RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 H3BMM0 161 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 BCE1O60756 84 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 RNASE2P10153 161 aaKnown RBP2.12□□□□□ -2.07
USP48-215ENST00000534705 UBE2L3P68036 154 aaKnown RBP2.12□□□□□ -2.07
USP48-215ENST00000534705 PMAIP1Q13794 54 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 GOLT1AQ6ZVE7 132 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 SERP2Q8N6R1 65 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 DAND5Q8N907 189 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 TMEM75Q8N9X5 138 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 SMCR5Q8TEV8 140 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 UBE2WQ96B02 151 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 RNF5Q99942 180 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 DPH3P1Q9H4G8 78 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 OTORQ9NRC9 128 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 MRPL35Q9NZE8 188 aaKnown RBP2.12□□□□□ -2.07
USP48-215ENST00000534705 TMEM14CQ9P0S9 112 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 RBM12B-AS1Q9P1G2 102 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 PRO1854Q9UHT4 67 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 NBEAL2Q6ZNJ1 2754 aa2.12□□□□□ -2.07
USP48-215ENST00000534705 STAB2Q8WWQ8 2551 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 ALMS1Q8TCU4 4167 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 TRBV7-1A0A0A6YYK4 115 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 TRAV3A0A0B4J244 114 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 TRAV41A0A0B4J266 112 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 hADV29S1A0JD25 119 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 TMEM223A0PJW6 202 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 K7EIL1 84 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 NDUFC2O95298 119 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 TRACP01848 142 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 SAA1P0DJI8 122 aaPredicted RBP2.11□□□□□ -2.07
USP48-215ENST00000534705 PRCDQ00LT1 54 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 ATXN8Q156A1 80 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 KLK9Q2XQG4 91 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 DEFB136Q30KP8 78 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 PRNTQ86SH4 94 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 LYPD1Q8N2G4 141 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 EXOC3-AS1Q8N2X6 119 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 KLK9Q9UKQ9 250 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 C22orf24Q9Y442 160 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 SERP1Q9Y6X1 66 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 VPS13DQ5THJ4 4388 aa2.11□□□□□ -2.07
USP48-215ENST00000534705 TENM2Q9NT68 2774 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 TRAV13-1A0A0B4J241 112 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 LOC107984156A0A0G2JMH3 177 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 IGHV7-4-1A0A0J9YVY3 117 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 SDHAF1A6NFY7 115 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 LST1O00453 97 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 PYYP10082 97 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 ZNF22P17026 224 aaPredicted RBP2.1□□□□□ -2.07
USP48-215ENST00000534705 MRPS36P82909 103 aaKnown RBP2.1□□□□□ -2.07
USP48-215ENST00000534705 C10orf55Q5SWW7 151 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 Q6ZRU5 148 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 FP248Q71RG6 208 aaPredicted RBP2.1□□□□□ -2.07
USP48-215ENST00000534705 ARL17AQ8IVW1 177 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 TMEM167AQ8TBQ9 72 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 C4orf3Q8WVX3 66 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 TOMM6Q96B49 74 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 CHCHD7Q9BUK0 85 aa2.1□□□□□ -2.07
USP48-215ENST00000534705 FRAS1Q86XX4 4008 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 IGLV4-69A0A075B6H9 119 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 TMSB15BA0A087X1C1 80 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 IGIPA6NJ69 53 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 C11orf86A6NJI1 115 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 H3BUA1 57 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 BPY2O14599 106 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 ZNF56Q15929 161 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 SPINK9Q5DT21 86 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 C10orf113Q5VZT2 155 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 Q6JHZ5 121 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 LYPD5Q6UWN5 251 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 LYZL1Q6UWQ5 148 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 OBSCN-AS1Q96MR7 158 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 DSCR8Q96T75 97 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 TIMM21Q9BVV7 248 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 NDUFA4L2Q9NRX3 87 aa2.09□□□□□ -2.07
USP48-215ENST00000534705 KMT2AQ03164 3969 aa2.09□□□□□ -2.08
USP48-215ENST00000534705 DNAH17Q9UFH2 4485 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 IGHV3-49A0A0A0MS15 119 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.08□□□□□ -2.08
USP48-215ENST00000534705 FAM236DA0A1B0GTK5 79 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 ZNF815PA8K554 130 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 IBA57-AS1B1ANH7 110 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 H7BZZ5 65 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 TRGV3P03979 118 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 APELAP0DMC3 54 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 FAM236CP0DP71 79 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 CKS2P33552 79 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 FXYD7P58549 80 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 TSPEAR-AS2P59090 65 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 WT1-ASQ06250 92 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 KLKP1Q107X0 134 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 PDE6HQ13956 83 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 PLGLAQ15195 96 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 VMA21Q3ZAQ7 101 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 C2orf82Q6UX34 121 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 FAM19A3Q7Z5A8 133 aa2.08□□□□□ -2.08
USP48-215ENST00000534705 ZNF706Q9Y5V0 76 aaPredicted RBP2.08□□□□□ -2.08
USP48-215ENST00000534705 EPPK1P58107 5090 aaKnown RBP2.08□□□□□ -2.08
USP48-215ENST00000534705 TRBV19A0A075B6N1 114 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms