RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CHTF8P0CG12 524 aa5.58□□□□□ -1.52
CTNND1-220ENST00000529526 C7orf65Q6ZTY9 151 aa5.56□□□□□ -1.52
CTNND1-220ENST00000529526 IGLV5-45A0A087WSX0 123 aa5.56□□□□□ -1.52
CTNND1-220ENST00000529526 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
CTNND1-220ENST00000529526 hDV103S1A0JD37 113 aa5.56□□□□□ -1.52
CTNND1-220ENST00000529526 ELOF1P60002 83 aaKnown RBP5.56□□□□□ -1.52
CTNND1-220ENST00000529526 KRTAP24-1Q3LI83 254 aa5.56□□□□□ -1.52
CTNND1-220ENST00000529526 WDR87Q6ZQQ6 2873 aa5.55□□□□□ -1.52
CTNND1-220ENST00000529526 ST20-AS1Q8NBB2 130 aa5.55□□□□□ -1.52
CTNND1-220ENST00000529526 RTL8CO15255 209 aa5.53□□□□□ -1.52
CTNND1-220ENST00000529526 RPL37AP61513 92 aaKnown RBP5.53□□□□□ -1.52
CTNND1-220ENST00000529526 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
CTNND1-220ENST00000529526 Q6ZQT0 140 aa5.53□□□□□ -1.52
CTNND1-220ENST00000529526 PRO0461Q9UI25 63 aa5.53□□□□□ -1.52
CTNND1-220ENST00000529526 LINC00588Q9Y4M8 146 aa5.53□□□□□ -1.52
CTNND1-220ENST00000529526 Q8NAQ8 132 aa5.53□□□□□ -1.52
CTNND1-220ENST00000529526 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
CTNND1-220ENST00000529526 EPM2AB3EWF7 344 aa5.52□□□□□ -1.53
CTNND1-220ENST00000529526 C4orf26Q17RF5 130 aa5.52□□□□□ -1.53
CTNND1-220ENST00000529526 Q6ZRX8 168 aa5.52□□□□□ -1.53
CTNND1-220ENST00000529526 PIEZO1Q92508 2521 aa5.51□□□□□ -1.53
CTNND1-220ENST00000529526 FAM168BA1KXE4 195 aa5.51□□□□□ -1.53
CTNND1-220ENST00000529526 H3BNG1 76 aa5.51□□□□□ -1.53
CTNND1-220ENST00000529526 PCSK5Q92824 1860 aa5.5□□□□□ -1.53
CTNND1-220ENST00000529526 NBDYA0A0U1RRE5 68 aa5.5□□□□□ -1.53
CTNND1-220ENST00000529526 Q6ZRP5 223 aa5.5□□□□□ -1.53
CTNND1-220ENST00000529526 C16orf90A8MZG2 172 aa5.49□□□□□ -1.53
CTNND1-220ENST00000529526 A0A1B0GU69 56 aa5.49□□□□□ -1.53
CTNND1-220ENST00000529526 MYO18BQ8IUG5 2567 aa5.48□□□□□ -1.53
CTNND1-220ENST00000529526 LOC110117498A0A087WWA1 95 aa5.48□□□□□ -1.53
CTNND1-220ENST00000529526 LITAFQ99732 161 aa5.48□□□□□ -1.53
CTNND1-220ENST00000529526 CENPFP49454 3210 aa5.48□□□□□ -1.53
CTNND1-220ENST00000529526 Q8NBF4 154 aa5.48□□□□□ -1.53
CTNND1-220ENST00000529526 TM2D3Q9BRN9 247 aa5.48□□□□□ -1.53
CTNND1-220ENST00000529526 TP53AIP1Q9HCN2 124 aa5.48□□□□□ -1.53
CTNND1-220ENST00000529526 UTRNP46939 3433 aa5.47□□□□□ -1.53
CTNND1-220ENST00000529526 GVQW2A0A096LPI5 108 aaPredicted RBP5.47□□□□□ -1.53
CTNND1-220ENST00000529526 LINC00313P59037 77 aa5.47□□□□□ -1.53
CTNND1-220ENST00000529526 ACYP2P14621 99 aa5.47□□□□□ -1.53
CTNND1-220ENST00000529526 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
CTNND1-220ENST00000529526 TLN1Q9Y490 2541 aaKnown RBP5.46□□□□□ -1.54
CTNND1-220ENST00000529526 IGLV8-61A0A075B6I0 122 aa5.45□□□□□ -1.54
CTNND1-220ENST00000529526 C8orf87E5RJ46 101 aa5.45□□□□□ -1.54
CTNND1-220ENST00000529526 BCE1O60756 84 aa5.45□□□□□ -1.54
CTNND1-220ENST00000529526 Q96NJ1 140 aa5.44□□□□□ -1.54
CTNND1-220ENST00000529526 IGLV6-57P01721 117 aa5.44□□□□□ -1.54
CTNND1-220ENST00000529526 KRTAP10-11P60412 298 aa5.44□□□□□ -1.54
CTNND1-220ENST00000529526 FAM229AH3BQW9 127 aa5.43□□□□□ -1.54
CTNND1-220ENST00000529526 CSNK1G2-AS1Q8NCQ2 148 aa5.43□□□□□ -1.54
CTNND1-220ENST00000529526 MYO9AB2RTY4 2548 aa5.43□□□□□ -1.54
CTNND1-220ENST00000529526 TRAV22A0A0B4J277 110 aa5.43□□□□□ -1.54
CTNND1-220ENST00000529526 DNAH10OSP0CZ25 163 aa5.43□□□□□ -1.54
CTNND1-220ENST00000529526 SSBP3-AS1Q7Z2R9 100 aa5.43□□□□□ -1.54
CTNND1-220ENST00000529526 K7EQZ3 153 aa5.42□□□□□ -1.54
CTNND1-220ENST00000529526 KLK9Q2XQG4 91 aa5.42□□□□□ -1.54
CTNND1-220ENST00000529526 LRRK2Q5S007 2527 aa5.42□□□□□ -1.54
CTNND1-220ENST00000529526 EIF4EBP3O60516 100 aaPredicted RBP5.42□□□□□ -1.54
CTNND1-220ENST00000529526 A0A1B0GW54 56 aa5.42□□□□□ -1.54
CTNND1-220ENST00000529526 TRBV7-4A0A0J9YYF1 115 aa5.41□□□□□ -1.54
CTNND1-220ENST00000529526 JMJD1CQ15652 2540 aa5.41□□□□□ -1.54
CTNND1-220ENST00000529526 IGLV1-50A0A075B6I6 118 aa5.41□□□□□ -1.54
CTNND1-220ENST00000529526 ABCA12Q86UK0 2595 aa5.41□□□□□ -1.54
CTNND1-220ENST00000529526 MUC4Q99102 2169 aa5.41□□□□□ -1.54
CTNND1-220ENST00000529526 KRTAP10-3P60369 221 aa5.4□□□□□ -1.54
CTNND1-220ENST00000529526 A0A0G2JQZ4 141 aa5.39□□□□□ -1.55
CTNND1-220ENST00000529526 A0A1W2PNN7 141 aa5.39□□□□□ -1.55
CTNND1-220ENST00000529526 A8MWP4 228 aa5.39□□□□□ -1.55
CTNND1-220ENST00000529526 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
CTNND1-220ENST00000529526 FN1P02751 2386 aaKnown RBP5.39□□□□□ -1.55
CTNND1-220ENST00000529526 H3BPC8 53 aa5.39□□□□□ -1.55
CTNND1-220ENST00000529526 C15orf56Q8N910 161 aa5.38□□□□□ -1.55
CTNND1-220ENST00000529526 K7EIL1 84 aa5.38□□□□□ -1.55
CTNND1-220ENST00000529526 DOPEY1Q5JWR5 2465 aa5.38□□□□□ -1.55
CTNND1-220ENST00000529526 WWC2-AS2Q96NR7 200 aa5.37□□□□□ -1.55
CTNND1-220ENST00000529526 DSCR10P59022 87 aa5.37□□□□□ -1.55
CTNND1-220ENST00000529526 IGFL1Q6UW32 110 aa5.37□□□□□ -1.55
CTNND1-220ENST00000529526 KCNQ1DNQ9H478 68 aa5.37□□□□□ -1.55
CTNND1-220ENST00000529526 C9orf129Q5T035 196 aaKnown RBP5.37□□□□□ -1.55
CTNND1-220ENST00000529526 GIG44P09565 113 aaPredicted RBP5.36□□□□□ -1.55
CTNND1-220ENST00000529526 MRPL34Q9BQ48 92 aaKnown RBP5.36□□□□□ -1.55
CTNND1-220ENST00000529526 TLN2Q9Y4G6 2542 aa5.36□□□□□ -1.55
CTNND1-220ENST00000529526 LINC00528Q8N1L1 170 aa5.36□□□□□ -1.55
CTNND1-220ENST00000529526 RPS28P62857 69 aaKnown RBP5.35□□□□□ -1.55
CTNND1-220ENST00000529526 A0A096LNT2 108 aa5.35□□□□□ -1.55
CTNND1-220ENST00000529526 USP9XQ93008 2570 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-220ENST00000529526 COA5Q86WW8 74 aa5.34□□□□□ -1.55
CTNND1-220ENST00000529526 ANAPC11Q9NYG5 84 aa5.34□□□□□ -1.55
CTNND1-220ENST00000529526 ANKRD11Q6UB99 2663 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-220ENST00000529526 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
CTNND1-220ENST00000529526 C9orf92A6NGG3 77 aa5.34□□□□□ -1.55
CTNND1-220ENST00000529526 C19orf73Q9NVV2 129 aa5.34□□□□□ -1.55
CTNND1-220ENST00000529526 PCNTO95613 3336 aa5.33□□□□□ -1.56
CTNND1-220ENST00000529526 PRR34Q9NV39 138 aa5.33□□□□□ -1.56
CTNND1-220ENST00000529526 ZFYVE26Q68DK2 2539 aa5.33□□□□□ -1.56
CTNND1-220ENST00000529526 Q8N377 158 aa5.33□□□□□ -1.56
CTNND1-220ENST00000529526 OBSCN-AS1Q96MR7 158 aa5.32□□□□□ -1.56
CTNND1-220ENST00000529526 A8MUN3 132 aa5.32□□□□□ -1.56
CTNND1-220ENST00000529526 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
CTNND1-220ENST00000529526 ZNF462Q96JM2 2506 aa5.31□□□□□ -1.56
CTNND1-220ENST00000529526 J3QL48 77 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms