RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 TRBV6-4A0A1B0GX49 114 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 NCR3O14931 201 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 IGHV4-59P01825 116 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 C4orf26Q17RF5 130 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 Q5XG85 94 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 C20orf197Q8N268 126 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 LINC00337Q8N6G1 96 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 MUC7Q8TAX7 377 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 UBE2E2Q96LR5 201 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 LAMTOR3Q9UHA4 124 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 MAST4O15021 2626 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 ACANP16112 2415 aa4.6□□□□□ -1.67
USP28-202ENST00000535607 TRAV23DV6A0A075B6W5 121 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 CCL18P55774 89 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 DEFB131AP59861 70 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 BLCAPP62952 87 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 CXCL6P80162 114 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 KLKP1Q107X0 134 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 COX17Q14061 63 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 DYNLRB2Q8TF09 96 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 TOMM7Q9P0U1 55 aa4.59□□□□□ -1.67
USP28-202ENST00000535607 NACAE9PAV3 2078 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 IGKV2-28A0A075B6P5 120 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 A0A087WVE0 104 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 LOC110117498A0A087WWA1 95 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 IGKV2D-28P01615 120 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 RBM3P98179 157 aaKnown RBP4.58□□□□□ -1.68
USP28-202ENST00000535607 C6orf226Q5I0X4 101 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 ENHOQ6UWT2 76 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 Q8N814 137 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 C11orf72Q8NBR9 251 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 SMR3AQ99954 134 aa4.58□□□□□ -1.68
USP28-202ENST00000535607 F8P00451 2351 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 A0A087WZ39 114 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 TRGV1A0A0A0MS02 117 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 EPM2AB3EWF7 344 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 F8WDY8 70 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 ERC2-IT1O76042 136 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 SS18Q15532 418 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.57□□□□□ -1.68
USP28-202ENST00000535607 MTORP42345 2549 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 ZFHX3Q15911 3703 aa4.57□□□□□ -1.68
USP28-202ENST00000535607 SONP18583 2426 aaKnown RBP4.57□□□□□ -1.68
USP28-202ENST00000535607 STHQ8IWL8 128 aa4.56□□□□□ -1.68
USP28-202ENST00000535607 C11orf68Q9H3H3 251 aaKnown RBP4.56□□□□□ -1.68
USP28-202ENST00000535607 ZNF702PQ9H963 129 aa4.56□□□□□ -1.68
USP28-202ENST00000535607 H7BZZ5 65 aa4.55□□□□□ -1.68
USP28-202ENST00000535607 LINC01547P58512 204 aaPredicted RBP4.55□□□□□ -1.68
USP28-202ENST00000535607 Q8IZM0 81 aa4.55□□□□□ -1.68
USP28-202ENST00000535607 C16orf74Q96GX8 76 aa4.55□□□□□ -1.68
USP28-202ENST00000535607 C16orf95Q9H693 158 aa4.55□□□□□ -1.68
USP28-202ENST00000535607 ESM1Q9NQ30 184 aa4.55□□□□□ -1.68
USP28-202ENST00000535607 FN1P02751 2386 aaKnown RBP4.54□□□□□ -1.68
USP28-202ENST00000535607 CYSRT1A8MQ03 144 aa4.54□□□□□ -1.68
USP28-202ENST00000535607 CYSTM1Q9H1C7 97 aa4.54□□□□□ -1.68
USP28-202ENST00000535607 CUBNO60494 3623 aa4.54□□□□□ -1.68
USP28-202ENST00000535607 TRGV2A0A075B6R0 118 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 IGHV3OR16-9A0A0B4J2B5 98 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 TRGV4A0A0C4DH28 118 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 OXTP01178 125 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 HAMPP81172 84 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 NTM-AS1Q6ZSK4 140 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 FAM19A1Q7Z5A9 133 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 C6orf223Q8N319 242 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 V9GYY9 64 aa4.53□□□□□ -1.68
USP28-202ENST00000535607 NIPBLQ6KC79 2804 aaeCLIP4.52□□□□□ -1.69
USP28-202ENST00000535607 TRBV6-8A0A0A6YYG3 113 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 TRBV7-6A0A0J9YX20 115 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 F8WEM9 126 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 CDK2AP2O75956 126 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 MIFP14174 115 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 C9orf66Q5T8R8 295 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 Q6ZQT0 140 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 C4orf3Q8WVX3 66 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 NF1P21359 2839 aa4.52□□□□□ -1.69
USP28-202ENST00000535607 LINC00959A0A1B0GUT2 108 aa4.51□□□□□ -1.69
USP28-202ENST00000535607 KRTAP29-1A8MX34 341 aaPredicted RBP4.51□□□□□ -1.69
USP28-202ENST00000535607 CCL24O00175 119 aa4.51□□□□□ -1.69
USP28-202ENST00000535607 C9orf129Q5T035 196 aaKnown RBP4.51□□□□□ -1.69
USP28-202ENST00000535607 C1orf195Q5TG92 126 aa4.51□□□□□ -1.69
USP28-202ENST00000535607 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
USP28-202ENST00000535607 Q6ZVQ6 151 aa4.51□□□□□ -1.69
USP28-202ENST00000535607 LINC01006Q8NI28 216 aa4.51□□□□□ -1.69
USP28-202ENST00000535607 Q9UF83 564 aa4.51□□□□□ -1.69
USP28-202ENST00000535607 IGKV3OR2-268A0A0C4DH90 116 aa4.5□□□□□ -1.69
USP28-202ENST00000535607 DEFB114Q30KQ6 69 aa4.5□□□□□ -1.69
USP28-202ENST00000535607 LINC00336Q6ZUF6 198 aa4.5□□□□□ -1.69
USP28-202ENST00000535607 NREPQ16612 68 aa4.49□□□□□ -1.69
USP28-202ENST00000535607 C6orf99Q4VX62 202 aa4.49□□□□□ -1.69
USP28-202ENST00000535607 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
USP28-202ENST00000535607 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
USP28-202ENST00000535607 Q6ZTI0 123 aa4.49□□□□□ -1.69
USP28-202ENST00000535607 WFDC9Q8NEX5 89 aa4.49□□□□□ -1.69
USP28-202ENST00000535607 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
USP28-202ENST00000535607 C2CD3Q4AC94 2353 aa4.48□□□□□ -1.69
USP28-202ENST00000535607 A0A1B0GW54 56 aa4.48□□□□□ -1.69
USP28-202ENST00000535607 BPY2O14599 106 aa4.48□□□□□ -1.69
USP28-202ENST00000535607 FUSP35637 526 aaKnown RBP eCLIP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms