□□□□ -1.19
PRKDC-207ENST00000536483 TAX1BP3O14907 124 aa7.63□□□□□ -1.19
PRKDC-207ENST00000536483 LEPROTO15243 131 aa7.63□□□□□ -1.19
PRKDC-207ENST00000536483 C9orf129Q5T035 196 aaKnown RBP7.63□□□□□ -1.19
PRKDC-207ENST00000536483 TMEM170BQ5T4T1 132 aa7.63□□□□□ -1.19
PRKDC-207ENST00000536483 PHF5AQ7RTV0 110 aaKnown RBP7.63□□□□□ -1.19
PRKDC-207ENST00000536483 CEND1Q8N111 149 aa7.63□□□□□ -1.19
PRKDC-207ENST00000536483 LPAP08519 4548 aa7.62□□□□□ -1.19
PRKDC-207ENST00000536483 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
PRKDC-207ENST00000536483 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
PRKDC-207ENST00000536483 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
PRKDC-207ENST00000536483 TOMM7Q9P0U1 55 aa7.62□□□□□ -1.19
PRKDC-207ENST00000536483 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
PRKDC-207ENST00000536483 IGLV5-39A0A0G2JS06 123 aa7.61□□□□□ -1.19
PRKDC-207ENST00000536483 TMEM238LA0A1B0GVL6 79 aa7.61□□□□□ -1.19
PRKDC-207ENST00000536483 A6NJY4 79 aa7.61□□□□□ -1.19
PRKDC-207ENST00000536483 ZNF815PA8K554 130 aa7.61□□□□□ -1.19
PRKDC-207ENST00000536483 SMIM13P0DJ93 91 aa7.61□□□□□ -1.19
PRKDC-207ENST00000536483 ZNF22P17026 224 aaPredicted RBP7.61□□□□□ -1.19
PRKDC-207ENST00000536483 LGALS3P17931 250 aaKnown RBP7.61□□□□□ -1.19
PRKDC-207ENST00000536483 TP73-AS1Q9UF72 201 aa7.61□□□□□ -1.19
PRKDC-207ENST00000536483 C9orf118A6NHY6 69 aa7.6□□□□□ -1.19
PRKDC-207ENST00000536483 J3QQQ9 107 aa7.6□□□□□ -1.19
PRKDC-207ENST00000536483 UBE2V1Q13404 147 aa7.6□□□□□ -1.19
PRKDC-207ENST00000536483 KRTAP11-1Q8IUC1 163 aa7.6□□□□□ -1.19
PRKDC-207ENST00000536483 COX7B2Q8TF08 81 aa7.6□□□□□ -1.19
PRKDC-207ENST00000536483 HIST1H4GQ99525 98 aa7.6□□□□□ -1.19
PRKDC-207ENST00000536483 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.19
PRKDC-207ENST00000536483 A0A1B0GWB2 263 aa7.58□□□□□ -1.2
PRKDC-207ENST00000536483 IGLV7-43P04211 117 aa7.58□□□□□ -1.2
PRKDC-207ENST00000536483 Q6ZVH6 145 aa7.58□□□□□ -1.2
PRKDC-207ENST00000536483 FAM19A5Q7Z5A7 132 aaPredicted RBP7.58□□□□□ -1.2
PRKDC-207ENST00000536483 M0QXV9 152 aa7.57□□□□□ -1.2
PRKDC-207ENST00000536483 SPINK8P0C7L1 97 aa7.57□□□□□ -1.2
PRKDC-207ENST00000536483 VAMP3Q15836 100 aa7.57□□□□□ -1.2
PRKDC-207ENST00000536483 C1orf137Q5JT78 98 aa7.57□□□□□ -1.2
PRKDC-207ENST00000536483 GTF2H5Q6ZYL4 71 aa7.57□□□□□ -1.2
PRKDC-207ENST00000536483 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
PRKDC-207ENST00000536483 TMEM238C9JI98 176 aa7.55□□□□□ -1.2
PRKDC-207ENST00000536483 TIMM17BO60830 172 aa7.55□□□□□ -1.2
PRKDC-207ENST00000536483 FXYD2P54710 66 aa7.55□□□□□ -1.2
PRKDC-207ENST00000536483 XAGE1AQ9HD64 81 aa7.55□□□□□ -1.2
PRKDC-207ENST00000536483 C22orf24Q9Y442 160 aa7.55□□□□□ -1.2
PRKDC-207ENST00000536483 IGLV5-37A0A075B6J1 123 aa7.54□□□□□ -1.2
PRKDC-207ENST00000536483 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
PRKDC-207ENST00000536483 DIRC1Q969H9 104 aa7.54□□□□□ -1.2
PRKDC-207ENST00000536483 A0A0J9YXY3 114 aa7.53□□□□□ -1.2
PRKDC-207ENST00000536483 FABP2P12104 132 aa7.53□□□□□ -1.2
PRKDC-207ENST00000536483 COX17Q14061 63 aa7.53□□□□□ -1.2
PRKDC-207ENST00000536483 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
PRKDC-207ENST00000536483 PPDPFQ9H3Y8 114 aa7.53□□□□□ -1.2
PRKDC-207ENST00000536483 A0A1W2PPM0 123 aa7.52□□□□□ -1.21
PRKDC-207ENST00000536483 GAGE10A6NGK3 116 aa7.52□□□□□ -1.21
PRKDC-207ENST00000536483 H0Y9J4 135 aa7.52□□□□□ -1.21
PRKDC-207ENST00000536483 UBE2BP63146 152 aa7.52□□□□□ -1.21
PRKDC-207ENST00000536483 RPL24P83731 157 aaKnown RBP7.52□□□□□ -1.21
PRKDC-207ENST00000536483 NHP2Q9NX24 153 aaKnown RBP7.52□□□□□ -1.21
PRKDC-207ENST00000536483 IFITM1P13164 125 aa7.51□□□□□ -1.21
PRKDC-207ENST00000536483 TSPEAR-AS2P59090 65 aa7.51□□□□□ -1.21
PRKDC-207ENST00000536483 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
PRKDC-207ENST00000536483 MRPL55Q7Z7F7 128 aaKnown RBP7.51□□□□□ -1.21
PRKDC-207ENST00000536483 ZNF625Q96I27 306 aaPredicted RBP7.51□□□□□ -1.21
PRKDC-207ENST00000536483 NDUFA12Q9UI09 145 aa7.51□□□□□ -1.21
PRKDC-207ENST00000536483 H3BUT2 72 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 626.8 ms