RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 URB1-AS1Q96HZ7 61 aa4.27□□□□□ -1.73
ITGB1-218ENST00000528877 YPEL4Q96NS1 127 aa4.27□□□□□ -1.73
ITGB1-218ENST00000528877 IGLV5-37A0A075B6J1 123 aa4.26□□□□□ -1.73
ITGB1-218ENST00000528877 H3BRM9 83 aa4.26□□□□□ -1.73
ITGB1-218ENST00000528877 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
ITGB1-218ENST00000528877 LINC00614P0C842 121 aa4.26□□□□□ -1.73
ITGB1-218ENST00000528877 UBE2BP63146 152 aa4.26□□□□□ -1.73
ITGB1-218ENST00000528877 NDUFA5Q16718 116 aa4.26□□□□□ -1.73
ITGB1-218ENST00000528877 IGLV1-50A0A075B6I6 118 aa4.25□□□□□ -1.73
ITGB1-218ENST00000528877 APOC3P02656 99 aa4.25□□□□□ -1.73
ITGB1-218ENST00000528877 ZNF22P17026 224 aaPredicted RBP4.25□□□□□ -1.73
ITGB1-218ENST00000528877 LBHQ53QV2 105 aaPredicted RBP4.25□□□□□ -1.73
ITGB1-218ENST00000528877 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
ITGB1-218ENST00000528877 MRPL55Q7Z7F7 128 aaKnown RBP4.25□□□□□ -1.73
ITGB1-218ENST00000528877 XAGE1AQ9HD64 81 aa4.25□□□□□ -1.73
ITGB1-218ENST00000528877 C22orf24Q9Y442 160 aa4.25□□□□□ -1.73
ITGB1-218ENST00000528877 TRAPPC1Q9Y5R8 145 aa4.25□□□□□ -1.73
ITGB1-218ENST00000528877 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
ITGB1-218ENST00000528877 ATP5LO75964 103 aa4.24□□□□□ -1.73
ITGB1-218ENST00000528877 SPINK8P0C7L1 97 aa4.24□□□□□ -1.73
ITGB1-218ENST00000528877 RAB5BP61020 215 aa4.24□□□□□ -1.73
ITGB1-218ENST00000528877 ZNF861PO60384 105 aa4.23□□□□□ -1.73
ITGB1-218ENST00000528877 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
ITGB1-218ENST00000528877 COX17Q14061 63 aa4.23□□□□□ -1.73
ITGB1-218ENST00000528877 CHCHD1Q96BP2 118 aaKnown RBP4.23□□□□□ -1.73
ITGB1-218ENST00000528877 ZNF625Q96I27 306 aaPredicted RBP4.23□□□□□ -1.73
ITGB1-218ENST00000528877 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
ITGB1-218ENST00000528877 C11orf86A6NJI1 115 aa4.22□□□□□ -1.73
ITGB1-218ENST00000528877 BCE1O60756 84 aa4.22□□□□□ -1.73
ITGB1-218ENST00000528877 PCP4P48539 62 aa4.22□□□□□ -1.73
ITGB1-218ENST00000528877 PMCHL1Q16048 86 aa4.22□□□□□ -1.73
ITGB1-218ENST00000528877 KRTAP13-1Q8IUC0 172 aa4.22□□□□□ -1.73
ITGB1-218ENST00000528877 PRR26Q8N8Z3 221 aa4.22□□□□□ -1.73
ITGB1-218ENST00000528877 RPL28P46779 137 aaKnown RBP4.21□□□□□ -1.74
ITGB1-218ENST00000528877 LINC00167Q96N53 147 aa4.21□□□□□ -1.74
ITGB1-218ENST00000528877 ERG28Q9UKR5 140 aa4.21□□□□□ -1.74
ITGB1-218ENST00000528877 VPREB1P12018 145 aa4.2□□□□□ -1.74
ITGB1-218ENST00000528877 NDUFA6P56556 154 aa4.2□□□□□ -1.74
ITGB1-218ENST00000528877 BAGE3Q86Y29 109 aa4.2□□□□□ -1.74
ITGB1-218ENST00000528877 CBLN2Q8IUK8 224 aa4.2□□□□□ -1.74
ITGB1-218ENST00000528877 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
ITGB1-218ENST00000528877 SND1-IT1Q9HBX3 110 aa4.2□□□□□ -1.74
ITGB1-218ENST00000528877 TMEM223A0PJW6 202 aa4.19□□□□□ -1.74
ITGB1-218ENST00000528877 KRTAP10-6P60371 365 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-218ENST00000528877 TMEM170BQ5T4T1 132 aa4.19□□□□□ -1.74
ITGB1-218ENST00000528877 IFI27L1Q96BM0 104 aa4.19□□□□□ -1.74
ITGB1-218ENST00000528877 CHTOPQ9Y3Y2 248 aaKnown RBP4.19□□□□□ -1.74
ITGB1-218ENST00000528877 LPAP08519 4548 aa4.18□□□□□ -1.74
ITGB1-218ENST00000528877 RPL37AP8A6NKH3 93 aa4.18□□□□□ -1.74
ITGB1-218ENST00000528877 PFN2P35080 140 aa4.18□□□□□ -1.74
ITGB1-218ENST00000528877 Q8NDZ9 215 aa4.18□□□□□ -1.74
ITGB1-218ENST00000528877 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
ITGB1-218ENST00000528877 A0A087X002 238 aa4.17□□□□□ -1.74
ITGB1-218ENST00000528877 GAGE10A6NGK3 116 aa4.17□□□□□ -1.74
ITGB1-218ENST00000528877 HSBP1O75506 76 aa4.17□□□□□ -1.74
ITGB1-218ENST00000528877 RPL24P83731 157 aaKnown RBP4.17□□□□□ -1.74
ITGB1-218ENST00000528877 FAM229BQ4G0N7 80 aa4.17□□□□□ -1.74
ITGB1-218ENST00000528877 TMEM126AQ9H061 195 aa4.17□□□□□ -1.74
ITGB1-218ENST00000528877 IGKV2-28A0A075B6P5 120 aa4.16□□□□□ -1.74
ITGB1-218ENST00000528877 IGKV2D-28P01615 120 aa4.16□□□□□ -1.74
ITGB1-218ENST00000528877 TRGC2P03986 189 aa4.16□□□□□ -1.74
ITGB1-218ENST00000528877 CRYGAP11844 174 aa4.16□□□□□ -1.74
ITGB1-218ENST00000528877 PLNP26678 52 aa4.16□□□□□ -1.74
ITGB1-218ENST00000528877 HERV-K104P63124 156 aa4.16□□□□□ -1.74
ITGB1-218ENST00000528877 M0R378 163 aa4.15□□□□□ -1.75
ITGB1-218ENST00000528877 SCO1O75880 301 aa4.15□□□□□ -1.75
ITGB1-218ENST00000528877 SERF1AO75920 110 aa4.15□□□□□ -1.75
ITGB1-218ENST00000528877 UBE2AP49459 152 aa4.15□□□□□ -1.75
ITGB1-218ENST00000528877 CTAG1AP78358 180 aa4.15□□□□□ -1.75
ITGB1-218ENST00000528877 IGKV2D-26A0A0A0MRZ7 120 aa4.14□□□□□ -1.75
ITGB1-218ENST00000528877 LINC00587B1AMM8 73 aa4.14□□□□□ -1.75
ITGB1-218ENST00000528877 TMEM238C9JI98 176 aa4.14□□□□□ -1.75
ITGB1-218ENST00000528877 LEPROTL1O95214 131 aa4.14□□□□□ -1.75
ITGB1-218ENST00000528877 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
ITGB1-218ENST00000528877 FAM19A2Q8N3H0 131 aa4.14□□□□□ -1.75
ITGB1-218ENST00000528877 LOC107984156A0A0G2JMH3 177 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 COLCA2A8K830 154 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 MT3P25713 68 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 SPRR1AP35321 89 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 NMUP48645 174 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 LINC00158P58513 81 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 TSPEAR-AS2P59090 65 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 PRLHP81277 87 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 ARL17AQ8IVW1 177 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 NDUFA12Q9UI09 145 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 HSPB8Q9UJY1 196 aa4.13□□□□□ -1.75
ITGB1-218ENST00000528877 MYMXA0A1B0GTQ4 84 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 KRTAP4-16G5E9R7 235 aaPredicted RBP4.12□□□□□ -1.75
ITGB1-218ENST00000528877 LEPROTO15243 131 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 DPM2O94777 84 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 SMIM13P0DJ93 91 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 FAM19A1Q7Z5A9 133 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 MIR7-3HGQ8N6C7 128 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 LINC00337Q8N6G1 96 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 PLEKHB2Q96CS7 222 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 MAP1LC3CQ9BXW4 147 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
ITGB1-218ENST00000528877 KCNQ1DNQ9H478 68 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms