RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 Q6ZRP5 223 aa12.89□□□□□ -0.35
PPP1CA-204ENST00000526510 LINC00337Q8N6G1 96 aa12.89□□□□□ -0.35
PPP1CA-204ENST00000526510 XAGE1AQ9HD64 81 aa12.89□□□□□ -0.35
PPP1CA-204ENST00000526510 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
PPP1CA-204ENST00000526510 PRR3P79522 188 aaKnown RBP12.88□□□□□ -0.35
PPP1CA-204ENST00000526510 TLX1NBP0CAT3 122 aa12.87□□□□□ -0.35
PPP1CA-204ENST00000526510 NDUFC2O95298 119 aa12.86□□□□□ -0.35
PPP1CA-204ENST00000526510 CNBPP62633 177 aaKnown RBP12.86□□□□□ -0.35
PPP1CA-204ENST00000526510 C14orf177Q52M58 125 aa12.86□□□□□ -0.35
PPP1CA-204ENST00000526510 GAGE2EQ4V326 116 aa12.86□□□□□ -0.35
PPP1CA-204ENST00000526510 GAGE2DQ9UEU5 116 aa12.86□□□□□ -0.35
PPP1CA-204ENST00000526510 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.85□□□□□ -0.35
PPP1CA-204ENST00000526510 VAMP3Q15836 100 aa12.85□□□□□ -0.35
PPP1CA-204ENST00000526510 Q1RN00 199 aa12.83□□□□□ -0.35
PPP1CA-204ENST00000526510 C9orf129Q5T035 196 aaKnown RBP12.83□□□□□ -0.35
PPP1CA-204ENST00000526510 C1orf134Q5TEV5 83 aa12.83□□□□□ -0.35
PPP1CA-204ENST00000526510 TRAV13-2A0A0B4J235 113 aa12.83□□□□□ -0.36
PPP1CA-204ENST00000526510 FABP2P12104 132 aa12.83□□□□□ -0.36
PPP1CA-204ENST00000526510 RPL18AQ02543 176 aaKnown RBP12.83□□□□□ -0.36
PPP1CA-204ENST00000526510 A0A087WTM6 91 aa12.81□□□□□ -0.36
PPP1CA-204ENST00000526510 NCR3O14931 201 aa12.81□□□□□ -0.36
PPP1CA-204ENST00000526510 TRIAP1O43715 76 aa12.8□□□□□ -0.36
PPP1CA-204ENST00000526510 Q8N814 137 aa12.8□□□□□ -0.36
PPP1CA-204ENST00000526510 HYDINQ4G0P3 5121 aa12.8□□□□□ -0.36
PPP1CA-204ENST00000526510 LOC107984640A0A0U1RRK4 108 aa12.8□□□□□ -0.36
PPP1CA-204ENST00000526510 VPREB1P12018 145 aa12.79□□□□□ -0.36
PPP1CA-204ENST00000526510 PSMB2P49721 201 aa12.79□□□□□ -0.36
PPP1CA-204ENST00000526510 SPCS1Q9Y6A9 102 aa12.79□□□□□ -0.36
PPP1CA-204ENST00000526510 FRAS1Q86XX4 4008 aa12.78□□□□□ -0.36
PPP1CA-204ENST00000526510 K7EP34 96 aa12.78□□□□□ -0.36
PPP1CA-204ENST00000526510 DNAH17Q9UFH2 4485 aa12.78□□□□□ -0.36
PPP1CA-204ENST00000526510 OR13C6PQ8NH95 151 aa12.77□□□□□ -0.36
PPP1CA-204ENST00000526510 GAGE2BQ13066 116 aa12.77□□□□□ -0.37
PPP1CA-204ENST00000526510 HECTD4Q9Y4D8 3996 aa12.76□□□□□ -0.37
PPP1CA-204ENST00000526510 GAGE10A6NGK3 116 aa12.76□□□□□ -0.37
PPP1CA-204ENST00000526510 UBE2V1Q13404 147 aa12.76□□□□□ -0.37
PPP1CA-204ENST00000526510 SMIM11BQ8TCY0 68 aa12.75□□□□□ -0.37
PPP1CA-204ENST00000526510 TRBV10-2A0A0K0K1G8 114 aa12.74□□□□□ -0.37
PPP1CA-204ENST00000526510 SERTAD4-AS1Q5TG53 156 aa12.74□□□□□ -0.37
PPP1CA-204ENST00000526510 C9orf163Q8N9P6 203 aa12.74□□□□□ -0.37
PPP1CA-204ENST00000526510 SCGB1C2P0DMR2 95 aa12.73□□□□□ -0.37
PPP1CA-204ENST00000526510 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
PPP1CA-204ENST00000526510 A0A096LNI7 61 aa12.73□□□□□ -0.37
PPP1CA-204ENST00000526510 FAM168BA1KXE4 195 aa12.73□□□□□ -0.37
PPP1CA-204ENST00000526510 LINC01620Q4KN68 170 aa12.73□□□□□ -0.37
PPP1CA-204ENST00000526510 RTL8CO15255 209 aa12.72□□□□□ -0.37
PPP1CA-204ENST00000526510 TCL1BO95988 128 aa12.72□□□□□ -0.37
PPP1CA-204ENST00000526510 GTF2H5Q6ZYL4 71 aa12.72□□□□□ -0.37
PPP1CA-204ENST00000526510 KRTAP7-1Q8IUC3 87 aa12.72□□□□□ -0.37
PPP1CA-204ENST00000526510 TMEM126AQ9H061 195 aa12.72□□□□□ -0.37
PPP1CA-204ENST00000526510 PLA2G2DQ9UNK4 145 aa12.72□□□□□ -0.37
PPP1CA-204ENST00000526510 IGLV6-57P01721 117 aa12.71□□□□□ -0.37
PPP1CA-204ENST00000526510 LYRM7Q5U5X0 104 aa12.71□□□□□ -0.37
PPP1CA-204ENST00000526510 SACSQ9NZJ4 4579 aa12.71□□□□□ -0.37
PPP1CA-204ENST00000526510 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
PPP1CA-204ENST00000526510 FUSP35637 526 aaKnown RBP eCLIP12.7□□□□□ -0.38
PPP1CA-204ENST00000526510 TNP2Q05952 138 aa12.7□□□□□ -0.38
PPP1CA-204ENST00000526510 S100A7L2Q5SY68 101 aa12.7□□□□□ -0.38
PPP1CA-204ENST00000526510 TRBV10-3A0A0K0K1G6 114 aa12.69□□□□□ -0.38
PPP1CA-204ENST00000526510 H3BMG7 143 aa12.69□□□□□ -0.38
PPP1CA-204ENST00000526510 M0R378 163 aa12.69□□□□□ -0.38
PPP1CA-204ENST00000526510 IGKV2-24A0A0C4DH68 120 aa12.68□□□□□ -0.38
PPP1CA-204ENST00000526510 COX6CP09669 75 aa12.68□□□□□ -0.38
PPP1CA-204ENST00000526510 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
PPP1CA-204ENST00000526510 CLEC2BQ92478 149 aa12.68□□□□□ -0.38
PPP1CA-204ENST00000526510 IGLV5-37A0A075B6J1 123 aa12.67□□□□□ -0.38
PPP1CA-204ENST00000526510 TRBV20-1A0A075B6N2 111 aa12.67□□□□□ -0.38
PPP1CA-204ENST00000526510 LCE6AA0A183 80 aa12.67□□□□□ -0.38
PPP1CA-204ENST00000526510 CHTF8P0CG12 524 aa12.66□□□□□ -0.38
PPP1CA-204ENST00000526510 NKAPP1Q8N9T2 125 aa12.65□□□□□ -0.38
PPP1CA-204ENST00000526510 FAM19A5Q7Z5A7 132 aaPredicted RBP12.64□□□□□ -0.39
PPP1CA-204ENST00000526510 C7orf33Q8WU49 177 aa12.64□□□□□ -0.39
PPP1CA-204ENST00000526510 DNAH11Q96DT5 4516 aa12.63□□□□□ -0.39
PPP1CA-204ENST00000526510 A0A1W2PNN7 141 aa12.63□□□□□ -0.39
PPP1CA-204ENST00000526510 FAM218AQ96MZ4 157 aa12.63□□□□□ -0.39
PPP1CA-204ENST00000526510 PANO1I0J062 215 aa12.62□□□□□ -0.39
PPP1CA-204ENST00000526510 LST1O00453 97 aa12.62□□□□□ -0.39
PPP1CA-204ENST00000526510 C22orf24Q9Y442 160 aa12.62□□□□□ -0.39
PPP1CA-204ENST00000526510 FAT2Q9NYQ8 4349 aa12.62□□□□□ -0.39
PPP1CA-204ENST00000526510 ATXN8Q156A1 80 aa12.61□□□□□ -0.39
PPP1CA-204ENST00000526510 TRAV23DV6A0A075B6W5 121 aa12.61□□□□□ -0.39
PPP1CA-204ENST00000526510 C6orf99Q4VX62 202 aa12.61□□□□□ -0.39
PPP1CA-204ENST00000526510 MTURNQ8N3F0 131 aa12.61□□□□□ -0.39
PPP1CA-204ENST00000526510 PRO0461Q9UI25 63 aa12.61□□□□□ -0.39
PPP1CA-204ENST00000526510 PKIGQ9Y2B9 76 aa12.6□□□□□ -0.39
PPP1CA-204ENST00000526510 PKD1P98161 4303 aa12.6□□□□□ -0.39
PPP1CA-204ENST00000526510 LINC00167Q96N53 147 aa12.59□□□□□ -0.39
PPP1CA-204ENST00000526510 IGLV5-52A0A0A0MRZ9 124 aa12.58□□□□□ -0.4
PPP1CA-204ENST00000526510 H0YGX0 51 aa12.57□□□□□ -0.4
PPP1CA-204ENST00000526510 MRPL55Q7Z7F7 128 aaKnown RBP12.57□□□□□ -0.4
PPP1CA-204ENST00000526510 KRTAP10-2P60368 255 aa12.57□□□□□ -0.4
PPP1CA-204ENST00000526510 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.57□□□□□ -0.4
PPP1CA-204ENST00000526510 IGLV1-50A0A075B6I6 118 aa12.56□□□□□ -0.4
PPP1CA-204ENST00000526510 A0A087WYN8 130 aa12.56□□□□□ -0.4
PPP1CA-204ENST00000526510 RPL37AP8A6NKH3 93 aa12.56□□□□□ -0.4
PPP1CA-204ENST00000526510 ZNF73O43830 326 aaPredicted RBP12.56□□□□□ -0.4
PPP1CA-204ENST00000526510 M0QXV9 152 aa12.55□□□□□ -0.4
PPP1CA-204ENST00000526510 SMCPP49901 116 aaPredicted RBP12.55□□□□□ -0.4
PPP1CA-204ENST00000526510 KCNQ1DNQ9H478 68 aa12.55□□□□□ -0.4
PPP1CA-204ENST00000526510 SPACA4Q8TDM5 124 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 281 ms