RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 Q6ZRN7 208 aaPredicted RBP5.53□□□□□ -1.52
NEDD8-207ENST00000533242 LINC00612Q8N6U2 182 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 CHCHD5Q9BSY4 110 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 TRAV26-1A0A087WT03 109 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 MEIG1Q5JSS6 88 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 Q8N3U1 123 aa5.53□□□□□ -1.52
NEDD8-207ENST00000533242 GYPEP15421 78 aa5.52□□□□□ -1.53
NEDD8-207ENST00000533242 C5orf38Q86SI9 138 aa5.52□□□□□ -1.53
NEDD8-207ENST00000533242 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
NEDD8-207ENST00000533242 TRBV10-2A0A0K0K1G8 114 aa5.52□□□□□ -1.53
NEDD8-207ENST00000533242 LST1O00453 97 aa5.52□□□□□ -1.53
NEDD8-207ENST00000533242 CIRBPQ14011 172 aaKnown RBP5.52□□□□□ -1.53
NEDD8-207ENST00000533242 CLPSL2Q6UWE3 100 aa5.52□□□□□ -1.53
NEDD8-207ENST00000533242 COX7B2Q8TF08 81 aa5.51□□□□□ -1.53
NEDD8-207ENST00000533242 M0QXV9 152 aa5.51□□□□□ -1.53
NEDD8-207ENST00000533242 KRTAP10-1P60331 282 aa5.51□□□□□ -1.53
NEDD8-207ENST00000533242 MIR7-3HGQ8N6C7 128 aa5.51□□□□□ -1.53
NEDD8-207ENST00000533242 IGKV2-28A0A075B6P5 120 aa5.5□□□□□ -1.53
NEDD8-207ENST00000533242 LINC00959A0A1B0GUT2 108 aa5.5□□□□□ -1.53
NEDD8-207ENST00000533242 IGKV2D-28P01615 120 aa5.5□□□□□ -1.53
NEDD8-207ENST00000533242 LINC01600Q96MT4 127 aa5.5□□□□□ -1.53
NEDD8-207ENST00000533242 FAM218AQ96MZ4 157 aa5.5□□□□□ -1.53
NEDD8-207ENST00000533242 VPS13BQ7Z7G8 4022 aa5.5□□□□□ -1.53
NEDD8-207ENST00000533242 CIDEAO60543 219 aa5.49□□□□□ -1.53
NEDD8-207ENST00000533242 FUSP35637 526 aaKnown RBP eCLIP5.49□□□□□ -1.53
NEDD8-207ENST00000533242 C2orf82Q6UX34 121 aa5.49□□□□□ -1.53
NEDD8-207ENST00000533242 LINC00337Q8N6G1 96 aa5.49□□□□□ -1.53
NEDD8-207ENST00000533242 A0A087WZ39 114 aa5.49□□□□□ -1.53
NEDD8-207ENST00000533242 FAM229AH3BQW9 127 aa5.49□□□□□ -1.53
NEDD8-207ENST00000533242 XCL1P47992 114 aa5.49□□□□□ -1.53
NEDD8-207ENST00000533242 HERV-K104P63124 156 aa5.49□□□□□ -1.53
NEDD8-207ENST00000533242 COX6CP09669 75 aa5.48□□□□□ -1.53
NEDD8-207ENST00000533242 A0A087WTM6 91 aa5.48□□□□□ -1.53
NEDD8-207ENST00000533242 TMEM262E9PQX1 116 aa5.48□□□□□ -1.53
NEDD8-207ENST00000533242 PRO0255Q9UI72 69 aa5.48□□□□□ -1.53
NEDD8-207ENST00000533242 C22orf24Q9Y442 160 aa5.48□□□□□ -1.53
NEDD8-207ENST00000533242 TRAV8-4A0A0B4J246 113 aa5.47□□□□□ -1.53
NEDD8-207ENST00000533242 COX7A2LO14548 114 aa5.47□□□□□ -1.53
NEDD8-207ENST00000533242 LCE2BO14633 110 aa5.47□□□□□ -1.53
NEDD8-207ENST00000533242 SMR3BP02814 79 aaPredicted RBP5.47□□□□□ -1.53
NEDD8-207ENST00000533242 SCGB1A1P11684 91 aa5.47□□□□□ -1.53
NEDD8-207ENST00000533242 PFN2P35080 140 aa5.47□□□□□ -1.53
NEDD8-207ENST00000533242 UBE2WQ96B02 151 aa5.47□□□□□ -1.53
NEDD8-207ENST00000533242 LINC00158P58513 81 aa5.47□□□□□ -1.53
NEDD8-207ENST00000533242 H3BT86 120 aa5.46□□□□□ -1.54
NEDD8-207ENST00000533242 PAX4O43316 350 aa5.46□□□□□ -1.54
NEDD8-207ENST00000533242 DNAH10OSP0CZ25 163 aa5.46□□□□□ -1.54
NEDD8-207ENST00000533242 SND1-IT1Q9HBX3 110 aa5.46□□□□□ -1.54
NEDD8-207ENST00000533242 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.54
NEDD8-207ENST00000533242 A0A1B0GUV1 79 aa5.45□□□□□ -1.54
NEDD8-207ENST00000533242 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
NEDD8-207ENST00000533242 FLG2Q5D862 2391 aaPredicted RBP5.45□□□□□ -1.54
NEDD8-207ENST00000533242 Q9HAA7 133 aa5.45□□□□□ -1.54
NEDD8-207ENST00000533242 KRTAP29-1A8MX34 341 aaPredicted RBP5.44□□□□□ -1.54
NEDD8-207ENST00000533242 SVIPQ8NHG7 77 aa5.44□□□□□ -1.54
NEDD8-207ENST00000533242 SMIM11BQ8TCY0 68 aa5.44□□□□□ -1.54
NEDD8-207ENST00000533242 A0A087WYN8 130 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 IBA57-AS1B1ANH7 110 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 CRPP02741 224 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 PRR3P79522 188 aaKnown RBP5.43□□□□□ -1.54
NEDD8-207ENST00000533242 C6orf226Q5I0X4 101 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 MYCBP2O75592 4640 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 RPL28P46779 137 aaKnown RBP5.43□□□□□ -1.54
NEDD8-207ENST00000533242 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
NEDD8-207ENST00000533242 C9orf129Q5T035 196 aaKnown RBP5.43□□□□□ -1.54
NEDD8-207ENST00000533242 LYPD5Q6UWN5 251 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 Q8NDZ9 215 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 COPS9Q8WXC6 57 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 PPDPFQ9H3Y8 114 aa5.43□□□□□ -1.54
NEDD8-207ENST00000533242 SS18Q15532 418 aa5.42□□□□□ -1.54
NEDD8-207ENST00000533242 IGLV5-52A0A0A0MRZ9 124 aa5.42□□□□□ -1.54
NEDD8-207ENST00000533242 TRAV13-2A0A0B4J235 113 aa5.42□□□□□ -1.54
NEDD8-207ENST00000533242 ANGP03950 147 aaKnown RBP5.42□□□□□ -1.54
NEDD8-207ENST00000533242 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
NEDD8-207ENST00000533242 CKS1BP61024 79 aa5.42□□□□□ -1.54
NEDD8-207ENST00000533242 HAMPP81172 84 aa5.42□□□□□ -1.54
NEDD8-207ENST00000533242 SERTAD4-AS1Q5TG53 156 aa5.42□□□□□ -1.54
NEDD8-207ENST00000533242 CHCHD10Q8WYQ3 142 aaPredicted RBP5.42□□□□□ -1.54
NEDD8-207ENST00000533242 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
NEDD8-207ENST00000533242 TRACP01848 142 aa5.41□□□□□ -1.54
NEDD8-207ENST00000533242 BAALC-AS2P0C853 105 aa5.41□□□□□ -1.54
NEDD8-207ENST00000533242 REG3AQ06141 175 aa5.41□□□□□ -1.54
NEDD8-207ENST00000533242 MRPL23Q16540 153 aaKnown RBP5.41□□□□□ -1.54
NEDD8-207ENST00000533242 Q8IZM0 81 aa5.41□□□□□ -1.54
NEDD8-207ENST00000533242 FAT1Q14517 4588 aa5.41□□□□□ -1.54
NEDD8-207ENST00000533242 LRCOL1A6NCL2 159 aa5.4□□□□□ -1.55
NEDD8-207ENST00000533242 C10orf25Q5T742 122 aa5.4□□□□□ -1.55
NEDD8-207ENST00000533242 CD164L2Q6UWJ8 174 aa5.4□□□□□ -1.55
NEDD8-207ENST00000533242 SMCR5Q8TEV8 140 aa5.4□□□□□ -1.55
NEDD8-207ENST00000533242 WFDC10BQ8IUB3 73 aa5.39□□□□□ -1.55
NEDD8-207ENST00000533242 OR13C6PQ8NH95 151 aa5.39□□□□□ -1.55
NEDD8-207ENST00000533242 SRRM2Q9UQ35 2752 aaKnown RBP5.39□□□□□ -1.55
NEDD8-207ENST00000533242 SNCGO76070 127 aa5.39□□□□□ -1.55
NEDD8-207ENST00000533242 SLPIP03973 132 aa5.39□□□□□ -1.55
NEDD8-207ENST00000533242 A0A1B0GV72 72 aa5.38□□□□□ -1.55
NEDD8-207ENST00000533242 FAM30AQ9NZY2 134 aa5.38□□□□□ -1.55
NEDD8-207ENST00000533242 FAM240AA0A1B0GVK7 77 aa5.37□□□□□ -1.55
NEDD8-207ENST00000533242 LECT2O14960 151 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms