RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 VPREB1P12018 145 aa7.95□□□□□ -1.14
PRKDC-206ENST00000536429 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
PRKDC-206ENST00000536429 HSPB8Q9UJY1 196 aa7.95□□□□□ -1.14
PRKDC-206ENST00000536429 COX17Q14061 63 aa7.94□□□□□ -1.14
PRKDC-206ENST00000536429 LRP2P98164 4655 aa7.94□□□□□ -1.14
PRKDC-206ENST00000536429 KRTAP1-4P0C5Y4 121 aa7.93□□□□□ -1.14
PRKDC-206ENST00000536429 LINC00158P58513 81 aa7.93□□□□□ -1.14
PRKDC-206ENST00000536429 NKAPP1Q8N9T2 125 aa7.93□□□□□ -1.14
PRKDC-206ENST00000536429 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
PRKDC-206ENST00000536429 ZNF861PO60384 105 aa7.92□□□□□ -1.14
PRKDC-206ENST00000536429 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
PRKDC-206ENST00000536429 SMIM13P0DJ93 91 aa7.92□□□□□ -1.14
PRKDC-206ENST00000536429 SFTA2Q6UW10 78 aa7.92□□□□□ -1.14
PRKDC-206ENST00000536429 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
PRKDC-206ENST00000536429 BCE1O60756 84 aa7.91□□□□□ -1.14
PRKDC-206ENST00000536429 DPM2O94777 84 aa7.91□□□□□ -1.14
PRKDC-206ENST00000536429 PLNP26678 52 aa7.91□□□□□ -1.14
PRKDC-206ENST00000536429 NDUFA12Q9UI09 145 aa7.91□□□□□ -1.14
PRKDC-206ENST00000536429 LEPROTO15243 131 aa7.89□□□□□ -1.15
PRKDC-206ENST00000536429 IGKCP01834 107 aa7.89□□□□□ -1.15
PRKDC-206ENST00000536429 MEIG1Q5JSS6 88 aa7.89□□□□□ -1.15
PRKDC-206ENST00000536429 MAP1LC3CQ9BXW4 147 aa7.89□□□□□ -1.15
PRKDC-206ENST00000536429 IGLV1-50A0A075B6I6 118 aa7.88□□□□□ -1.15
PRKDC-206ENST00000536429 TMEM238C9JI98 176 aa7.88□□□□□ -1.15
PRKDC-206ENST00000536429 RPL24P83731 157 aaKnown RBP7.88□□□□□ -1.15
PRKDC-206ENST00000536429 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
PRKDC-206ENST00000536429 MIR7-3HGQ8N6C7 128 aa7.88□□□□□ -1.15
PRKDC-206ENST00000536429 MYMXA0A1B0GTQ4 84 aa7.87□□□□□ -1.15
PRKDC-206ENST00000536429 SYS1-DBNDD2H3BUS1 97 aa7.87□□□□□ -1.15
PRKDC-206ENST00000536429 J3QQQ9 107 aa7.87□□□□□ -1.15
PRKDC-206ENST00000536429 HERV-K104P63124 156 aa7.87□□□□□ -1.15
PRKDC-206ENST00000536429 PLEKHB2Q96CS7 222 aa7.87□□□□□ -1.15
PRKDC-206ENST00000536429 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
PRKDC-206ENST00000536429 DAND5Q8N907 189 aa7.86□□□□□ -1.15
PRKDC-206ENST00000536429 M0R378 163 aa7.85□□□□□ -1.15
PRKDC-206ENST00000536429 HERVK_113P61574 105 aa7.85□□□□□ -1.15
PRKDC-206ENST00000536429 COA6Q5JTJ3 125 aaKnown RBP7.85□□□□□ -1.15
PRKDC-206ENST00000536429 BOD1L2Q8IYS8 172 aa7.85□□□□□ -1.15
PRKDC-206ENST00000536429 TMEM126AQ9H061 195 aa7.85□□□□□ -1.15
PRKDC-206ENST00000536429 NCR3O14931 201 aa7.84□□□□□ -1.15
PRKDC-206ENST00000536429 ATP6V1G1O75348 118 aa7.84□□□□□ -1.15
PRKDC-206ENST00000536429 UBE2AP49459 152 aa7.84□□□□□ -1.15
PRKDC-206ENST00000536429 PRLHP81277 87 aa7.84□□□□□ -1.15
PRKDC-206ENST00000536429 LGALS3P17931 250 aaKnown RBP7.83□□□□□ -1.16
PRKDC-206ENST00000536429 LINC01545Q5VT33 79 aa7.83□□□□□ -1.16
PRKDC-206ENST00000536429 ANAPC11Q9NYG5 84 aa7.83□□□□□ -1.16
PRKDC-206ENST00000536429 LPAP08519 4548 aa7.82□□□□□ -1.16
PRKDC-206ENST00000536429 A0A087X002 238 aa7.82□□□□□ -1.16
PRKDC-206ENST00000536429 E9PLD3 99 aa7.82□□□□□ -1.16
PRKDC-206ENST00000536429 C3orf79P0CE67 100 aa7.82□□□□□ -1.16
PRKDC-206ENST00000536429 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
PRKDC-206ENST00000536429 LINC00587B1AMM8 73 aa7.81□□□□□ -1.16
PRKDC-206ENST00000536429 NMUP48645 174 aa7.81□□□□□ -1.16
PRKDC-206ENST00000536429 PET117Q6UWS5 81 aa7.81□□□□□ -1.16
PRKDC-206ENST00000536429 EIF4EBP3O60516 100 aaPredicted RBP7.8□□□□□ -1.16
PRKDC-206ENST00000536429 ADAMTSL4-AS1Q5T5F5 129 aa7.8□□□□□ -1.16
PRKDC-206ENST00000536429 IGKV2D-26A0A0A0MRZ7 120 aa7.79□□□□□ -1.16
PRKDC-206ENST00000536429 LOC107984156A0A0G2JMH3 177 aa7.79□□□□□ -1.16
PRKDC-206ENST00000536429 A0A0J9YXY3 114 aa7.79□□□□□ -1.16
PRKDC-206ENST00000536429 KRTDAPP60985 99 aa7.79□□□□□ -1.16
PRKDC-206ENST00000536429 SOSTDC1Q6X4U4 206 aa7.79□□□□□ -1.16
PRKDC-206ENST00000536429 ARL17AQ8IVW1 177 aa7.79□□□□□ -1.16
PRKDC-206ENST00000536429 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
PRKDC-206ENST00000536429 NPC2P61916 151 aa7.78□□□□□ -1.16
PRKDC-206ENST00000536429 TTTY13Q9BZ97 58 aa7.78□□□□□ -1.16
PRKDC-206ENST00000536429 RPL13AP40429 203 aaKnown RBP7.77□□□□□ -1.17
PRKDC-206ENST00000536429 S100A1P23297 94 aa7.76□□□□□ -1.17
PRKDC-206ENST00000536429 KRTAP13-2Q52LG2 175 aa7.76□□□□□ -1.17
PRKDC-206ENST00000536429 LITAFQ99732 161 aa7.76□□□□□ -1.17
PRKDC-206ENST00000536429 KCNQ1DNQ9H478 68 aa7.76□□□□□ -1.17
PRKDC-206ENST00000536429 KRTAP4-16G5E9R7 235 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-206ENST00000536429 PRYO14603 147 aa7.75□□□□□ -1.17
PRKDC-206ENST00000536429 SPRR1AP35321 89 aa7.75□□□□□ -1.17
PRKDC-206ENST00000536429 HIGD2AQ9BW72 106 aa7.75□□□□□ -1.17
PRKDC-206ENST00000536429 RNF213Q63HN8 5207 aa7.75□□□□□ -1.17
PRKDC-206ENST00000536429 CRYGAP11844 174 aa7.74□□□□□ -1.17
PRKDC-206ENST00000536429 ATOH7Q8N100 152 aa7.74□□□□□ -1.17
PRKDC-206ENST00000536429 ZNF815PA8K554 130 aa7.73□□□□□ -1.17
PRKDC-206ENST00000536429 ANKRD39Q53RE8 183 aa7.73□□□□□ -1.17
PRKDC-206ENST00000536429 LINC00337Q8N6G1 96 aa7.73□□□□□ -1.17
PRKDC-206ENST00000536429 TYMSOSQ8TAI1 123 aa7.73□□□□□ -1.17
PRKDC-206ENST00000536429 MIEN1Q9BRT3 115 aa7.73□□□□□ -1.17
PRKDC-206ENST00000536429 SPANXB1Q9NS25 103 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-206ENST00000536429 TRBV10-2A0A0K0K1G8 114 aa7.72□□□□□ -1.17
PRKDC-206ENST00000536429 DDTP30046 118 aa7.72□□□□□ -1.17
PRKDC-206ENST00000536429 HIST3H2BBQ8N257 126 aa7.72□□□□□ -1.17
PRKDC-206ENST00000536429 NDUFC2O95298 119 aa7.71□□□□□ -1.18
PRKDC-206ENST00000536429 IGLV6-57P01721 117 aa7.71□□□□□ -1.18
PRKDC-206ENST00000536429 FAM229BQ4G0N7 80 aa7.71□□□□□ -1.18
PRKDC-206ENST00000536429 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
PRKDC-206ENST00000536429 ETDCA0A1B0GVM5 59 aa7.7□□□□□ -1.18
PRKDC-206ENST00000536429 C20orf202A1L168 122 aa7.7□□□□□ -1.18
PRKDC-206ENST00000536429 TIMM17BO60830 172 aa7.7□□□□□ -1.18
PRKDC-206ENST00000536429 TSPAN13O95857 204 aa7.7□□□□□ -1.18
PRKDC-206ENST00000536429 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
PRKDC-206ENST00000536429 SPRR4Q96PI1 79 aa7.7□□□□□ -1.18
PRKDC-206ENST00000536429 HIST1H2BLQ99880 126 aa7.7□□□□□ -1.18
PRKDC-206ENST00000536429 B5MCH6 92 aa7.69□□□□□ -1.18
PRKDC-206ENST00000536429 C3orf22Q8N5N4 141 aa7.69□□□□□ -1.18
PRKDC-206ENST00000536429 ERC2-IT1O76042 136 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms