RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	IGKV2-28	A0A075B6P5	120 aa		7.03	□□□□□ -1.28
PSMC3-205	ENST00000528362	IGKV2D-28	P01615	120 aa		7.03	□□□□□ -1.28
PSMC3-205	ENST00000528362	RPL28	P46779	137 aa	Known RBP	7.03	□□□□□ -1.28
PSMC3-205	ENST00000528362	LINC00158	P58513	81 aa		7.03	□□□□□ -1.28
PSMC3-205	ENST00000528362	KRTAP13-1	Q8IUC0	172 aa		7.03	□□□□□ -1.28
PSMC3-205	ENST00000528362	FABP4	P15090	132 aa		7.02	□□□□□ -1.29
PSMC3-205	ENST00000528362	HSPB8	Q9UJY1	196 aa		7.02	□□□□□ -1.29
PSMC3-205	ENST00000528362		A0A0U1RRA0	63 aa		7.01	□□□□□ -1.29
PSMC3-205	ENST00000528362	TSPEAR-AS2	P59090	65 aa		7.01	□□□□□ -1.29
PSMC3-205	ENST00000528362	RPL24	P83731	157 aa	Known RBP	7.01	□□□□□ -1.29
PSMC3-205	ENST00000528362	NDUFA12	Q9UI09	145 aa		7.01	□□□□□ -1.29
PSMC3-205	ENST00000528362	TMEM238	C9JI98	176 aa		7	□□□□□ -1.29
PSMC3-205	ENST00000528362	SMIM13	P0DJ93	91 aa		7	□□□□□ -1.29
PSMC3-205	ENST00000528362	PLN	P26678	52 aa		7	□□□□□ -1.29
PSMC3-205	ENST00000528362	HERV-K104	P63124	156 aa		7	□□□□□ -1.29
PSMC3-205	ENST00000528362	PMCHL2	Q9BQD1	86 aa		7	□□□□□ -1.29
PSMC3-205	ENST00000528362		M0R378	163 aa		6.99	□□□□□ -1.29
PSMC3-205	ENST00000528362	DPM2	O94777	84 aa		6.99	□□□□□ -1.29
PSMC3-205	ENST00000528362	RPL13A	P40429	203 aa	Known RBP	6.99	□□□□□ -1.29
PSMC3-205	ENST00000528362	UBE2A	P49459	152 aa		6.99	□□□□□ -1.29
PSMC3-205	ENST00000528362	TMEM126A	Q9H061	195 aa		6.99	□□□□□ -1.29
PSMC3-205	ENST00000528362	LEPROT	O15243	131 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BK	O60814	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BJ	P06899	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BO	P23527	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BB	P33778	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BD	P58876	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BC	P62807	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST2H2BE	Q16778	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	MEIG1	Q5JSS6	88 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	MIR7-3HG	Q8N6C7	128 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BH	Q93079	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BN	Q99877	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362	HIST1H2BM	Q99879	126 aa		6.98	□□□□□ -1.29
PSMC3-205	ENST00000528362		A0A087X002	238 aa		6.97	□□□□□ -1.29
PSMC3-205	ENST00000528362	MYMX	A0A1B0GTQ4	84 aa		6.97	□□□□□ -1.29
PSMC3-205	ENST00000528362	PRLH	P81277	87 aa		6.97	□□□□□ -1.29
PSMC3-205	ENST00000528362	PLEKHB2	Q96CS7	222 aa		6.97	□□□□□ -1.29
PSMC3-205	ENST00000528362		J3QQQ9	107 aa		6.96	□□□□□ -1.3
PSMC3-205	ENST00000528362	IGKC	P01834	107 aa		6.96	□□□□□ -1.3
PSMC3-205	ENST00000528362	FAM19A1	Q7Z5A9	133 aa		6.96	□□□□□ -1.3
PSMC3-205	ENST00000528362	BOD1L2	Q8IYS8	172 aa		6.96	□□□□□ -1.3
PSMC3-205	ENST00000528362	MAP1LC3C	Q9BXW4	147 aa		6.96	□□□□□ -1.3
PSMC3-205	ENST00000528362	ANAPC11	Q9NYG5	84 aa		6.96	□□□□□ -1.3
PSMC3-205	ENST00000528362	LINC00587	B1AMM8	73 aa		6.95	□□□□□ -1.3
PSMC3-205	ENST00000528362	HERVK_113	P61574	105 aa		6.95	□□□□□ -1.3
PSMC3-205	ENST00000528362	NCR3	O14931	201 aa		6.94	□□□□□ -1.3
PSMC3-205	ENST00000528362	CRYGA	P11844	174 aa		6.94	□□□□□ -1.3
PSMC3-205	ENST00000528362	DAND5	Q8N907	189 aa		6.94	□□□□□ -1.3
PSMC3-205	ENST00000528362	SYS1-DBNDD2	H3BUS1	97 aa		6.93	□□□□□ -1.3
PSMC3-205	ENST00000528362	LGALS3	P17931	250 aa	Known RBP	6.93	□□□□□ -1.3
PSMC3-205	ENST00000528362	NMU	P48645	174 aa		6.93	□□□□□ -1.3
PSMC3-205	ENST00000528362	IGKV2D-26	A0A0A0MRZ7	120 aa		6.92	□□□□□ -1.3
PSMC3-205	ENST00000528362	KRTAP13-2	Q52LG2	175 aa		6.92	□□□□□ -1.3
PSMC3-205	ENST00000528362	LPA	P08519	4548 aa		6.91	□□□□□ -1.3
PSMC3-205	ENST00000528362	LOC107984156	A0A0G2JMH3	177 aa		6.91	□□□□□ -1.3
PSMC3-205	ENST00000528362		E9PLD3	99 aa		6.91	□□□□□ -1.3
PSMC3-205	ENST00000528362	ARL17A	Q8IVW1	177 aa		6.91	□□□□□ -1.3
PSMC3-205	ENST00000528362	TYMSOS	Q8TAI1	123 aa		6.91	□□□□□ -1.3
PSMC3-205	ENST00000528362	KCNQ1DN	Q9H478	68 aa		6.91	□□□□□ -1.3
PSMC3-205	ENST00000528362	TRBV10-3	A0A0K0K1G6	114 aa		6.9	□□□□□ -1.3
PSMC3-205	ENST00000528362	PRY	O14603	147 aa		6.9	□□□□□ -1.3
PSMC3-205	ENST00000528362	SPRR1A	P35321	89 aa		6.9	□□□□□ -1.3
PSMC3-205	ENST00000528362	FAM229B	Q4G0N7	80 aa		6.9	□□□□□ -1.3
PSMC3-205	ENST00000528362	LINC01545	Q5VT33	79 aa		6.9	□□□□□ -1.3
PSMC3-205	ENST00000528362	HIGD2A	Q9BW72	106 aa		6.9	□□□□□ -1.3
PSMC3-205	ENST00000528362		A0A0J9YXY3	114 aa		6.89	□□□□□ -1.31
PSMC3-205	ENST00000528362	COA6	Q5JTJ3	125 aa	Known RBP	6.89	□□□□□ -1.31
PSMC3-205	ENST00000528362	PET117	Q6UWS5	81 aa		6.89	□□□□□ -1.31
PSMC3-205	ENST00000528362	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.88	□□□□□ -1.31
PSMC3-205	ENST00000528362	EIF4EBP3	O60516	100 aa	Predicted RBP	6.88	□□□□□ -1.31
PSMC3-205	ENST00000528362	TSPAN13	O95857	204 aa		6.88	□□□□□ -1.31
PSMC3-205	ENST00000528362	LINC00337	Q8N6G1	96 aa		6.88	□□□□□ -1.31
PSMC3-205	ENST00000528362	TRBV10-2	A0A0K0K1G8	114 aa		6.87	□□□□□ -1.31
PSMC3-205	ENST00000528362	C3orf79	P0CE67	100 aa		6.87	□□□□□ -1.31
PSMC3-205	ENST00000528362	ADAMTSL4-AS1	Q5T5F5	129 aa		6.87	□□□□□ -1.31
PSMC3-205	ENST00000528362	SOSTDC1	Q6X4U4	206 aa		6.87	□□□□□ -1.31
PSMC3-205	ENST00000528362	MIEN1	Q9BRT3	115 aa		6.87	□□□□□ -1.31
PSMC3-205	ENST00000528362	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.87	□□□□□ -1.31
PSMC3-205	ENST00000528362	DDT	P30046	118 aa		6.86	□□□□□ -1.31
PSMC3-205	ENST00000528362	PRR4	Q16378	134 aa		6.86	□□□□□ -1.31
PSMC3-205	ENST00000528362	SPRR4	Q96PI1	79 aa		6.86	□□□□□ -1.31
PSMC3-205	ENST00000528362	ETDC	A0A1B0GVM5	59 aa		6.85	□□□□□ -1.31
PSMC3-205	ENST00000528362	NDUFC2	O95298	119 aa		6.85	□□□□□ -1.31
PSMC3-205	ENST00000528362	NPC2	P61916	151 aa		6.85	□□□□□ -1.31
PSMC3-205	ENST00000528362	LITAF	Q99732	161 aa		6.85	□□□□□ -1.31
PSMC3-205	ENST00000528362	IGLV6-57	P01721	117 aa		6.84	□□□□□ -1.31
PSMC3-205	ENST00000528362	KRTDAP	P60985	99 aa		6.84	□□□□□ -1.31
PSMC3-205	ENST00000528362	C3orf22	Q8N5N4	141 aa		6.84	□□□□□ -1.31
PSMC3-205	ENST00000528362	LINC00304	Q8N9R0	145 aa		6.84	□□□□□ -1.31
PSMC3-205	ENST00000528362	SMCR5	Q8TEV8	140 aa		6.84	□□□□□ -1.31
PSMC3-205	ENST00000528362		B5MCH6	92 aa		6.83	□□□□□ -1.32
PSMC3-205	ENST00000528362	TTTY13	Q9BZ97	58 aa		6.83	□□□□□ -1.32
PSMC3-205	ENST00000528362	ZNF706	Q9Y5V0	76 aa	Predicted RBP	6.83	□□□□□ -1.32
PSMC3-205	ENST00000528362	ZNF815P	A8K554	130 aa		6.82	□□□□□ -1.32
PSMC3-205	ENST00000528362	TIMM17B	O60830	172 aa		6.82	□□□□□ -1.32
PSMC3-205	ENST00000528362	S100A12	P80511	92 aa		6.82	□□□□□ -1.32
PSMC3-205	ENST00000528362	ERC2-IT1	O76042	136 aa		6.81	□□□□□ -1.32
PSMC3-205	ENST00000528362	S100A6	P06703	90 aa		6.81	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms