RNA–Protein interactions for RNA: ENST00000535949.5

ATXN2-214, Transcript of ataxin 2, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-214	ENST00000535949		Q9HAA7	133 aa		4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949	TRBV7-6	A0A0J9YX20	115 aa		4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949	RPL13A	P40429	203 aa	Known RBP	4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949	C2orf82	Q6UX34	121 aa		4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949	NOTCH1	P46531	2555 aa		4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949		H3BMG7	143 aa		4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949		H3BQ85	93 aa		4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949	NBEAL2	Q6ZNJ1	2754 aa		4.74	□□□□□ -1.65
ATXN2-214	ENST00000535949		H0YGX0	51 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	PSCA	O43653	123 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	PFN2	P35080	140 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949		Q6ZRN7	208 aa	Predicted RBP	4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949		Q6ZRU5	148 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	TMEM126A	Q9H061	195 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	DNAH1	Q9P2D7	4330 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	WFDC2	Q14508	124 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	C6orf223	Q8N319	242 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	PRO0461	Q9UI25	63 aa		4.73	□□□□□ -1.65
ATXN2-214	ENST00000535949	EIF4EBP3	O60516	100 aa	Predicted RBP	4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	ATXN8	Q156A1	80 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	C10orf25	Q5T742	122 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	KRTAP1-5	Q9BYS1	174 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	LINC00474	Q9P2X8	69 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949		M0R378	163 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949		Q1RN00	199 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	HIGD2B	Q4VC39	106 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	CASC10	Q5T4H9	136 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	LINC00476	Q8WZB0	136 aa		4.72	□□□□□ -1.65
ATXN2-214	ENST00000535949	VPS13D	Q5THJ4	4388 aa		4.71	□□□□□ -1.66
ATXN2-214	ENST00000535949	IGKV2-28	A0A075B6P5	120 aa		4.71	□□□□□ -1.66
ATXN2-214	ENST00000535949	LRCOL1	A6NCL2	159 aa		4.71	□□□□□ -1.66
ATXN2-214	ENST00000535949	SNCG	O76070	127 aa		4.71	□□□□□ -1.66
ATXN2-214	ENST00000535949	IGKV2D-28	P01615	120 aa		4.71	□□□□□ -1.66
ATXN2-214	ENST00000535949	PSMB2	P49721	201 aa		4.71	□□□□□ -1.66
ATXN2-214	ENST00000535949	DAND5	Q8N907	189 aa		4.71	□□□□□ -1.66
ATXN2-214	ENST00000535949	IGLV6-57	P01721	117 aa		4.7	□□□□□ -1.66
ATXN2-214	ENST00000535949	TRAC	P01848	142 aa		4.7	□□□□□ -1.66
ATXN2-214	ENST00000535949	ETDB	Q3ZM63	59 aa		4.7	□□□□□ -1.66
ATXN2-214	ENST00000535949	VPREB1	P12018	145 aa		4.7	□□□□□ -1.66
ATXN2-214	ENST00000535949	LINC00337	Q8N6G1	96 aa		4.69	□□□□□ -1.66
ATXN2-214	ENST00000535949	C16orf90	A8MZG2	172 aa		4.69	□□□□□ -1.66
ATXN2-214	ENST00000535949	LST1	O00453	97 aa		4.69	□□□□□ -1.66
ATXN2-214	ENST00000535949	TRIAP1	O43715	76 aa		4.69	□□□□□ -1.66
ATXN2-214	ENST00000535949	C1orf134	Q5TEV5	83 aa		4.69	□□□□□ -1.66
ATXN2-214	ENST00000535949		H3BT86	120 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	SCGB1C2	P0DMR2	95 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	SCGB1A1	P11684	91 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949		Q8N814	137 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949		A0A0U1RRA0	63 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	PRY	O14603	147 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	NPC2	P61916	151 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	C9orf163	Q8N9P6	203 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	SIGMAR1	Q99720	223 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	EPM2A	B3EWF7	344 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	TCL1B	O95988	128 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	S100A7L2	Q5SY68	101 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	PRKDC	P78527	4128 aa	Known RBP	4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	DNHD1	Q96M86	4753 aa		4.68	□□□□□ -1.66
ATXN2-214	ENST00000535949	C9orf116	Q5BN46	136 aa	Predicted RBP	4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949	MEGF8	Q7Z7M0	2845 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949		Q6ZRP5	223 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949	NKAPP1	Q8N9T2	125 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949	PPDPFL	Q8WWR9	84 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949	LINC00167	Q96N53	147 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949		A0A087WTM6	91 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949	TEN1	Q86WV5	123 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949	SMIM11B	Q8TCY0	68 aa		4.67	□□□□□ -1.66
ATXN2-214	ENST00000535949	INAFM2	P0DMQ5	153 aa		4.66	□□□□□ -1.66
ATXN2-214	ENST00000535949	MTURN	Q8N3F0	131 aa		4.66	□□□□□ -1.66
ATXN2-214	ENST00000535949	SLPI	P03973	132 aa		4.66	□□□□□ -1.66
ATXN2-214	ENST00000535949	RPL18A	Q02543	176 aa	Known RBP	4.66	□□□□□ -1.66
ATXN2-214	ENST00000535949	LINC01620	Q4KN68	170 aa		4.66	□□□□□ -1.66
ATXN2-214	ENST00000535949	C9orf129	Q5T035	196 aa	Known RBP	4.66	□□□□□ -1.66
ATXN2-214	ENST00000535949	KCNQ1DN	Q9H478	68 aa		4.66	□□□□□ -1.66
ATXN2-214	ENST00000535949	TRAV23DV6	A0A075B6W5	121 aa		4.65	□□□□□ -1.66
ATXN2-214	ENST00000535949	OR13C6P	Q8NH95	151 aa		4.65	□□□□□ -1.66
ATXN2-214	ENST00000535949	DIRC1	Q969H9	104 aa		4.65	□□□□□ -1.66
ATXN2-214	ENST00000535949	LINC00526	Q96FQ7	95 aa		4.65	□□□□□ -1.67
ATXN2-214	ENST00000535949	STAB2	Q8WWQ8	2551 aa		4.65	□□□□□ -1.67
ATXN2-214	ENST00000535949	COL7A1	Q02388	2944 aa		4.64	□□□□□ -1.67
ATXN2-214	ENST00000535949	LINC00336	Q6ZUF6	198 aa		4.64	□□□□□ -1.67
ATXN2-214	ENST00000535949		H7C2G1	150 aa		4.64	□□□□□ -1.67
ATXN2-214	ENST00000535949	NCR3	O14931	201 aa		4.64	□□□□□ -1.67
ATXN2-214	ENST00000535949	SLC25A20	O43772	301 aa		4.64	□□□□□ -1.67
ATXN2-214	ENST00000535949	LY6G6C	O95867	125 aa		4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	LCE6A	A0A183	80 aa		4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	SPRR1A	P35321	89 aa		4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	ELOF1	P60002	83 aa	Known RBP	4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949		C9JAW5	83 aa		4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	ZNF73	O43830	326 aa	Predicted RBP	4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	GAGE2E	Q4V326	116 aa		4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	ANKRD29	Q8N6D5	301 aa		4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	GAGE2D	Q9UEU5	116 aa		4.63	□□□□□ -1.67
ATXN2-214	ENST00000535949	TRBV10-3	A0A0K0K1G6	114 aa		4.62	□□□□□ -1.67
ATXN2-214	ENST00000535949	DNAL4	O96015	105 aa		4.62	□□□□□ -1.67
ATXN2-214	ENST00000535949	COX7B	P24311	80 aa		4.62	□□□□□ -1.67
ATXN2-214	ENST00000535949	XAGE1A	Q9HD64	81 aa		4.62	□□□□□ -1.67
ATXN2-214	ENST00000535949	DHRS4-AS1	Q9P1J3	65 aa		4.62	□□□□□ -1.67
ATXN2-214	ENST00000535949	PLEC	Q15149	4684 aa	Known RBP	4.62	□□□□□ -1.67
ATXN2-214	ENST00000535949	IGLV1-50	A0A075B6I6	118 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms