RNA–Protein interactions for RNA: ENST00000534242.5

SHARPIN-209, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 2

Gene SHARPIN, Length 933 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-209ENST00000534242 SFTA2Q6UW10 78 aa13.16□□□□□ -0.3
SHARPIN-209ENST00000534242 CBLN2Q8IUK8 224 aa13.16□□□□□ -0.3
SHARPIN-209ENST00000534242 C3orf22Q8N5N4 141 aa13.16□□□□□ -0.3
SHARPIN-209ENST00000534242 C11orf86A6NJI1 115 aa13.15□□□□□ -0.3
SHARPIN-209ENST00000534242 C18orf32Q8TCD1 76 aa13.15□□□□□ -0.3
SHARPIN-209ENST00000534242 PMCHL1Q16048 86 aa13.14□□□□□ -0.31
SHARPIN-209ENST00000534242 TMEM170BQ5T4T1 132 aa13.14□□□□□ -0.31
SHARPIN-209ENST00000534242 HIGD2AQ9BW72 106 aa13.14□□□□□ -0.31
SHARPIN-209ENST00000534242 IFITM2Q01629 132 aa13.13□□□□□ -0.31
SHARPIN-209ENST00000534242 BAGE3Q86Y29 109 aa13.13□□□□□ -0.31
SHARPIN-209ENST00000534242 RPS10P5Q9NQ39 176 aa13.13□□□□□ -0.31
SHARPIN-209ENST00000534242 RHEBQ15382 184 aa13.12□□□□□ -0.31
SHARPIN-209ENST00000534242 TRAPPC1Q9Y5R8 145 aa13.11□□□□□ -0.31
SHARPIN-209ENST00000534242 LINC00158P58513 81 aa13.1□□□□□ -0.31
SHARPIN-209ENST00000534242 C10orf91Q5T1B1 145 aa13.1□□□□□ -0.31
SHARPIN-209ENST00000534242 COMMD7Q86VX2 200 aa13.1□□□□□ -0.31
SHARPIN-209ENST00000534242 SPRR4Q96PI1 79 aa13.09□□□□□ -0.31
SHARPIN-209ENST00000534242 PPDPFQ9H3Y8 114 aa13.09□□□□□ -0.31
SHARPIN-209ENST00000534242 SPAG11AQ6PDA7 123 aa13.08□□□□□ -0.32
SHARPIN-209ENST00000534242 A0A0U1RRA0 63 aa13.07□□□□□ -0.32
SHARPIN-209ENST00000534242 CHTOPQ9Y3Y2 248 aaKnown RBP13.07□□□□□ -0.32
SHARPIN-209ENST00000534242 ZNF706Q9Y5V0 76 aaPredicted RBP13.04□□□□□ -0.32
SHARPIN-209ENST00000534242 TMEM223A0PJW6 202 aa13.03□□□□□ -0.32
SHARPIN-209ENST00000534242 PRYO14603 147 aa13.01□□□□□ -0.33
SHARPIN-209ENST00000534242 SMIM13P0DJ93 91 aa13□□□□□ -0.33
SHARPIN-209ENST00000534242 C4orf48Q5BLP8 95 aa13□□□□□ -0.33
SHARPIN-209ENST00000534242 FP248Q71RG6 208 aaPredicted RBP13□□□□□ -0.33
SHARPIN-209ENST00000534242 BOD1L2Q8IYS8 172 aa13□□□□□ -0.33
SHARPIN-209ENST00000534242 SPRR1AP35321 89 aa12.99□□□□□ -0.33
SHARPIN-209ENST00000534242 LINC00337Q8N6G1 96 aa12.99□□□□□ -0.33
SHARPIN-209ENST00000534242 TRAV12-1A0A0B4J245 112 aa12.98□□□□□ -0.33
SHARPIN-209ENST00000534242 NCR3O14931 201 aa12.98□□□□□ -0.33
SHARPIN-209ENST00000534242 ATP6V1G1O75348 118 aa12.98□□□□□ -0.33
SHARPIN-209ENST00000534242 MEIG1Q5JSS6 88 aa12.98□□□□□ -0.33
SHARPIN-209ENST00000534242 DAND5Q8N907 189 aa12.98□□□□□ -0.33
SHARPIN-209ENST00000534242 Q8NBF4 154 aa12.98□□□□□ -0.33
SHARPIN-209ENST00000534242 MIR7-3HGQ8N6C7 128 aa12.97□□□□□ -0.33
SHARPIN-209ENST00000534242 KCNQ1DNQ9H478 68 aa12.97□□□□□ -0.33
SHARPIN-209ENST00000534242 SMCR5Q8TEV8 140 aa12.96□□□□□ -0.33
SHARPIN-209ENST00000534242 IFI27L1Q96BM0 104 aa12.96□□□□□ -0.33
SHARPIN-209ENST00000534242 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
SHARPIN-209ENST00000534242 ETDCA0A1B0GVM5 59 aa12.94□□□□□ -0.34
SHARPIN-209ENST00000534242 HERV-K104P63124 156 aa12.93□□□□□ -0.34
SHARPIN-209ENST00000534242 KRTAP13-3Q3SY46 172 aa12.93□□□□□ -0.34
SHARPIN-209ENST00000534242 CHCHD1Q96BP2 118 aaKnown RBP12.93□□□□□ -0.34
SHARPIN-209ENST00000534242 TRBV10-3A0A0K0K1G6 114 aa12.91□□□□□ -0.34
SHARPIN-209ENST00000534242 SPINK1P00995 79 aa12.91□□□□□ -0.34
SHARPIN-209ENST00000534242 LINC00483Q53H64 154 aa12.91□□□□□ -0.34
SHARPIN-209ENST00000534242 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
SHARPIN-209ENST00000534242 APOC3P02656 99 aa12.9□□□□□ -0.34
SHARPIN-209ENST00000534242 NDUFA12Q9UI09 145 aa12.89□□□□□ -0.35
SHARPIN-209ENST00000534242 MYMXA0A1B0GTQ4 84 aa12.87□□□□□ -0.35
SHARPIN-209ENST00000534242 SNAPINO95295 136 aa12.87□□□□□ -0.35
SHARPIN-209ENST00000534242 ASB16-AS1Q495Z4 193 aa12.87□□□□□ -0.35
SHARPIN-209ENST00000534242 GAGE2AQ6NT46 116 aa12.87□□□□□ -0.35
SHARPIN-209ENST00000534242 MAP1LC3CQ9BXW4 147 aa12.87□□□□□ -0.35
SHARPIN-209ENST00000534242 S100A12P80511 92 aa12.86□□□□□ -0.35
SHARPIN-209ENST00000534242 SVBPQ8N300 66 aa12.86□□□□□ -0.35
SHARPIN-209ENST00000534242 B5MCH6 92 aa12.85□□□□□ -0.35
SHARPIN-209ENST00000534242 KRTAP9-6A0A140TA67 174 aa12.84□□□□□ -0.35
SHARPIN-209ENST00000534242 MOBPQ13875 183 aa12.84□□□□□ -0.35
SHARPIN-209ENST00000534242 YPEL4Q96NS1 127 aa12.84□□□□□ -0.35
SHARPIN-209ENST00000534242 ERC2-IT1O76042 136 aa12.83□□□□□ -0.36
SHARPIN-209ENST00000534242 NDUFA5Q16718 116 aa12.83□□□□□ -0.36
SHARPIN-209ENST00000534242 FAM19A2Q8N3H0 131 aa12.83□□□□□ -0.36
SHARPIN-209ENST00000534242 IGLV9-49A0A0B4J1Y8 123 aa12.82□□□□□ -0.36
SHARPIN-209ENST00000534242 HSBP1O75506 76 aa12.82□□□□□ -0.36
SHARPIN-209ENST00000534242 TSPEAR-AS2P59090 65 aa12.82□□□□□ -0.36
SHARPIN-209ENST00000534242 LOC107984156A0A0G2JMH3 177 aa12.81□□□□□ -0.36
SHARPIN-209ENST00000534242 H0Y8G0 127 aa12.81□□□□□ -0.36
SHARPIN-209ENST00000534242 DDTP30046 118 aa12.81□□□□□ -0.36
SHARPIN-209ENST00000534242 RPS29P62273 56 aaKnown RBP12.81□□□□□ -0.36
SHARPIN-209ENST00000534242 ARL17AQ8IVW1 177 aa12.81□□□□□ -0.36
SHARPIN-209ENST00000534242 TRBV10-2A0A0K0K1G8 114 aa12.8□□□□□ -0.36
SHARPIN-209ENST00000534242 SSBP3-AS1Q7Z2R9 100 aa12.8□□□□□ -0.36
SHARPIN-209ENST00000534242 Q9BRP9 147 aa12.8□□□□□ -0.36
SHARPIN-209ENST00000534242 Q8N377 158 aa12.79□□□□□ -0.36
SHARPIN-209ENST00000534242 KRTAP4-1Q9BYQ7 146 aa12.79□□□□□ -0.36
SHARPIN-209ENST00000534242 LEPROTO15243 131 aa12.78□□□□□ -0.36
SHARPIN-209ENST00000534242 SEC61BP60468 96 aaKnown RBP12.78□□□□□ -0.36
SHARPIN-209ENST00000534242 Q6ZRX8 168 aa12.78□□□□□ -0.36
SHARPIN-209ENST00000534242 SPANXB1Q9NS25 103 aaPredicted RBP12.76□□□□□ -0.37
SHARPIN-209ENST00000534242 LINC01547P58512 204 aaPredicted RBP12.75□□□□□ -0.37
SHARPIN-209ENST00000534242 SLC25A20O43772 301 aa12.74□□□□□ -0.37
SHARPIN-209ENST00000534242 LEPROTL1O95214 131 aa12.74□□□□□ -0.37
SHARPIN-209ENST00000534242 J3QQQ9 107 aa12.73□□□□□ -0.37
SHARPIN-209ENST00000534242 MIEN1Q9BRT3 115 aa12.73□□□□□ -0.37
SHARPIN-209ENST00000534242 IGLV6-57P01721 117 aa12.72□□□□□ -0.37
SHARPIN-209ENST00000534242 PLNP26678 52 aa12.72□□□□□ -0.37
SHARPIN-209ENST00000534242 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
SHARPIN-209ENST00000534242 NDUFC2O95298 119 aa12.71□□□□□ -0.37
SHARPIN-209ENST00000534242 NMUP48645 174 aa12.7□□□□□ -0.38
SHARPIN-209ENST00000534242 LINC00310P59036 64 aa12.7□□□□□ -0.38
SHARPIN-209ENST00000534242 TRAV23DV6A0A075B6W5 121 aa12.69□□□□□ -0.38
SHARPIN-209ENST00000534242 HERVK_113P61574 105 aa12.69□□□□□ -0.38
SHARPIN-209ENST00000534242 JOSD1Q15040 202 aaPredicted RBP12.69□□□□□ -0.38
SHARPIN-209ENST00000534242 SERF1AO75920 110 aa12.68□□□□□ -0.38
SHARPIN-209ENST00000534242 LGALS3P17931 250 aaKnown RBP12.68□□□□□ -0.38
SHARPIN-209ENST00000534242 C9orf153Q5TBE3 101 aa12.68□□□□□ -0.38
SHARPIN-209ENST00000534242 DPM2O94777 84 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms