RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	LBH	Q53QV2	105 aa	Predicted RBP	13.37	□□□□□ -0.27
PABPC4-225	ENST00000531243	NKAPP1	Q8N9T2	125 aa		13.37	□□□□□ -0.27
PABPC4-225	ENST00000531243	APOB	P04114	4563 aa	Known RBP	13.36	□□□□□ -0.27
PABPC4-225	ENST00000531243		Q5VSD8	79 aa		13.36	□□□□□ -0.27
PABPC4-225	ENST00000531243	TP73-AS1	Q9UF72	201 aa		13.36	□□□□□ -0.27
PABPC4-225	ENST00000531243	KIAA1109	Q2LD37	5005 aa		13.36	□□□□□ -0.27
PABPC4-225	ENST00000531243	SERTAD4-AS1	Q5TG53	156 aa		13.35	□□□□□ -0.27
PABPC4-225	ENST00000531243	TTTY13	Q9BZ97	58 aa		13.35	□□□□□ -0.27
PABPC4-225	ENST00000531243	C22orf24	Q9Y442	160 aa		13.35	□□□□□ -0.27
PABPC4-225	ENST00000531243	TMEM238	C9JI98	176 aa		13.34	□□□□□ -0.27
PABPC4-225	ENST00000531243	RPL37A	P61513	92 aa	Known RBP	13.34	□□□□□ -0.27
PABPC4-225	ENST00000531243	UBE2B	P63146	152 aa		13.34	□□□□□ -0.27
PABPC4-225	ENST00000531243	PHF5A	Q7RTV0	110 aa	Known RBP	13.34	□□□□□ -0.27
PABPC4-225	ENST00000531243	VAMP8	Q9BV40	100 aa		13.34	□□□□□ -0.27
PABPC4-225	ENST00000531243	IGLV5-37	A0A075B6J1	123 aa		13.33	□□□□□ -0.28
PABPC4-225	ENST00000531243	PCP2	Q8IVA1	136 aa		13.33	□□□□□ -0.28
PABPC4-225	ENST00000531243	RYR1	P21817	5038 aa		13.33	□□□□□ -0.28
PABPC4-225	ENST00000531243	MRPL55	Q7Z7F7	128 aa	Known RBP	13.32	□□□□□ -0.28
PABPC4-225	ENST00000531243	DAND5	Q8N907	189 aa		13.32	□□□□□ -0.28
PABPC4-225	ENST00000531243	LOC107984156	A0A0G2JMH3	177 aa		13.31	□□□□□ -0.28
PABPC4-225	ENST00000531243	ARL17A	Q8IVW1	177 aa		13.31	□□□□□ -0.28
PABPC4-225	ENST00000531243	BOD1L2	Q8IYS8	172 aa		13.31	□□□□□ -0.28
PABPC4-225	ENST00000531243	COPS9	Q8WXC6	57 aa		13.31	□□□□□ -0.28
PABPC4-225	ENST00000531243	KRTAP7-1	Q8IUC3	87 aa		13.3	□□□□□ -0.28
PABPC4-225	ENST00000531243	VPREB1	P12018	145 aa		13.29	□□□□□ -0.28
PABPC4-225	ENST00000531243	SPATA45	Q537H7	98 aa		13.29	□□□□□ -0.28
PABPC4-225	ENST00000531243	PYY3	Q5JQD4	70 aa		13.29	□□□□□ -0.28
PABPC4-225	ENST00000531243	PAM16	Q9Y3D7	125 aa		13.29	□□□□□ -0.28
PABPC4-225	ENST00000531243	ADAMTSL4-AS1	Q5T5F5	129 aa		13.28	□□□□□ -0.28
PABPC4-225	ENST00000531243		Q6ZVH6	145 aa		13.28	□□□□□ -0.28
PABPC4-225	ENST00000531243	LITAF	Q99732	161 aa		13.27	□□□□□ -0.29
PABPC4-225	ENST00000531243	COX8A	P10176	69 aa		13.26	□□□□□ -0.29
PABPC4-225	ENST00000531243	SPANXD	Q9BXN6	97 aa		13.26	□□□□□ -0.29
PABPC4-225	ENST00000531243	SPANXC	Q9NY87	97 aa		13.26	□□□□□ -0.29
PABPC4-225	ENST00000531243	NPC2	P61916	151 aa		13.25	□□□□□ -0.29
PABPC4-225	ENST00000531243	LINC00167	Q96N53	147 aa		13.25	□□□□□ -0.29
PABPC4-225	ENST00000531243	HSPG2	P98160	4391 aa		13.24	□□□□□ -0.29
PABPC4-225	ENST00000531243		M0R378	163 aa		13.24	□□□□□ -0.29
PABPC4-225	ENST00000531243	NDUFC2	O95298	119 aa		13.24	□□□□□ -0.29
PABPC4-225	ENST00000531243	IFITM1	P13164	125 aa		13.24	□□□□□ -0.29
PABPC4-225	ENST00000531243	S100A12	P80511	92 aa		13.24	□□□□□ -0.29
PABPC4-225	ENST00000531243	LINC00308	Q8TCZ7	52 aa		13.24	□□□□□ -0.29
PABPC4-225	ENST00000531243	DLEU1	O43261	78 aa		13.23	□□□□□ -0.29
PABPC4-225	ENST00000531243	PRR3	P79522	188 aa	Known RBP	13.23	□□□□□ -0.29
PABPC4-225	ENST00000531243	GAGE10	A6NGK3	116 aa		13.22	□□□□□ -0.29
PABPC4-225	ENST00000531243	PSORS1C2	Q9UIG4	136 aa		13.22	□□□□□ -0.29
PABPC4-225	ENST00000531243	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
PABPC4-225	ENST00000531243	C1orf137	Q5JT78	98 aa		13.21	□□□□□ -0.29
PABPC4-225	ENST00000531243	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.21	□□□□□ -0.29
PABPC4-225	ENST00000531243	TRBV10-2	A0A0K0K1G8	114 aa		13.2	□□□□□ -0.3
PABPC4-225	ENST00000531243	SLC25A34	Q6PIV7	304 aa		13.2	□□□□□ -0.3
PABPC4-225	ENST00000531243	C14orf144	Q96I85	54 aa		13.2	□□□□□ -0.3
PABPC4-225	ENST00000531243	PPDPF	Q9H3Y8	114 aa		13.2	□□□□□ -0.3
PABPC4-225	ENST00000531243	RPL37AP8	A6NKH3	93 aa		13.19	□□□□□ -0.3
PABPC4-225	ENST00000531243	NCR3	O14931	201 aa		13.19	□□□□□ -0.3
PABPC4-225	ENST00000531243	SOSTDC1	Q6X4U4	206 aa		13.19	□□□□□ -0.3
PABPC4-225	ENST00000531243	KRTAP17-1	Q9BYP8	105 aa		13.19	□□□□□ -0.3
PABPC4-225	ENST00000531243		Q8NDZ9	215 aa		13.18	□□□□□ -0.3
PABPC4-225	ENST00000531243	IGLV1-50	A0A075B6I6	118 aa		13.17	□□□□□ -0.3
PABPC4-225	ENST00000531243	IGKV2-28	A0A075B6P5	120 aa		13.17	□□□□□ -0.3
PABPC4-225	ENST00000531243	IGKV2D-28	P01615	120 aa		13.17	□□□□□ -0.3
PABPC4-225	ENST00000531243	KRTAP10-4	P60372	401 aa	Predicted RBP	13.16	□□□□□ -0.3
PABPC4-225	ENST00000531243	S100A7L2	Q5SY68	101 aa		13.16	□□□□□ -0.3
PABPC4-225	ENST00000531243	LINC00518	Q8N0U6	118 aa		13.16	□□□□□ -0.3
PABPC4-225	ENST00000531243	INAFM2	P0DMQ5	153 aa		13.15	□□□□□ -0.3
PABPC4-225	ENST00000531243	CBY1	Q9Y3M2	126 aa		13.15	□□□□□ -0.3
PABPC4-225	ENST00000531243	KRTAP11-1	Q8IUC1	163 aa		13.14	□□□□□ -0.31
PABPC4-225	ENST00000531243	MUSTN1	Q8IVN3	82 aa		13.14	□□□□□ -0.31
PABPC4-225	ENST00000531243	HERC2	O95714	4834 aa		13.13	□□□□□ -0.31
PABPC4-225	ENST00000531243	KRTAP4-5	Q9BYR2	181 aa		13.13	□□□□□ -0.31
PABPC4-225	ENST00000531243	HIGD1B	Q9P298	99 aa		13.13	□□□□□ -0.31
PABPC4-225	ENST00000531243		J3QL48	77 aa		13.12	□□□□□ -0.31
PABPC4-225	ENST00000531243	EIF4EBP3	O60516	100 aa	Predicted RBP	13.12	□□□□□ -0.31
PABPC4-225	ENST00000531243	IGLV7-43	P04211	117 aa		13.12	□□□□□ -0.31
PABPC4-225	ENST00000531243	DDT	P30046	118 aa		13.12	□□□□□ -0.31
PABPC4-225	ENST00000531243	REG3G	Q6UW15	175 aa		13.12	□□□□□ -0.31
PABPC4-225	ENST00000531243	HIST1H4G	Q99525	98 aa		13.12	□□□□□ -0.31
PABPC4-225	ENST00000531243	PRY	O14603	147 aa		13.11	□□□□□ -0.31
PABPC4-225	ENST00000531243	SMIM6	P0DI80	62 aa		13.11	□□□□□ -0.31
PABPC4-225	ENST00000531243	TRBV10-3	A0A0K0K1G6	114 aa		13.1	□□□□□ -0.31
PABPC4-225	ENST00000531243	BCE1	O60756	84 aa		13.1	□□□□□ -0.31
PABPC4-225	ENST00000531243	SPINK6	Q6UWN8	80 aa		13.1	□□□□□ -0.31
PABPC4-225	ENST00000531243	OR13C6P	Q8NH95	151 aa		13.09	□□□□□ -0.31
PABPC4-225	ENST00000531243	TMEM126A	Q9H061	195 aa		13.09	□□□□□ -0.31
PABPC4-225	ENST00000531243	KCNQ1DN	Q9H478	68 aa		13.08	□□□□□ -0.32
PABPC4-225	ENST00000531243	RPL28	P46779	137 aa	Known RBP	13.07	□□□□□ -0.32
PABPC4-225	ENST00000531243	LOC105371267	A0A1B0GV96	52 aa		13.06	□□□□□ -0.32
PABPC4-225	ENST00000531243	IGLV6-57	P01721	117 aa		13.06	□□□□□ -0.32
PABPC4-225	ENST00000531243	UBE2A	P49459	152 aa		13.06	□□□□□ -0.32
PABPC4-225	ENST00000531243	UQCR10	Q9UDW1	63 aa		13.06	□□□□□ -0.32
PABPC4-225	ENST00000531243	FAT1	Q14517	4588 aa		13.06	□□□□□ -0.32
PABPC4-225	ENST00000531243	ZNF861P	O60384	105 aa		13.05	□□□□□ -0.32
PABPC4-225	ENST00000531243	SMCP	P49901	116 aa	Predicted RBP	13.05	□□□□□ -0.32
PABPC4-225	ENST00000531243	TAL2	Q16559	108 aa		13.05	□□□□□ -0.32
PABPC4-225	ENST00000531243	FAM19A1	Q7Z5A9	133 aa		13.05	□□□□□ -0.32
PABPC4-225	ENST00000531243	DIRC1	Q969H9	104 aa		13.04	□□□□□ -0.32
PABPC4-225	ENST00000531243	VPS13B	Q7Z7G8	4022 aa		13.04	□□□□□ -0.32
PABPC4-225	ENST00000531243	TRAV23DV6	A0A075B6W5	121 aa		13.03	□□□□□ -0.32
PABPC4-225	ENST00000531243	TRAV13-2	A0A0B4J235	113 aa		13.03	□□□□□ -0.32
PABPC4-225	ENST00000531243	ETDC	A0A1B0GVM5	59 aa		13.02	□□□□□ -0.33

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