RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 LINC00308Q8TCZ7 52 aa12.16□□□□□ -0.46
SMPD1-205ENST00000531303 MUSTN1Q8IVN3 82 aa12.15□□□□□ -0.46
SMPD1-205ENST00000531303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.15□□□□□ -0.46
SMPD1-205ENST00000531303 FAM168BA1KXE4 195 aa12.14□□□□□ -0.47
SMPD1-205ENST00000531303 Q6ZVH6 145 aa12.13□□□□□ -0.47
SMPD1-205ENST00000531303 FAM30AQ9NZY2 134 aa12.12□□□□□ -0.47
SMPD1-205ENST00000531303 IFITM1P13164 125 aa12.11□□□□□ -0.47
SMPD1-205ENST00000531303 CTAG1AP78358 180 aa12.11□□□□□ -0.47
SMPD1-205ENST00000531303 SPACA4Q8TDM5 124 aa12.11□□□□□ -0.47
SMPD1-205ENST00000531303 LINC00474Q9P2X8 69 aa12.11□□□□□ -0.47
SMPD1-205ENST00000531303 DDTP30046 118 aa12.1□□□□□ -0.47
SMPD1-205ENST00000531303 FAM19A5Q7Z5A7 132 aaPredicted RBP12.1□□□□□ -0.47
SMPD1-205ENST00000531303 Q8NDZ9 215 aa12.1□□□□□ -0.47
SMPD1-205ENST00000531303 A0A1W2PNN7 141 aa12.09□□□□□ -0.47
SMPD1-205ENST00000531303 PCP4L1A6NKN8 68 aa12.09□□□□□ -0.47
SMPD1-205ENST00000531303 PRR3P79522 188 aaKnown RBP12.09□□□□□ -0.47
SMPD1-205ENST00000531303 HSD52Q0P140 79 aa12.09□□□□□ -0.47
SMPD1-205ENST00000531303 SERTAD4-AS1Q5TG53 156 aa12.09□□□□□ -0.47
SMPD1-205ENST00000531303 COPS9Q8WXC6 57 aa12.09□□□□□ -0.47
SMPD1-205ENST00000531303 PKHD1P08F94 4074 aa12.09□□□□□ -0.47
SMPD1-205ENST00000531303 TAL2Q16559 108 aa12.08□□□□□ -0.47
SMPD1-205ENST00000531303 LOC107984156A0A0G2JMH3 177 aa12.08□□□□□ -0.48
SMPD1-205ENST00000531303 ARL17AQ8IVW1 177 aa12.08□□□□□ -0.48
SMPD1-205ENST00000531303 CEND1Q8N111 149 aa12.08□□□□□ -0.48
SMPD1-205ENST00000531303 HAMPP81172 84 aa12.07□□□□□ -0.48
SMPD1-205ENST00000531303 RPL24P83731 157 aaKnown RBP12.07□□□□□ -0.48
SMPD1-205ENST00000531303 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
SMPD1-205ENST00000531303 A0A087WYN8 130 aa12.06□□□□□ -0.48
SMPD1-205ENST00000531303 A4D1N5 150 aa12.06□□□□□ -0.48
SMPD1-205ENST00000531303 NCR3O14931 201 aa12.06□□□□□ -0.48
SMPD1-205ENST00000531303 VPREB1P12018 145 aa12.06□□□□□ -0.48
SMPD1-205ENST00000531303 KRTAP7-1Q8IUC3 87 aa12.06□□□□□ -0.48
SMPD1-205ENST00000531303 HINT1P49773 126 aaPredicted RBP12.04□□□□□ -0.48
SMPD1-205ENST00000531303 FXYD2P54710 66 aa12.04□□□□□ -0.48
SMPD1-205ENST00000531303 NKAPP1Q8N9T2 125 aa12.04□□□□□ -0.48
SMPD1-205ENST00000531303 Q6ZSA8 131 aa12.03□□□□□ -0.48
SMPD1-205ENST00000531303 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
SMPD1-205ENST00000531303 DNAH8Q96JB1 4490 aa12.03□□□□□ -0.48
SMPD1-205ENST00000531303 GAGE10A6NGK3 116 aa12.02□□□□□ -0.48
SMPD1-205ENST00000531303 C22orf24Q9Y442 160 aa12.02□□□□□ -0.48
SMPD1-205ENST00000531303 LRP1BQ9NZR2 4599 aa12.02□□□□□ -0.49
SMPD1-205ENST00000531303 M0QXV9 152 aa12.02□□□□□ -0.49
SMPD1-205ENST00000531303 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
SMPD1-205ENST00000531303 NDUFC2O95298 119 aa12.01□□□□□ -0.49
SMPD1-205ENST00000531303 SCXQ7RTU7 201 aa12.01□□□□□ -0.49
SMPD1-205ENST00000531303 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
SMPD1-205ENST00000531303 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
SMPD1-205ENST00000531303 IGKV2D-28P01615 120 aa12□□□□□ -0.49
SMPD1-205ENST00000531303 BVES-AS1Q5T3Y7 98 aa12□□□□□ -0.49
SMPD1-205ENST00000531303 PHF5AQ7RTV0 110 aaKnown RBP12□□□□□ -0.49
SMPD1-205ENST00000531303 PLAC8Q9NZF1 115 aa12□□□□□ -0.49
SMPD1-205ENST00000531303 IGLV5-37A0A075B6J1 123 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 TMEM238LA0A1B0GVL6 79 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 A6NJY4 79 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 M0R143 59 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 M0R378 163 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 BATFQ16520 125 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 MRPL55Q7Z7F7 128 aaKnown RBP11.98□□□□□ -0.49
SMPD1-205ENST00000531303 OR13C6PQ8NH95 151 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 C7orf33Q8WU49 177 aa11.98□□□□□ -0.49
SMPD1-205ENST00000531303 NHP2Q9NX24 153 aaKnown RBP11.97□□□□□ -0.49
SMPD1-205ENST00000531303 EPPK1P58107 5090 aaKnown RBP11.96□□□□□ -0.49
SMPD1-205ENST00000531303 A6NDN8 102 aa11.96□□□□□ -0.49
SMPD1-205ENST00000531303 RPL37AP8A6NKH3 93 aa11.96□□□□□ -0.49
SMPD1-205ENST00000531303 LINC00337Q8N6G1 96 aa11.96□□□□□ -0.49
SMPD1-205ENST00000531303 LINC00167Q96N53 147 aa11.96□□□□□ -0.49
SMPD1-205ENST00000531303 CFC1BP0CG36 223 aa11.95□□□□□ -0.5
SMPD1-205ENST00000531303 CFC1P0CG37 223 aa11.95□□□□□ -0.5
SMPD1-205ENST00000531303 S100A7L2Q5SY68 101 aa11.95□□□□□ -0.5
SMPD1-205ENST00000531303 TRBV10-2A0A0K0K1G8 114 aa11.95□□□□□ -0.5
SMPD1-205ENST00000531303 RAB37Q96AX2 223 aa11.95□□□□□ -0.5
SMPD1-205ENST00000531303 K7ERJ3 54 aa11.94□□□□□ -0.5
SMPD1-205ENST00000531303 UBE2BP63146 152 aa11.94□□□□□ -0.5
SMPD1-205ENST00000531303 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
SMPD1-205ENST00000531303 TRBV10-3A0A0K0K1G6 114 aa11.93□□□□□ -0.5
SMPD1-205ENST00000531303 EPM2AB3EWF7 344 aa11.93□□□□□ -0.5
SMPD1-205ENST00000531303 XGP55808 180 aa11.93□□□□□ -0.5
SMPD1-205ENST00000531303 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
SMPD1-205ENST00000531303 H7C2G1 150 aa11.91□□□□□ -0.5
SMPD1-205ENST00000531303 A0A0B4J2C4 111 aa11.9□□□□□ -0.5
SMPD1-205ENST00000531303 RPL13AP40429 203 aaKnown RBP11.9□□□□□ -0.5
SMPD1-205ENST00000531303 KRTAP11-1Q8IUC1 163 aa11.89□□□□□ -0.51
SMPD1-205ENST00000531303 IGLV1-50A0A075B6I6 118 aa11.89□□□□□ -0.51
SMPD1-205ENST00000531303 IGLV6-57P01721 117 aa11.89□□□□□ -0.51
SMPD1-205ENST00000531303 TMEM126AQ9H061 195 aa11.89□□□□□ -0.51
SMPD1-205ENST00000531303 APOBP04114 4563 aaKnown RBP11.88□□□□□ -0.51
SMPD1-205ENST00000531303 SNHG12Q9BXW3 62 aa11.88□□□□□ -0.51
SMPD1-205ENST00000531303 PRO1854Q9UHT4 67 aa11.88□□□□□ -0.51
SMPD1-205ENST00000531303 A0A1B0GWB2 263 aa11.86□□□□□ -0.51
SMPD1-205ENST00000531303 SMR3BP02814 79 aaPredicted RBP11.86□□□□□ -0.51
SMPD1-205ENST00000531303 Q1RN00 199 aa11.85□□□□□ -0.51
SMPD1-205ENST00000531303 TRAV23DV6A0A075B6W5 121 aa11.84□□□□□ -0.51
SMPD1-205ENST00000531303 SMIM11BQ8TCY0 68 aa11.83□□□□□ -0.52
SMPD1-205ENST00000531303 KCNQ1DNQ9H478 68 aa11.83□□□□□ -0.52
SMPD1-205ENST00000531303 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
SMPD1-205ENST00000531303 REG3GQ6UW15 175 aa11.82□□□□□ -0.52
SMPD1-205ENST00000531303 PRYO14603 147 aa11.81□□□□□ -0.52
SMPD1-205ENST00000531303 PSORS1C2Q9UIG4 136 aa11.81□□□□□ -0.52
SMPD1-205ENST00000531303 ZNF73O43830 326 aaPredicted RBP11.79□□□□□ -0.52
SMPD1-205ENST00000531303 TSPAN13O95857 204 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms