RNA–Protein interactions for RNA: ENST00000525902.5

CTNND1-212, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-212ENST00000525902 CACNA1BQ00975 2339 aa4.46□□□□□ -1.7
CTNND1-212ENST00000525902 IGLV8-61A0A075B6I0 122 aa4.46□□□□□ -1.7
CTNND1-212ENST00000525902 GPR179Q6PRD1 2367 aa4.45□□□□□ -1.7
CTNND1-212ENST00000525902 DEFB135Q30KP9 77 aa4.45□□□□□ -1.7
CTNND1-212ENST00000525902 IGLV7-46A0A075B6I9 117 aa4.45□□□□□ -1.7
CTNND1-212ENST00000525902 IGLV9-49A0A0B4J1Y8 123 aa4.45□□□□□ -1.7
CTNND1-212ENST00000525902 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
CTNND1-212ENST00000525902 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
CTNND1-212ENST00000525902 A6NN06 94 aa4.44□□□□□ -1.7
CTNND1-212ENST00000525902 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
CTNND1-212ENST00000525902 DSCAMO60469 2012 aa4.44□□□□□ -1.7
CTNND1-212ENST00000525902 A0A087X002 238 aa4.44□□□□□ -1.7
CTNND1-212ENST00000525902 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
CTNND1-212ENST00000525902 PLA2G1BP04054 148 aaKnown RBP4.44□□□□□ -1.7
CTNND1-212ENST00000525902 FAM229AH3BQW9 127 aa4.43□□□□□ -1.7
CTNND1-212ENST00000525902 DEFB113Q30KQ7 82 aa4.43□□□□□ -1.7
CTNND1-212ENST00000525902 EP400Q96L91 3159 aa4.43□□□□□ -1.7
CTNND1-212ENST00000525902 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
CTNND1-212ENST00000525902 X6R8D5 127 aa4.42□□□□□ -1.7
CTNND1-212ENST00000525902 CNOT1A5YKK6 2376 aaKnown RBP4.42□□□□□ -1.7
CTNND1-212ENST00000525902 ST20-AS1Q8NBB2 130 aa4.42□□□□□ -1.7
CTNND1-212ENST00000525902 CREBBPQ92793 2442 aa4.42□□□□□ -1.7
CTNND1-212ENST00000525902 ABCA4P78363 2273 aa4.42□□□□□ -1.7
CTNND1-212ENST00000525902 EP300Q09472 2414 aaPredicted RBP4.42□□□□□ -1.7
CTNND1-212ENST00000525902 IGKV2D-30A0A075B6S6 120 aa4.41□□□□□ -1.7
CTNND1-212ENST00000525902 IGKV2-30P06310 120 aa4.41□□□□□ -1.7
CTNND1-212ENST00000525902 TECTAO75443 2155 aa4.41□□□□□ -1.7
CTNND1-212ENST00000525902 MAPK1IP1LQ8NDC0 245 aa4.41□□□□□ -1.7
CTNND1-212ENST00000525902 APC2O95996 2303 aa4.41□□□□□ -1.7
CTNND1-212ENST00000525902 Q6ZRX8 168 aa4.41□□□□□ -1.7
CTNND1-212ENST00000525902 CUL9Q8IWT3 2517 aa4.4□□□□□ -1.7
CTNND1-212ENST00000525902 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
CTNND1-212ENST00000525902 MED13LQ71F56 2210 aa4.4□□□□□ -1.71
CTNND1-212ENST00000525902 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.71
CTNND1-212ENST00000525902 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
CTNND1-212ENST00000525902 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
CTNND1-212ENST00000525902 C10orf99Q6UWK7 81 aa4.39□□□□□ -1.71
CTNND1-212ENST00000525902 ACACAQ13085 2346 aa4.39□□□□□ -1.71
CTNND1-212ENST00000525902 DEFB4AO15263 64 aa4.38□□□□□ -1.71
CTNND1-212ENST00000525902 C9orf163Q8N9P6 203 aa4.38□□□□□ -1.71
CTNND1-212ENST00000525902 IGLV1-51P01701 117 aa4.37□□□□□ -1.71
CTNND1-212ENST00000525902 RPL37AP61513 92 aaKnown RBP4.37□□□□□ -1.71
CTNND1-212ENST00000525902 SPTBN2O15020 2390 aa4.37□□□□□ -1.71
CTNND1-212ENST00000525902 Q8NAQ8 132 aa4.37□□□□□ -1.71
CTNND1-212ENST00000525902 LINC00528Q8N1L1 170 aa4.37□□□□□ -1.71
CTNND1-212ENST00000525902 SPINK7P58062 85 aa4.36□□□□□ -1.71
CTNND1-212ENST00000525902 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
CTNND1-212ENST00000525902 GVINP1Q7Z2Y8 2422 aa4.36□□□□□ -1.71
CTNND1-212ENST00000525902 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.36□□□□□ -1.719e-7■■■□□ 18
CTNND1-212ENST00000525902 COL6A6A6NMZ7 2263 aa4.36□□□□□ -1.71
CTNND1-212ENST00000525902 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
CTNND1-212ENST00000525902 NUPR2A6NF83 97 aa4.35□□□□□ -1.71
CTNND1-212ENST00000525902 CACNA1GO43497 2377 aa4.35□□□□□ -1.71
CTNND1-212ENST00000525902 PCNX1Q96RV3 2341 aa4.35□□□□□ -1.71
CTNND1-212ENST00000525902 CACNA1HO95180 2353 aa4.35□□□□□ -1.71
CTNND1-212ENST00000525902 NOTCH3Q9UM47 2321 aa4.35□□□□□ -1.71
CTNND1-212ENST00000525902 IGLV7-43P04211 117 aa4.34□□□□□ -1.71
CTNND1-212ENST00000525902 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
CTNND1-212ENST00000525902 H3BNG1 76 aa4.33□□□□□ -1.72
CTNND1-212ENST00000525902 ZNF575Q86XF7 245 aa4.33□□□□□ -1.72
CTNND1-212ENST00000525902 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
CTNND1-212ENST00000525902 ANKHD1Q8IWZ3 2542 aaKnown RBP4.32□□□□□ -1.72
CTNND1-212ENST00000525902 SPTAN1Q13813 2472 aaKnown RBP4.32□□□□□ -1.72
CTNND1-212ENST00000525902 APLNQ9ULZ1 77 aa4.32□□□□□ -1.72
CTNND1-212ENST00000525902 IGLV5-48A0A075B6I7 105 aa4.31□□□□□ -1.72
CTNND1-212ENST00000525902 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
CTNND1-212ENST00000525902 RIF1Q5UIP0 2472 aaKnown RBP4.3□□□□□ -1.72
CTNND1-212ENST00000525902 M0R2N4 97 aa4.3□□□□□ -1.72
CTNND1-212ENST00000525902 PCSK5Q92824 1860 aa4.3□□□□□ -1.72
CTNND1-212ENST00000525902 IGFL1Q6UW32 110 aa4.3□□□□□ -1.72
CTNND1-212ENST00000525902 Q8N377 158 aa4.3□□□□□ -1.72
CTNND1-212ENST00000525902 INAFM1C9JVW0 142 aa4.3□□□□□ -1.72
CTNND1-212ENST00000525902 PLA2G2DQ9UNK4 145 aa4.3□□□□□ -1.72
CTNND1-212ENST00000525902 LINC01556Q5JQF7 62 aa4.29□□□□□ -1.72
CTNND1-212ENST00000525902 COL27A1Q8IZC6 1860 aaPredicted RBP4.29□□□□□ -1.72
CTNND1-212ENST00000525902 A0A1W2PNM2 257 aa4.29□□□□□ -1.72
CTNND1-212ENST00000525902 ROMO1P60602 79 aa4.28□□□□□ -1.72
CTNND1-212ENST00000525902 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
CTNND1-212ENST00000525902 A0A1B0GU33 70 aa4.28□□□□□ -1.72
CTNND1-212ENST00000525902 CSNK1G2-AS1Q8NCQ2 148 aa4.28□□□□□ -1.72
CTNND1-212ENST00000525902 DSCR10P59022 87 aa4.27□□□□□ -1.73
CTNND1-212ENST00000525902 SPRR4Q96PI1 79 aa4.27□□□□□ -1.73
CTNND1-212ENST00000525902 J3QKU1 62 aa4.27□□□□□ -1.73
CTNND1-212ENST00000525902 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
CTNND1-212ENST00000525902 HRES1P13985 223 aa4.27□□□□□ -1.73
CTNND1-212ENST00000525902 A0A1W2PPR1 153 aa4.26□□□□□ -1.73
CTNND1-212ENST00000525902 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
CTNND1-212ENST00000525902 SRCAPQ6ZRS2 3230 aa4.26□□□□□ -1.73
CTNND1-212ENST00000525902 IGLV1-50A0A075B6I6 118 aa4.26□□□□□ -1.73
CTNND1-212ENST00000525902 BPTFQ12830 3046 aa4.25□□□□□ -1.73
CTNND1-212ENST00000525902 PRR34Q9NV39 138 aa4.24□□□□□ -1.73
CTNND1-212ENST00000525902 ZCCHC13Q8WW36 166 aaKnown RBP4.24□□□□□ -1.73
CTNND1-212ENST00000525902 OTOGLQ3ZCN5 2332 aa4.23□□□□□ -1.73
CTNND1-212ENST00000525902 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
CTNND1-212ENST00000525902 MUC4Q99102 2169 aa4.23□□□□□ -1.73
CTNND1-212ENST00000525902 LINC00612Q8N6U2 182 aa4.23□□□□□ -1.73
CTNND1-212ENST00000525902 PTPRQQ9UMZ3 2332 aa4.23□□□□□ -1.73
CTNND1-212ENST00000525902 LY6G6CO95867 125 aa4.23□□□□□ -1.73
CTNND1-212ENST00000525902 NBASA2RRP1 2371 aa4.22□□□□□ -1.73
CTNND1-212ENST00000525902 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms