RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TINCRA0A1B0GVN0 87 aa12.3□□□□□ -0.44
SSH3-211ENST00000534112 FAM19A2Q8N3H0 131 aa12.3□□□□□ -0.44
SSH3-211ENST00000534112 IGKV2-28A0A075B6P5 120 aa12.29□□□□□ -0.44
SSH3-211ENST00000534112 IGKV2D-28P01615 120 aa12.29□□□□□ -0.44
SSH3-211ENST00000534112 IGLV5-45A0A087WSX0 123 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BKO60814 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BJP06899 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BOP23527 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BBP33778 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 NDUFA6P56556 154 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BDP58876 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BCP62807 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 CTAG1AP78358 180 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST2H2BEQ16778 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BHQ93079 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BNQ99877 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 HIST1H2BMQ99879 126 aa12.28□□□□□ -0.44
SSH3-211ENST00000534112 IFI27L1Q96BM0 104 aa12.27□□□□□ -0.45
SSH3-211ENST00000534112 IGLC3P0DOY3 106 aa12.26□□□□□ -0.45
SSH3-211ENST00000534112 PRLHP81277 87 aa12.26□□□□□ -0.45
SSH3-211ENST00000534112 SPINK8P0C7L1 97 aa12.25□□□□□ -0.45
SSH3-211ENST00000534112 PPDPFQ9H3Y8 114 aa12.24□□□□□ -0.45
SSH3-211ENST00000534112 FAM19A1Q7Z5A9 133 aa12.23□□□□□ -0.45
SSH3-211ENST00000534112 TRAV12-1A0A0B4J245 112 aa12.22□□□□□ -0.45
SSH3-211ENST00000534112 LEPROTL1O95214 131 aa12.22□□□□□ -0.45
SSH3-211ENST00000534112 TMEM126AQ9H061 195 aa12.22□□□□□ -0.45
SSH3-211ENST00000534112 TMEM238C9JI98 176 aa12.21□□□□□ -0.45
SSH3-211ENST00000534112 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.45
SSH3-211ENST00000534112 ZNF22P17026 224 aaPredicted RBP12.2□□□□□ -0.46
SSH3-211ENST00000534112 PFN2P35080 140 aa12.2□□□□□ -0.46
SSH3-211ENST00000534112 C3orf22Q8N5N4 141 aa12.2□□□□□ -0.46
SSH3-211ENST00000534112 CHTOPQ9Y3Y2 248 aaKnown RBP12.2□□□□□ -0.46
SSH3-211ENST00000534112 C11orf86A6NJI1 115 aa12.19□□□□□ -0.46
SSH3-211ENST00000534112 H3BRM9 83 aa12.19□□□□□ -0.46
SSH3-211ENST00000534112 VPREB1P12018 145 aa12.19□□□□□ -0.46
SSH3-211ENST00000534112 HSPB8Q9UJY1 196 aa12.18□□□□□ -0.46
SSH3-211ENST00000534112 M0R378 163 aa12.17□□□□□ -0.46
SSH3-211ENST00000534112 FABP4P15090 132 aa12.17□□□□□ -0.46
SSH3-211ENST00000534112 SND1-IT1Q9HBX3 110 aa12.17□□□□□ -0.46
SSH3-211ENST00000534112 COA6Q5JTJ3 125 aaKnown RBP12.16□□□□□ -0.46
SSH3-211ENST00000534112 SPAG11AQ6PDA7 123 aa12.16□□□□□ -0.46
SSH3-211ENST00000534112 IGLV5-39A0A0G2JS06 123 aa12.15□□□□□ -0.46
SSH3-211ENST00000534112 H0Y8G0 127 aa12.14□□□□□ -0.47
SSH3-211ENST00000534112 RPL24P83731 157 aaKnown RBP12.14□□□□□ -0.47
SSH3-211ENST00000534112 TMEM170BQ5T4T1 132 aa12.14□□□□□ -0.47
SSH3-211ENST00000534112 FP248Q71RG6 208 aaPredicted RBP12.13□□□□□ -0.47
SSH3-211ENST00000534112 Q8NDZ9 215 aa12.12□□□□□ -0.47
SSH3-211ENST00000534112 HIGD2AQ9BW72 106 aa12.12□□□□□ -0.47
SSH3-211ENST00000534112 ERG28Q9UKR5 140 aa12.12□□□□□ -0.47
SSH3-211ENST00000534112 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
SSH3-211ENST00000534112 COX17Q14061 63 aa12.1□□□□□ -0.47
SSH3-211ENST00000534112 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
SSH3-211ENST00000534112 TMEM223A0PJW6 202 aa12.09□□□□□ -0.47
SSH3-211ENST00000534112 SPRR4Q96PI1 79 aa12.09□□□□□ -0.47
SSH3-211ENST00000534112 KRTAP13-3Q3SY46 172 aa12.08□□□□□ -0.48
SSH3-211ENST00000534112 C4orf48Q5BLP8 95 aa12.08□□□□□ -0.48
SSH3-211ENST00000534112 ZNF625Q96I27 306 aaPredicted RBP12.08□□□□□ -0.48
SSH3-211ENST00000534112 ASB16-AS1Q495Z4 193 aa12.07□□□□□ -0.48
SSH3-211ENST00000534112 PLNP26678 52 aa12.06□□□□□ -0.48
SSH3-211ENST00000534112 LINC01547P58512 204 aaPredicted RBP12.06□□□□□ -0.48
SSH3-211ENST00000534112 PMCHL2Q9BQD1 86 aa12.06□□□□□ -0.48
SSH3-211ENST00000534112 SYS1-DBNDD2H3BUS1 97 aa12.05□□□□□ -0.48
SSH3-211ENST00000534112 DPM2O94777 84 aa12.05□□□□□ -0.48
SSH3-211ENST00000534112 IGKCP01834 107 aa12.03□□□□□ -0.48
SSH3-211ENST00000534112 DAND5Q8N907 189 aa12.03□□□□□ -0.48
SSH3-211ENST00000534112 Q8NBF4 154 aa12.03□□□□□ -0.48
SSH3-211ENST00000534112 KRTAP4-1Q9BYQ7 146 aa12.03□□□□□ -0.48
SSH3-211ENST00000534112 FSIP2Q5CZC0 6907 aa12.03□□□□□ -0.48
SSH3-211ENST00000534112 LCE2DQ5TA82 110 aaPredicted RBP12.02□□□□□ -0.49
SSH3-211ENST00000534112 ZNF706Q9Y5V0 76 aaPredicted RBP12.02□□□□□ -0.49
SSH3-211ENST00000534112 C3orf79P0CE67 100 aa12.01□□□□□ -0.49
SSH3-211ENST00000534112 LINC01545Q5VT33 79 aa12□□□□□ -0.49
SSH3-211ENST00000534112 SFTA2Q6UW10 78 aa12□□□□□ -0.49
SSH3-211ENST00000534112 PET117Q6UWS5 81 aa12□□□□□ -0.49
SSH3-211ENST00000534112 SPINK1P00995 79 aa11.98□□□□□ -0.49
SSH3-211ENST00000534112 SEC61BP60468 96 aaKnown RBP11.98□□□□□ -0.49
SSH3-211ENST00000534112 LINC00158P58513 81 aa11.97□□□□□ -0.49
SSH3-211ENST00000534112 HIST3H2BBQ8N257 126 aa11.97□□□□□ -0.49
SSH3-211ENST00000534112 LEPROTO15243 131 aa11.96□□□□□ -0.49
SSH3-211ENST00000534112 KRTDAPP60985 99 aa11.96□□□□□ -0.49
SSH3-211ENST00000534112 HERVK_113P61574 105 aa11.96□□□□□ -0.49
SSH3-211ENST00000534112 S100A6P06703 90 aa11.95□□□□□ -0.5
SSH3-211ENST00000534112 TSPEAR-AS2P59090 65 aa11.95□□□□□ -0.5
SSH3-211ENST00000534112 SMCR5Q8TEV8 140 aa11.95□□□□□ -0.5
SSH3-211ENST00000534112 A0A0U1RRA0 63 aa11.94□□□□□ -0.5
SSH3-211ENST00000534112 PRYO14603 147 aa11.93□□□□□ -0.5
SSH3-211ENST00000534112 NDUFA12Q9UI09 145 aa11.93□□□□□ -0.5
SSH3-211ENST00000534112 J3QQQ9 107 aa11.92□□□□□ -0.5
SSH3-211ENST00000534112 SPRR1AP35321 89 aa11.92□□□□□ -0.5
SSH3-211ENST00000534112 HIST1H2BLQ99880 126 aa11.92□□□□□ -0.5
SSH3-211ENST00000534112 E9PLD3 99 aa11.91□□□□□ -0.5
SSH3-211ENST00000534112 S100A2P29034 98 aa11.91□□□□□ -0.5
SSH3-211ENST00000534112 HERV-K104P63124 156 aa11.91□□□□□ -0.5
SSH3-211ENST00000534112 KCNQ1DNQ9H478 68 aa11.91□□□□□ -0.5
SSH3-211ENST00000534112 CRCT1Q9UGL9 99 aa11.91□□□□□ -0.5
SSH3-211ENST00000534112 MYMXA0A1B0GTQ4 84 aa11.9□□□□□ -0.5
SSH3-211ENST00000534112 LINC00483Q53H64 154 aa11.9□□□□□ -0.5
SSH3-211ENST00000534112 BOD1L2Q8IYS8 172 aa11.9□□□□□ -0.5
SSH3-211ENST00000534112 C20orf202A1L168 122 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms