RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SMAGPQ0VAQ4 97 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 TMEM78Q5T7P6 136 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 CFAP126Q5VTH2 177 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM104BQ5XKR9 115 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 REG3GQ6UW15 175 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM159AQ6UWV7 190 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 SCGB1D4Q6XE38 83 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 C2orf91Q6ZV80 131 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 ARL17AQ8IVW1 177 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 SPACA4Q8TDM5 124 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 SCGB3A1Q96QR1 104 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 KRTAP4-1Q9BYQ7 146 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 TTTY13Q9BZ97 58 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 PLAC8Q9NZF1 115 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 TMEM14CQ9P0S9 112 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 NEBP20929 6669 aa1.79□□□□□ -2.12
CHMP4A-208ENST00000534106 IGHV3-64A0A075B6Q5 118 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 IGKV2-24A0A0C4DH68 120 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 A0A1B0GWB2 263 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 ZNF815PA8K554 130 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 KRTAP16-1A8MUX0 517 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 H7C423 109 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 J3QR89 54 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 M0R2P5 195 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 APOMO95445 188 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 PPBPP02775 128 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 SCGB1C2P0DMR2 95 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 ZNF80P51504 273 aaPredicted RBP1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 COX6A2Q02221 97 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 FAM74A4Q5TZK3 123 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 KRTAP26-1Q6PEX3 210 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 CEND1Q8N111 149 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 C14orf178Q8N769 122 aaPredicted RBP1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 C7orf33Q8WU49 177 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 RMI2Q96E14 147 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 ODF3Q96PU9 254 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 SLC50A1Q9BRV3 221 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 JPT2Q9H910 190 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 NXT2Q9NPJ8 142 aaKnown RBP1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 CYSLTR1Q9Y271 337 aa1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 CHTOPQ9Y3Y2 248 aaKnown RBP1.78□□□□□ -2.12
CHMP4A-208ENST00000534106 MACF1Q9UPN3 7388 aaKnown RBP1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 IGLV10-54A0A075B6I4 117 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 IGKV2D-26A0A0A0MRZ7 120 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 TRBV6-1A0A0K0K1D8 114 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 A0A0U1RRA0 63 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 TRBV6-4A0A1B0GX49 114 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 FABP5P3A8MUU1 101 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 TMEM238C9JI98 176 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 TMEM262E9PQX1 116 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 LINC00694P0DN24 101 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 FGF6P10767 208 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 LGALS3P17931 250 aaKnown RBP1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 PLNP26678 52 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 CRIP1P50238 77 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 FXYD2P54710 66 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 RHOHQ15669 191 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 ZNF56Q15929 161 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 CLPSL2Q6UWE3 100 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 Q8N8P6 123 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 Q8NBF4 154 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 RPL39LQ96EH5 51 aaKnown RBP1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 MRPL53Q96EL3 112 aaKnown RBP1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 PRADC1Q9BSG0 188 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 CHCHD5Q9BSY4 110 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 MRPL35Q9NZE8 188 aaKnown RBP1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 PHLDA3Q9Y5J5 127 aa1.77□□□□□ -2.13
CHMP4A-208ENST00000534106 IGLV4-3A0A075B6K6 122 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 TRBV25-1A0A075B6N4 114 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 A0A087WX48 190 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 A0A096LNJ9 63 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 MYMXA0A1B0GTQ4 84 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 A0A1B0GV72 72 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 LINC01549A6NIU2 74 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 H3BMG7 143 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 CKS1BP61024 79 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 NPC2P61916 151 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 PDE6HQ13956 83 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 ORMDL2Q53FV1 153 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 TMEM170BQ5T4T1 132 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 LYRM7Q5U5X0 104 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 UFSP1Q6NVU6 142 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 BOD1L2Q8IYS8 172 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 PLEKHB2Q96CS7 222 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 MRAP2Q96G30 205 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 RNF185Q96GF1 192 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 SIGMAR1Q99720 223 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 SMIM2Q9BVW6 85 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 OCR1Q9BZK8 76 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 PSORS1C2Q9UIG4 136 aa1.76□□□□□ -2.13
CHMP4A-208ENST00000534106 A0A096LNI7 61 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 TRAV21A0A0B4J279 112 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 F8VRH5 84 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 F8WDY8 70 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 ANGP03950 147 aaKnown RBP1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 IGLC6P0CF74 106 aa1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 NDUFV3P56181 108 aaKnown RBP1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 CNBPP62633 177 aaKnown RBP1.75□□□□□ -2.13
CHMP4A-208ENST00000534106 ETDBQ3ZM63 59 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms