RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 CXCL5P42830 114 aa5.48□□□□□ -1.53
CCDC90B-219ENST00000534753 SRSF9Q13242 221 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCDC90B-219ENST00000534753 BAGE3Q86Y29 109 aa5.48□□□□□ -1.53
CCDC90B-219ENST00000534753 KRTAP7-1Q8IUC3 87 aa5.48□□□□□ -1.53
CCDC90B-219ENST00000534753 IGLV5-45A0A087WSX0 123 aa5.47□□□□□ -1.53
CCDC90B-219ENST00000534753 ATP5LO75964 103 aa5.47□□□□□ -1.53
CCDC90B-219ENST00000534753 IGLV7-43P04211 117 aa5.47□□□□□ -1.53
CCDC90B-219ENST00000534753 PFN2P35080 140 aa5.47□□□□□ -1.53
CCDC90B-219ENST00000534753 TMEM170BQ5T4T1 132 aa5.47□□□□□ -1.53
CCDC90B-219ENST00000534753 LINC01600Q96MT4 127 aa5.47□□□□□ -1.53
CCDC90B-219ENST00000534753 H0Y8G0 127 aa5.46□□□□□ -1.54
CCDC90B-219ENST00000534753 IGLC3P0DOY3 106 aa5.46□□□□□ -1.54
CCDC90B-219ENST00000534753 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.54
CCDC90B-219ENST00000534753 CHTOPQ9Y3Y2 248 aaKnown RBP5.46□□□□□ -1.54
CCDC90B-219ENST00000534753 C22orf24Q9Y442 160 aa5.46□□□□□ -1.54
CCDC90B-219ENST00000534753 C11orf86A6NJI1 115 aa5.45□□□□□ -1.54
CCDC90B-219ENST00000534753 ZNF22P17026 224 aaPredicted RBP5.45□□□□□ -1.54
CCDC90B-219ENST00000534753 FAM19A2Q8N3H0 131 aa5.45□□□□□ -1.54
CCDC90B-219ENST00000534753 DIRC1Q969H9 104 aa5.45□□□□□ -1.54
CCDC90B-219ENST00000534753 YPEL4Q96NS1 127 aa5.45□□□□□ -1.54
CCDC90B-219ENST00000534753 RPL37AP8A6NKH3 93 aa5.44□□□□□ -1.54
CCDC90B-219ENST00000534753 HSBP1O75506 76 aa5.44□□□□□ -1.54
CCDC90B-219ENST00000534753 TRGC2P03986 189 aa5.44□□□□□ -1.54
CCDC90B-219ENST00000534753 VPREB1P12018 145 aa5.44□□□□□ -1.54
CCDC90B-219ENST00000534753 LBHQ53QV2 105 aaPredicted RBP5.44□□□□□ -1.54
CCDC90B-219ENST00000534753 CHCHD1Q96BP2 118 aaKnown RBP5.44□□□□□ -1.54
CCDC90B-219ENST00000534753 SNRPEP62304 92 aaKnown RBP5.43□□□□□ -1.54
CCDC90B-219ENST00000534753 MRPL55Q7Z7F7 128 aaKnown RBP5.43□□□□□ -1.54
CCDC90B-219ENST00000534753 NKAPP1Q8N9T2 125 aa5.43□□□□□ -1.54
CCDC90B-219ENST00000534753 IFI27L1Q96BM0 104 aa5.43□□□□□ -1.54
CCDC90B-219ENST00000534753 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
CCDC90B-219ENST00000534753 H0Y9J4 135 aa5.42□□□□□ -1.54
CCDC90B-219ENST00000534753 SCO1O75880 301 aa5.42□□□□□ -1.54
CCDC90B-219ENST00000534753 Q75L30 129 aa5.42□□□□□ -1.54
CCDC90B-219ENST00000534753 LINC00167Q96N53 147 aa5.42□□□□□ -1.54
CCDC90B-219ENST00000534753 KRTAP10-8P60410 259 aa5.41□□□□□ -1.54
CCDC90B-219ENST00000534753 ERG28Q9UKR5 140 aa5.41□□□□□ -1.54
CCDC90B-219ENST00000534753 IGKV2-28A0A075B6P5 120 aa5.4□□□□□ -1.54
CCDC90B-219ENST00000534753 SERF1AO75920 110 aa5.4□□□□□ -1.54
CCDC90B-219ENST00000534753 IGKV2D-28P01615 120 aa5.4□□□□□ -1.54
CCDC90B-219ENST00000534753 FABP4P15090 132 aa5.4□□□□□ -1.54
CCDC90B-219ENST00000534753 LINC00158P58513 81 aa5.4□□□□□ -1.54
CCDC90B-219ENST00000534753 SND1-IT1Q9HBX3 110 aa5.4□□□□□ -1.54
CCDC90B-219ENST00000534753 TRAV12-1A0A0B4J245 112 aa5.39□□□□□ -1.55
CCDC90B-219ENST00000534753 TMEM223A0PJW6 202 aa5.39□□□□□ -1.55
CCDC90B-219ENST00000534753 NUPR1O60356 82 aa5.39□□□□□ -1.55
CCDC90B-219ENST00000534753 ATP6V1G1O75348 118 aa5.39□□□□□ -1.55
CCDC90B-219ENST00000534753 LEPROTL1O95214 131 aa5.39□□□□□ -1.55
CCDC90B-219ENST00000534753 TP73-AS1Q9UF72 201 aa5.39□□□□□ -1.55
CCDC90B-219ENST00000534753 IGLV5-37A0A075B6J1 123 aa5.38□□□□□ -1.55
CCDC90B-219ENST00000534753 COLCA2A8K830 154 aa5.38□□□□□ -1.55
CCDC90B-219ENST00000534753 ZNF861PO60384 105 aa5.38□□□□□ -1.55
CCDC90B-219ENST00000534753 UBE2AP49459 152 aa5.38□□□□□ -1.55
CCDC90B-219ENST00000534753 BCE1O60756 84 aa5.37□□□□□ -1.55
CCDC90B-219ENST00000534753 RPL28P46779 137 aaKnown RBP5.37□□□□□ -1.55
CCDC90B-219ENST00000534753 COX17Q14061 63 aa5.37□□□□□ -1.55
CCDC90B-219ENST00000534753 MEIG1Q5JSS6 88 aa5.37□□□□□ -1.55
CCDC90B-219ENST00000534753 PMCHL2Q9BQD1 86 aa5.37□□□□□ -1.55
CCDC90B-219ENST00000534753 SMIM13P0DJ93 91 aa5.36□□□□□ -1.55
CCDC90B-219ENST00000534753 RPL24P83731 157 aaKnown RBP5.36□□□□□ -1.55
CCDC90B-219ENST00000534753 SFTA2Q6UW10 78 aa5.36□□□□□ -1.55
CCDC90B-219ENST00000534753 HSPB8Q9UJY1 196 aa5.36□□□□□ -1.55
CCDC90B-219ENST00000534753 TNXBP22105 4242 aa5.35□□□□□ -1.55
CCDC90B-219ENST00000534753 TMEM238C9JI98 176 aa5.35□□□□□ -1.55
CCDC90B-219ENST00000534753 IGKV2-30P06310 120 aa5.35□□□□□ -1.55
CCDC90B-219ENST00000534753 KRTAP1-4P0C5Y4 121 aa5.35□□□□□ -1.55
CCDC90B-219ENST00000534753 FAM19A1Q7Z5A9 133 aa5.35□□□□□ -1.55
CCDC90B-219ENST00000534753 HMCN2Q8NDA2 5059 aa5.34□□□□□ -1.55
CCDC90B-219ENST00000534753 IGLV1-50A0A075B6I6 118 aa5.34□□□□□ -1.55
CCDC90B-219ENST00000534753 PRLHP81277 87 aa5.34□□□□□ -1.55
CCDC90B-219ENST00000534753 Q8NDZ9 215 aa5.34□□□□□ -1.55
CCDC90B-219ENST00000534753 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
CCDC90B-219ENST00000534753 NDUFA12Q9UI09 145 aa5.34□□□□□ -1.55
CCDC90B-219ENST00000534753 MYMXA0A1B0GTQ4 84 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 NCR3O14931 201 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 DPM2O94777 84 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 PLNP26678 52 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 GAGE2AQ6NT46 116 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 BOD1L2Q8IYS8 172 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 MIR7-3HGQ8N6C7 128 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 MAP1LC3CQ9BXW4 147 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 TMEM126AQ9H061 195 aa5.33□□□□□ -1.56
CCDC90B-219ENST00000534753 LEPROTO15243 131 aa5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 TSPAN13O95857 204 aa5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 IGKCP01834 107 aa5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 RPL13AP40429 203 aaKnown RBP5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 TSPEAR-AS2P59090 65 aa5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 HERVK_113P61574 105 aa5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 HERV-K104P63124 156 aa5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 DAND5Q8N907 189 aa5.32□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BKO60814 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BJP06899 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 LGALS3P17931 250 aaKnown RBP5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BOP23527 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BBP33778 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BDP58876 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BCP62807 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST2H2BEQ16778 126 aa5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.31□□□□□ -1.56
CCDC90B-219ENST00000534753 HIST1H2BHQ93079 126 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms