RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 LINC00167Q96N53 147 aa6.24□□□□□ -1.41
CSDE1-217ENST00000534699 TSTD3H0UI37 97 aa6.23□□□□□ -1.41
CSDE1-217ENST00000534699 TRGC2P03986 189 aa6.23□□□□□ -1.41
CSDE1-217ENST00000534699 LRP1Q07954 4544 aaKnown RBP6.23□□□□□ -1.41
CSDE1-217ENST00000534699 C21orf62-AS1Q17RA5 79 aa6.23□□□□□ -1.41
CSDE1-217ENST00000534699 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
CSDE1-217ENST00000534699 CHTOPQ9Y3Y2 248 aaKnown RBP6.23□□□□□ -1.41
CSDE1-217ENST00000534699 KRTAP13-1Q8IUC0 172 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 C14orf144Q96I85 54 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 DDTP30046 118 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
CSDE1-217ENST00000534699 BAGE3Q86Y29 109 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 CRYGAP11844 174 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 IFI27L1Q96BM0 104 aa6.22□□□□□ -1.41
CSDE1-217ENST00000534699 ZNF625Q96I27 306 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-217ENST00000534699 VPREB1P12018 145 aa6.21□□□□□ -1.42
CSDE1-217ENST00000534699 JOSD1Q15040 202 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-217ENST00000534699 TMEM223A0PJW6 202 aa6.21□□□□□ -1.42
CSDE1-217ENST00000534699 FABP4P15090 132 aa6.21□□□□□ -1.42
CSDE1-217ENST00000534699 HIST1H2BLQ99880 126 aa6.21□□□□□ -1.42
CSDE1-217ENST00000534699 MAP1LC3CQ9BXW4 147 aa6.21□□□□□ -1.42
CSDE1-217ENST00000534699 SND1-IT1Q9HBX3 110 aa6.2□□□□□ -1.42
CSDE1-217ENST00000534699 TMEM170BQ5T4T1 132 aa6.2□□□□□ -1.42
CSDE1-217ENST00000534699 UBE2AP49459 152 aa6.19□□□□□ -1.42
CSDE1-217ENST00000534699 HMCN2Q8NDA2 5059 aa6.19□□□□□ -1.42
CSDE1-217ENST00000534699 M0R378 163 aa6.19□□□□□ -1.42
CSDE1-217ENST00000534699 TNXBP22105 4242 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 IGKV2D-26A0A0A0MRZ7 120 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 LOC107984156A0A0G2JMH3 177 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 ARL17AQ8IVW1 177 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-217ENST00000534699 PRYO14603 147 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 HSBP1O75506 76 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 NMUP48645 174 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 PLEKHB2Q96CS7 222 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 CBY1Q9Y3M2 126 aa6.18□□□□□ -1.42
CSDE1-217ENST00000534699 MYMXA0A1B0GTQ4 84 aa6.17□□□□□ -1.42
CSDE1-217ENST00000534699 HSPB8Q9UJY1 196 aa6.17□□□□□ -1.42
CSDE1-217ENST00000534699 PLNP26678 52 aa6.17□□□□□ -1.42
CSDE1-217ENST00000534699 A0A1B0GV90 55 aa6.16□□□□□ -1.42
CSDE1-217ENST00000534699 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
CSDE1-217ENST00000534699 PFN2P35080 140 aa6.16□□□□□ -1.42
CSDE1-217ENST00000534699 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
CSDE1-217ENST00000534699 TRBV10-2A0A0K0K1G8 114 aa6.15□□□□□ -1.42
CSDE1-217ENST00000534699 HERVK_113P61574 105 aa6.15□□□□□ -1.42
CSDE1-217ENST00000534699 LINC00337Q8N6G1 96 aa6.15□□□□□ -1.42
CSDE1-217ENST00000534699 TMEM126AQ9H061 195 aa6.15□□□□□ -1.42
CSDE1-217ENST00000534699 LEPROTO15243 131 aa6.15□□□□□ -1.43
CSDE1-217ENST00000534699 PRO1933Q9H354 126 aa6.15□□□□□ -1.43
CSDE1-217ENST00000534699 LINC00158P58513 81 aa6.14□□□□□ -1.43
CSDE1-217ENST00000534699 RPL37AP8A6NKH3 93 aa6.14□□□□□ -1.43
CSDE1-217ENST00000534699 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
CSDE1-217ENST00000534699 SPRR1AP35321 89 aa6.13□□□□□ -1.43
CSDE1-217ENST00000534699 KCNQ1DNQ9H478 68 aa6.13□□□□□ -1.43
CSDE1-217ENST00000534699 PMCHL1Q16048 86 aa6.12□□□□□ -1.43
CSDE1-217ENST00000534699 FAM19A1Q7Z5A9 133 aa6.12□□□□□ -1.43
CSDE1-217ENST00000534699 NDUFC2O95298 119 aa6.12□□□□□ -1.43
CSDE1-217ENST00000534699 NDUFA12Q9UI09 145 aa6.12□□□□□ -1.43
CSDE1-217ENST00000534699 DPM2O94777 84 aa6.11□□□□□ -1.43
CSDE1-217ENST00000534699 MEIG1Q5JSS6 88 aa6.11□□□□□ -1.43
CSDE1-217ENST00000534699 GAGE10A6NGK3 116 aa6.11□□□□□ -1.43
CSDE1-217ENST00000534699 M0R143 59 aa6.11□□□□□ -1.43
CSDE1-217ENST00000534699 LINC00304Q8N9R0 145 aa6.11□□□□□ -1.43
CSDE1-217ENST00000534699 ANKRD39Q53RE8 183 aa6.1□□□□□ -1.43
CSDE1-217ENST00000534699 IGKV2-28A0A075B6P5 120 aa6.09□□□□□ -1.43
CSDE1-217ENST00000534699 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
CSDE1-217ENST00000534699 IGKV2D-28P01615 120 aa6.09□□□□□ -1.43
CSDE1-217ENST00000534699 RPS29P62273 56 aaKnown RBP6.09□□□□□ -1.43
CSDE1-217ENST00000534699 A0A087X002 238 aa6.09□□□□□ -1.44
CSDE1-217ENST00000534699 SMIM13P0DJ93 91 aa6.09□□□□□ -1.44
CSDE1-217ENST00000534699 FP248Q71RG6 208 aaPredicted RBP6.09□□□□□ -1.44
CSDE1-217ENST00000534699 SCGB1D1O95968 90 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 IGKCP01834 107 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 PCP4P48539 62 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 MIR7-3HGQ8N6C7 128 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 SPRR4Q96PI1 79 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 PPDPFQ9H3Y8 114 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-217ENST00000534699 SERF1AO75920 110 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 KRTAP13-2Q52LG2 175 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 SNHG12Q9BXW3 62 aa6.08□□□□□ -1.44
CSDE1-217ENST00000534699 KRTAP4-16G5E9R7 235 aaPredicted RBP6.07□□□□□ -1.44
CSDE1-217ENST00000534699 J3QQQ9 107 aa6.07□□□□□ -1.44
CSDE1-217ENST00000534699 TIMM17BO60830 172 aa6.07□□□□□ -1.44
CSDE1-217ENST00000534699 PRR4Q16378 134 aa6.07□□□□□ -1.44
CSDE1-217ENST00000534699 LINC00483Q53H64 154 aa6.07□□□□□ -1.44
CSDE1-217ENST00000534699 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
CSDE1-217ENST00000534699 ETDCA0A1B0GVM5 59 aa6.07□□□□□ -1.44
CSDE1-217ENST00000534699 LGALS3P17931 250 aaKnown RBP6.07□□□□□ -1.44
CSDE1-217ENST00000534699 TMEM238C9JI98 176 aa6.06□□□□□ -1.44
CSDE1-217ENST00000534699 MIEN1Q9BRT3 115 aa6.06□□□□□ -1.44
CSDE1-217ENST00000534699 E9PLD3 99 aa6.06□□□□□ -1.44
CSDE1-217ENST00000534699 TPRXLQ17RH7 258 aa6.06□□□□□ -1.44
CSDE1-217ENST00000534699 FAM19A2Q8N3H0 131 aa6.06□□□□□ -1.44
CSDE1-217ENST00000534699 LINC00310P59036 64 aa6.05□□□□□ -1.44
CSDE1-217ENST00000534699 PRLHP81277 87 aa6.05□□□□□ -1.44
CSDE1-217ENST00000534699 SSBP3-AS1Q7Z2R9 100 aa6.05□□□□□ -1.44
CSDE1-217ENST00000534699 A0A0J9YXY3 114 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms