RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 SRSF9Q13242 221 aaKnown RBP eCLIP11.21□□□□□ -0.62
CTSB-222ENST00000531551 A0A087WYN8 130 aa11.2□□□□□ -0.62
CTSB-222ENST00000531551 Q6ZSA8 131 aa11.2□□□□□ -0.62
CTSB-222ENST00000531551 FAM19A5Q7Z5A7 132 aaPredicted RBP11.2□□□□□ -0.62
CTSB-222ENST00000531551 UQCR10Q9UDW1 63 aa11.2□□□□□ -0.62
CTSB-222ENST00000531551 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
CTSB-222ENST00000531551 A0A1W2PNN7 141 aa11.19□□□□□ -0.62
CTSB-222ENST00000531551 SPANXDQ9BXN6 97 aa11.19□□□□□ -0.62
CTSB-222ENST00000531551 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
CTSB-222ENST00000531551 SERTAD4-AS1Q5TG53 156 aa11.18□□□□□ -0.62
CTSB-222ENST00000531551 C2orf91Q6ZV80 131 aa11.18□□□□□ -0.62
CTSB-222ENST00000531551 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
CTSB-222ENST00000531551 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
CTSB-222ENST00000531551 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
CTSB-222ENST00000531551 SCXQ7RTU7 201 aa11.17□□□□□ -0.62
CTSB-222ENST00000531551 CIRBP-AS1Q8TBR5 109 aa11.17□□□□□ -0.62
CTSB-222ENST00000531551 HIST1H4GQ99525 98 aa11.17□□□□□ -0.62
CTSB-222ENST00000531551 SPANXB1Q9NS25 103 aaPredicted RBP11.17□□□□□ -0.62
CTSB-222ENST00000531551 Q6ZVH6 145 aa11.16□□□□□ -0.62
CTSB-222ENST00000531551 MUSTN1Q8IVN3 82 aa11.16□□□□□ -0.62
CTSB-222ENST00000531551 HIGD1BQ9P298 99 aa11.16□□□□□ -0.62
CTSB-222ENST00000531551 RPL24P83731 157 aaKnown RBP11.15□□□□□ -0.63
CTSB-222ENST00000531551 Q8NDZ9 215 aa11.15□□□□□ -0.63
CTSB-222ENST00000531551 TSTD3H0UI37 97 aa11.14□□□□□ -0.63
CTSB-222ENST00000531551 KRTAP7-1Q8IUC3 87 aa11.14□□□□□ -0.63
CTSB-222ENST00000531551 PLAC8Q9NZF1 115 aa11.14□□□□□ -0.63
CTSB-222ENST00000531551 M0QXV9 152 aa11.13□□□□□ -0.63
CTSB-222ENST00000531551 IFITM1P13164 125 aa11.13□□□□□ -0.63
CTSB-222ENST00000531551 HNRNPA3P51991 378 aaKnown RBP11.13□□□□□ -0.63
CTSB-222ENST00000531551 PRR3P79522 188 aaKnown RBP11.13□□□□□ -0.63
CTSB-222ENST00000531551 NKAPP1Q8N9T2 125 aa11.13□□□□□ -0.63
CTSB-222ENST00000531551 COPS9Q8WXC6 57 aa11.13□□□□□ -0.63
CTSB-222ENST00000531551 LOC107984156A0A0G2JMH3 177 aa11.12□□□□□ -0.63
CTSB-222ENST00000531551 XGP55808 180 aa11.12□□□□□ -0.63
CTSB-222ENST00000531551 ARL17AQ8IVW1 177 aa11.12□□□□□ -0.63
CTSB-222ENST00000531551 PLA2G2DQ9UNK4 145 aa11.12□□□□□ -0.63
CTSB-222ENST00000531551 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
CTSB-222ENST00000531551 NCR3O14931 201 aa11.12□□□□□ -0.63
CTSB-222ENST00000531551 VPREB1P12018 145 aa11.12□□□□□ -0.63
CTSB-222ENST00000531551 PHF5AQ7RTV0 110 aaKnown RBP11.12□□□□□ -0.63
CTSB-222ENST00000531551 GAGE10A6NGK3 116 aa11.1□□□□□ -0.63
CTSB-222ENST00000531551 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
CTSB-222ENST00000531551 NDUFC2O95298 119 aa11.08□□□□□ -0.64
CTSB-222ENST00000531551 IGLV5-37A0A075B6J1 123 aa11.07□□□□□ -0.64
CTSB-222ENST00000531551 UBE2BP63146 152 aa11.07□□□□□ -0.64
CTSB-222ENST00000531551 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
CTSB-222ENST00000531551 CDK2AP2O75956 126 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 SMR3BP02814 79 aaPredicted RBP11.06□□□□□ -0.64
CTSB-222ENST00000531551 TAL2Q16559 108 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 LBHQ53QV2 105 aaPredicted RBP11.06□□□□□ -0.64
CTSB-222ENST00000531551 C7orf33Q8WU49 177 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 A4D1N5 150 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 RPL37AP8A6NKH3 93 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 EPM2AB3EWF7 344 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 HSD52Q0P140 79 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 CEND1Q8N111 149 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 LINC00167Q96N53 147 aa11.06□□□□□ -0.64
CTSB-222ENST00000531551 RYR1P21817 5038 aa11.05□□□□□ -0.64
CTSB-222ENST00000531551 M0R378 163 aa11.05□□□□□ -0.64
CTSB-222ENST00000531551 PPDPFQ9H3Y8 114 aa11.04□□□□□ -0.64
CTSB-222ENST00000531551 HSPG2P98160 4391 aa11.04□□□□□ -0.64
CTSB-222ENST00000531551 KIAA1109Q2LD37 5005 aa11.04□□□□□ -0.64
CTSB-222ENST00000531551 IGKV2-28A0A075B6P5 120 aa11.04□□□□□ -0.64
CTSB-222ENST00000531551 IGKV2D-28P01615 120 aa11.04□□□□□ -0.64
CTSB-222ENST00000531551 S100A7L2Q5SY68 101 aa11.04□□□□□ -0.64
CTSB-222ENST00000531551 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
CTSB-222ENST00000531551 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
CTSB-222ENST00000531551 FAT1Q14517 4588 aa11.01□□□□□ -0.65
CTSB-222ENST00000531551 FXYD2P54710 66 aa11.01□□□□□ -0.65
CTSB-222ENST00000531551 A6NDN8 102 aa11□□□□□ -0.65
CTSB-222ENST00000531551 DDTP30046 118 aa11□□□□□ -0.65
CTSB-222ENST00000531551 TRBV10-3A0A0K0K1G6 114 aa11□□□□□ -0.65
CTSB-222ENST00000531551 KRTAP11-1Q8IUC1 163 aa11□□□□□ -0.65
CTSB-222ENST00000531551 LINC00337Q8N6G1 96 aa11□□□□□ -0.65
CTSB-222ENST00000531551 TMEM238LA0A1B0GVL6 79 aa10.99□□□□□ -0.65
CTSB-222ENST00000531551 A6NJY4 79 aa10.99□□□□□ -0.65
CTSB-222ENST00000531551 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
CTSB-222ENST00000531551 IGLV1-50A0A075B6I6 118 aa10.98□□□□□ -0.65
CTSB-222ENST00000531551 HINT1P49773 126 aaPredicted RBP10.98□□□□□ -0.65
CTSB-222ENST00000531551 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.65
CTSB-222ENST00000531551 RAB37Q96AX2 223 aa10.96□□□□□ -0.65
CTSB-222ENST00000531551 TMEM126AQ9H061 195 aa10.96□□□□□ -0.65
CTSB-222ENST00000531551 PCP4L1A6NKN8 68 aa10.95□□□□□ -0.66
CTSB-222ENST00000531551 IGLV6-57P01721 117 aa10.95□□□□□ -0.66
CTSB-222ENST00000531551 CFC1BP0CG36 223 aa10.95□□□□□ -0.66
CTSB-222ENST00000531551 CFC1P0CG37 223 aa10.95□□□□□ -0.66
CTSB-222ENST00000531551 BVES-AS1Q5T3Y7 98 aa10.95□□□□□ -0.66
CTSB-222ENST00000531551 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
CTSB-222ENST00000531551 PSORS1C2Q9UIG4 136 aa10.95□□□□□ -0.66
CTSB-222ENST00000531551 M0R143 59 aa10.93□□□□□ -0.66
CTSB-222ENST00000531551 C1orf137Q5JT78 98 aa10.93□□□□□ -0.66
CTSB-222ENST00000531551 TRAV23DV6A0A075B6W5 121 aa10.93□□□□□ -0.66
CTSB-222ENST00000531551 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
CTSB-222ENST00000531551 VPS13BQ7Z7G8 4022 aa10.92□□□□□ -0.66
CTSB-222ENST00000531551 FAM229AH3BQW9 127 aa10.92□□□□□ -0.66
CTSB-222ENST00000531551 RPL13AP40429 203 aaKnown RBP10.92□□□□□ -0.66
CTSB-222ENST00000531551 BATFQ16520 125 aa10.92□□□□□ -0.66
CTSB-222ENST00000531551 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
CTSB-222ENST00000531551 A0A0B4J2C4 111 aa10.91□□□□□ -0.66
CTSB-222ENST00000531551 H7C2G1 150 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms