RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 C4orf48Q5BLP8 95 aa8.94□□□□□ -0.98
CHMP4A-203ENST00000527154 Q8NBF4 154 aa8.94□□□□□ -0.98
CHMP4A-203ENST00000527154 RPS10P5Q9NQ39 176 aa8.94□□□□□ -0.98
CHMP4A-203ENST00000527154 USH2AO75445 5202 aa8.94□□□□□ -0.98
CHMP4A-203ENST00000527154 SMIM1B2RUZ4 78 aa8.93□□□□□ -0.98
CHMP4A-203ENST00000527154 S100A1P23297 94 aa8.93□□□□□ -0.98
CHMP4A-203ENST00000527154 CBLN2Q8IUK8 224 aa8.93□□□□□ -0.98
CHMP4A-203ENST00000527154 COX7B2Q8TF08 81 aa8.93□□□□□ -0.98
CHMP4A-203ENST00000527154 TOMM6Q96B49 74 aa8.93□□□□□ -0.98
CHMP4A-203ENST00000527154 APOC3P02656 99 aa8.92□□□□□ -0.98
CHMP4A-203ENST00000527154 VPREB1P12018 145 aa8.92□□□□□ -0.98
CHMP4A-203ENST00000527154 RAB5BP61020 215 aa8.92□□□□□ -0.98
CHMP4A-203ENST00000527154 PDZD11Q5EBL8 140 aa8.92□□□□□ -0.98
CHMP4A-203ENST00000527154 Q8N377 158 aa8.92□□□□□ -0.98
CHMP4A-203ENST00000527154 ERASQ7Z444 233 aa8.91□□□□□ -0.98
CHMP4A-203ENST00000527154 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
CHMP4A-203ENST00000527154 TINCRA0A1B0GVN0 87 aa8.9□□□□□ -0.98
CHMP4A-203ENST00000527154 FAM19A2Q8N3H0 131 aa8.89□□□□□ -0.99
CHMP4A-203ENST00000527154 NDUFA12Q9UI09 145 aa8.89□□□□□ -0.99
CHMP4A-203ENST00000527154 IGLV5-45A0A087WSX0 123 aa8.88□□□□□ -0.99
CHMP4A-203ENST00000527154 LINC01549A6NIU2 74 aa8.88□□□□□ -0.99
CHMP4A-203ENST00000527154 SPINK8P0C7L1 97 aa8.88□□□□□ -0.99
CHMP4A-203ENST00000527154 KIAA1644Q3SXP7 199 aa8.88□□□□□ -0.99
CHMP4A-203ENST00000527154 HIGD2AQ9BW72 106 aa8.87□□□□□ -0.99
CHMP4A-203ENST00000527154 Q8NDZ9 215 aa8.86□□□□□ -0.99
CHMP4A-203ENST00000527154 MRPL18Q9H0U6 180 aaKnown RBP8.86□□□□□ -0.99
CHMP4A-203ENST00000527154 CST9LQ9H4G1 147 aa8.86□□□□□ -0.99
CHMP4A-203ENST00000527154 ATP5LO75964 103 aa8.85□□□□□ -0.99
CHMP4A-203ENST00000527154 ZNF706Q9Y5V0 76 aaPredicted RBP8.85□□□□□ -0.99
CHMP4A-203ENST00000527154 FABP9Q0Z7S8 132 aa8.84□□□□□ -0.99
CHMP4A-203ENST00000527154 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
CHMP4A-203ENST00000527154 FCGBPQ9Y6R7 5405 aaPredicted RBP8.84□□□□□ -0.99
CHMP4A-203ENST00000527154 LINC01546A6NGU7 62 aa8.83□□□□□ -1
CHMP4A-203ENST00000527154 SLC25A20O43772 301 aa8.83□□□□□ -1
CHMP4A-203ENST00000527154 PFN2P35080 140 aa8.83□□□□□ -1
CHMP4A-203ENST00000527154 IGLV8-61A0A075B6I0 122 aa8.82□□□□□ -1
CHMP4A-203ENST00000527154 H3BRM9 83 aa8.82□□□□□ -1
CHMP4A-203ENST00000527154 PMVKQ15126 192 aa8.82□□□□□ -1
CHMP4A-203ENST00000527154 PCOTHQ58A44 107 aa8.82□□□□□ -1
CHMP4A-203ENST00000527154 TRAPPC1Q9Y5R8 145 aa8.82□□□□□ -1
CHMP4A-203ENST00000527154 FA2HQ7L5A8 372 aa8.81□□□□□ -1
CHMP4A-203ENST00000527154 SND1-IT1Q9HBX3 110 aa8.81□□□□□ -1
CHMP4A-203ENST00000527154 SMCO4Q9NRQ5 59 aa8.81□□□□□ -1
CHMP4A-203ENST00000527154 RPL24P83731 157 aaKnown RBP8.8□□□□□ -1
CHMP4A-203ENST00000527154 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
CHMP4A-203ENST00000527154 YPEL4Q96NS1 127 aa8.79□□□□□ -1
CHMP4A-203ENST00000527154 SPRR1AP35321 89 aa8.78□□□□□ -1
CHMP4A-203ENST00000527154 ERG28Q9UKR5 140 aa8.78□□□□□ -1
CHMP4A-203ENST00000527154 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
CHMP4A-203ENST00000527154 M0R2T5 61 aa8.77□□□□□ -1.01
CHMP4A-203ENST00000527154 KRTAP4-16G5E9R7 235 aaPredicted RBP8.76□□□□□ -1.01
CHMP4A-203ENST00000527154 IGLC3P0DOY3 106 aa8.76□□□□□ -1.01
CHMP4A-203ENST00000527154 NDUFA6P56556 154 aa8.76□□□□□ -1.01
CHMP4A-203ENST00000527154 COX17Q14061 63 aa8.76□□□□□ -1.01
CHMP4A-203ENST00000527154 SLC7A5P1Q8MH63 180 aa8.76□□□□□ -1.01
CHMP4A-203ENST00000527154 ZNF625Q96I27 306 aaPredicted RBP8.76□□□□□ -1.01
CHMP4A-203ENST00000527154 C18orf32Q8TCD1 76 aa8.75□□□□□ -1.01
CHMP4A-203ENST00000527154 LINC00614P0C842 121 aa8.74□□□□□ -1.01
CHMP4A-203ENST00000527154 ZNF22P17026 224 aaPredicted RBP8.74□□□□□ -1.01
CHMP4A-203ENST00000527154 SMCR5Q8TEV8 140 aa8.74□□□□□ -1.01
CHMP4A-203ENST00000527154 MOBPQ13875 183 aa8.73□□□□□ -1.01
CHMP4A-203ENST00000527154 HBDP02042 147 aa8.72□□□□□ -1.01
CHMP4A-203ENST00000527154 PRYO14603 147 aa8.71□□□□□ -1.02
CHMP4A-203ENST00000527154 CHCHD1Q96BP2 118 aaKnown RBP8.71□□□□□ -1.02
CHMP4A-203ENST00000527154 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
CHMP4A-203ENST00000527154 SFTA2Q6UW10 78 aa8.7□□□□□ -1.02
CHMP4A-203ENST00000527154 A0A096LNJ9 63 aa8.69□□□□□ -1.02
CHMP4A-203ENST00000527154 KCNQ1DNQ9H478 68 aa8.69□□□□□ -1.02
CHMP4A-203ENST00000527154 LINC00158P58513 81 aa8.68□□□□□ -1.02
CHMP4A-203ENST00000527154 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
CHMP4A-203ENST00000527154 URB1-AS1Q96HZ7 61 aa8.68□□□□□ -1.02
CHMP4A-203ENST00000527154 IGLV9-49A0A0B4J1Y8 123 aa8.67□□□□□ -1.02
CHMP4A-203ENST00000527154 C11orf86A6NJI1 115 aa8.67□□□□□ -1.02
CHMP4A-203ENST00000527154 GAGE2AQ6NT46 116 aa8.67□□□□□ -1.02
CHMP4A-203ENST00000527154 A0A0U1RRA0 63 aa8.66□□□□□ -1.02
CHMP4A-203ENST00000527154 BAGE3Q86Y29 109 aa8.66□□□□□ -1.02
CHMP4A-203ENST00000527154 MACF1Q9UPN3 7388 aaKnown RBP8.65□□□□□ -1.02
CHMP4A-203ENST00000527154 TRGC2P03986 189 aa8.65□□□□□ -1.02
CHMP4A-203ENST00000527154 PMCHL1Q16048 86 aa8.65□□□□□ -1.02
CHMP4A-203ENST00000527154 COLCA2A8K830 154 aa8.64□□□□□ -1.03
CHMP4A-203ENST00000527154 ERC2-IT1O76042 136 aa8.64□□□□□ -1.03
CHMP4A-203ENST00000527154 HSBP1O75506 76 aa8.63□□□□□ -1.03
CHMP4A-203ENST00000527154 KRTAP9-8Q9BYQ0 159 aa8.62□□□□□ -1.03
CHMP4A-203ENST00000527154 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
CHMP4A-203ENST00000527154 NCR3O14931 201 aa8.61□□□□□ -1.03
CHMP4A-203ENST00000527154 CFC1P0CG37 223 aa8.61□□□□□ -1.03
CHMP4A-203ENST00000527154 COX6B2Q6YFQ2 88 aa8.61□□□□□ -1.03
CHMP4A-203ENST00000527154 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
CHMP4A-203ENST00000527154 ETDCA0A1B0GVM5 59 aa8.6□□□□□ -1.03
CHMP4A-203ENST00000527154 B5MCH6 92 aa8.6□□□□□ -1.03
CHMP4A-203ENST00000527154 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
CHMP4A-203ENST00000527154 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
CHMP4A-203ENST00000527154 CHTOPQ9Y3Y2 248 aaKnown RBP8.6□□□□□ -1.03
CHMP4A-203ENST00000527154 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
CHMP4A-203ENST00000527154 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
CHMP4A-203ENST00000527154 MEIG1Q5JSS6 88 aa8.59□□□□□ -1.03
CHMP4A-203ENST00000527154 Q9BRP9 147 aa8.59□□□□□ -1.03
CHMP4A-203ENST00000527154 MIR7-3HGQ8N6C7 128 aa8.57□□□□□ -1.04
CHMP4A-203ENST00000527154 HSPB8Q9UJY1 196 aa8.57□□□□□ -1.04
CHMP4A-203ENST00000527154 TRBV10-3A0A0K0K1G6 114 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms