RNA–Protein interactions for RNA: ENST00000534579.5

CTNND1-237, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-237ENST00000534579 RTL8CO15255 209 aa6.22□□□□□ -1.41
CTNND1-237ENST00000534579 LINC00242Q5T6M2 205 aa6.22□□□□□ -1.41
CTNND1-237ENST00000534579 PKD1L2Q7Z442 2459 aa6.21□□□□□ -1.41
CTNND1-237ENST00000534579 Q96NJ1 140 aa6.21□□□□□ -1.42
CTNND1-237ENST00000534579 SPAG11AQ6PDA7 123 aa6.2□□□□□ -1.42
CTNND1-237ENST00000534579 DOPEY1Q5JWR5 2465 aa6.2□□□□□ -1.42
CTNND1-237ENST00000534579 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
CTNND1-237ENST00000534579 RPL37AP61513 92 aaKnown RBP6.2□□□□□ -1.42
CTNND1-237ENST00000534579 SMIM1B2RUZ4 78 aa6.2□□□□□ -1.42
CTNND1-237ENST00000534579 LINC00313P59037 77 aa6.19□□□□□ -1.42
CTNND1-237ENST00000534579 IGIPA6NJ69 53 aa6.19□□□□□ -1.42
CTNND1-237ENST00000534579 TSPEAR-AS2P59090 65 aa6.19□□□□□ -1.42
CTNND1-237ENST00000534579 ANKRD17O75179 2603 aaKnown RBP6.19□□□□□ -1.42
CTNND1-237ENST00000534579 A0A087WVE0 104 aa6.19□□□□□ -1.42
CTNND1-237ENST00000534579 Q8N3U1 123 aa6.19□□□□□ -1.42
CTNND1-237ENST00000534579 C6orf48Q9UBA6 75 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 COL27A1Q8IZC6 1860 aaPredicted RBP6.18□□□□□ -1.42
CTNND1-237ENST00000534579 POLQO75417 2590 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 COX8CQ7Z4L0 72 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 MTORP42345 2549 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 KRTAP24-1Q3LI83 254 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 Q6ZRP5 223 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 CEP350Q5VT06 3117 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 AGRNO00468 2067 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 CXCL6P80162 114 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 Q6ZSN1 163 aa6.18□□□□□ -1.42
CTNND1-237ENST00000534579 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
CTNND1-237ENST00000534579 A8MTW9 85 aa6.17□□□□□ -1.42
CTNND1-237ENST00000534579 EPG5Q9HCE0 2579 aa6.17□□□□□ -1.42
CTNND1-237ENST00000534579 WWC2-AS2Q96NR7 200 aa6.16□□□□□ -1.42
CTNND1-237ENST00000534579 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.42
CTNND1-237ENST00000534579 APLNQ9ULZ1 77 aa6.15□□□□□ -1.42
CTNND1-237ENST00000534579 KIAA0087Q14695 138 aa6.15□□□□□ -1.43
CTNND1-237ENST00000534579 Q8NBF4 154 aa6.15□□□□□ -1.43
CTNND1-237ENST00000534579 SMIM29Q86T20 159 aa6.14□□□□□ -1.43
CTNND1-237ENST00000534579 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
CTNND1-237ENST00000534579 ACANP16112 2415 aa6.14□□□□□ -1.43
CTNND1-237ENST00000534579 TP53AIP1Q9HCN2 124 aa6.14□□□□□ -1.43
CTNND1-237ENST00000534579 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
CTNND1-237ENST00000534579 LINC00315P59091 139 aa6.13□□□□□ -1.43
CTNND1-237ENST00000534579 A0A1B0GUV1 79 aa6.13□□□□□ -1.43
CTNND1-237ENST00000534579 ADAMTSL4-AS1Q5T5F5 129 aa6.13□□□□□ -1.43
CTNND1-237ENST00000534579 KIF25-AS1Q9Y6Z4 181 aa6.12□□□□□ -1.43
CTNND1-237ENST00000534579 SSBP3-AS1Q7Z2R9 100 aa6.12□□□□□ -1.43
CTNND1-237ENST00000534579 C11orf72Q8NBR9 251 aa6.12□□□□□ -1.43
CTNND1-237ENST00000534579 NBDYA0A0U1RRE5 68 aa6.12□□□□□ -1.43
CTNND1-237ENST00000534579 LINC01546A6NGU7 62 aa6.12□□□□□ -1.43
CTNND1-237ENST00000534579 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
CTNND1-237ENST00000534579 AMELXQ99217 191 aa6.11□□□□□ -1.43
CTNND1-237ENST00000534579 SMCPP49901 116 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-237ENST00000534579 LINC01561Q8N1V8 128 aa6.1□□□□□ -1.43
CTNND1-237ENST00000534579 C8orf87E5RJ46 101 aa6.09□□□□□ -1.43
CTNND1-237ENST00000534579 PRO0461Q9UI25 63 aa6.09□□□□□ -1.44
CTNND1-237ENST00000534579 TRAV22A0A0B4J277 110 aa6.08□□□□□ -1.44
CTNND1-237ENST00000534579 C9orf92A6NGG3 77 aa6.08□□□□□ -1.44
CTNND1-237ENST00000534579 EPM2AB3EWF7 344 aa6.08□□□□□ -1.44
CTNND1-237ENST00000534579 FAM19A4Q96LR4 140 aa6.07□□□□□ -1.44
CTNND1-237ENST00000534579 F8P00451 2351 aa6.07□□□□□ -1.44
CTNND1-237ENST00000534579 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
CTNND1-237ENST00000534579 CHD7Q9P2D1 2997 aa6.05□□□□□ -1.44
CTNND1-237ENST00000534579 LINC01554Q52M75 96 aa6.05□□□□□ -1.44
CTNND1-237ENST00000534579 RBM12B-AS1Q9P1G2 102 aa6.05□□□□□ -1.44
CTNND1-237ENST00000534579 IGLV5-37A0A075B6J1 123 aa6.04□□□□□ -1.44
CTNND1-237ENST00000534579 C5orf42Q9H799 3197 aa6.04□□□□□ -1.44
CTNND1-237ENST00000534579 SPATA3Q8NHX4 192 aa6.04□□□□□ -1.44
CTNND1-237ENST00000534579 LINC00476Q8WZB0 136 aa6.04□□□□□ -1.44
CTNND1-237ENST00000534579 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
CTNND1-237ENST00000534579 BCE1O60756 84 aa6.03□□□□□ -1.44
CTNND1-237ENST00000534579 PRRC2CQ9Y520 2896 aaKnown RBP6.02□□□□□ -1.45
CTNND1-237ENST00000534579 C4orf26Q17RF5 130 aa6.02□□□□□ -1.45
CTNND1-237ENST00000534579 A0A096LNT2 108 aa6.02□□□□□ -1.45
CTNND1-237ENST00000534579 SMR3BP02814 79 aaPredicted RBP6.02□□□□□ -1.45
CTNND1-237ENST00000534579 IGLV6-57P01721 117 aa6.02□□□□□ -1.45
CTNND1-237ENST00000534579 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
CTNND1-237ENST00000534579 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
CTNND1-237ENST00000534579 PCNTO95613 3336 aa6.01□□□□□ -1.45
CTNND1-237ENST00000534579 Q8NAQ8 132 aa6.01□□□□□ -1.45
CTNND1-237ENST00000534579 FLNBO75369 2602 aaKnown RBP6.01□□□□□ -1.45
CTNND1-237ENST00000534579 LINC00588Q9Y4M8 146 aa6.01□□□□□ -1.45
CTNND1-237ENST00000534579 H3BNG1 76 aa6□□□□□ -1.45
CTNND1-237ENST00000534579 HECTD1Q9ULT8 2610 aa6□□□□□ -1.45
CTNND1-237ENST00000534579 M0R2T5 61 aa6□□□□□ -1.45
CTNND1-237ENST00000534579 LINC01600Q96MT4 127 aa6□□□□□ -1.45
CTNND1-237ENST00000534579 DSCR10P59022 87 aa5.99□□□□□ -1.45
CTNND1-237ENST00000534579 KLK9Q2XQG4 91 aa5.99□□□□□ -1.45
CTNND1-237ENST00000534579 HTTP42858 3142 aa5.99□□□□□ -1.45
CTNND1-237ENST00000534579 Q6ZRX8 168 aa5.99□□□□□ -1.45
CTNND1-237ENST00000534579 IGHV3OR16-9A0A0B4J2B5 98 aa5.98□□□□□ -1.45
CTNND1-237ENST00000534579 ELOF1P60002 83 aaKnown RBP5.98□□□□□ -1.45
CTNND1-237ENST00000534579 OBSCN-AS1Q96MR7 158 aa5.98□□□□□ -1.45
CTNND1-237ENST00000534579 LOC101927531A0A1B0GV80 90 aa5.98□□□□□ -1.45
CTNND1-237ENST00000534579 C9orf129Q5T035 196 aaKnown RBP5.97□□□□□ -1.45
CTNND1-237ENST00000534579 H3BPC8 53 aa5.97□□□□□ -1.45
CTNND1-237ENST00000534579 IGLV5-39A0A0G2JS06 123 aa5.96□□□□□ -1.46
CTNND1-237ENST00000534579 BPTFQ12830 3046 aa5.96□□□□□ -1.46
CTNND1-237ENST00000534579 MRPL34Q9BQ48 92 aaKnown RBP5.95□□□□□ -1.46
CTNND1-237ENST00000534579 MUC4Q99102 2169 aa5.95□□□□□ -1.46
CTNND1-237ENST00000534579 KRTAP10-11P60412 298 aa5.95□□□□□ -1.46
CTNND1-237ENST00000534579 KRTAP10-3P60369 221 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms