RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 A0A087WZ39 114 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 LINC01546A6NGU7 62 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 C11orf86A6NJI1 115 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 K7EMI3 77 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 NUPR1O60356 82 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 INAFM2P0DMQ5 153 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 HNRNPA3P51991 378 aaKnown RBP3.23□□□□□ -1.89
SVIP-202ENST00000525670 RAB5BP61020 215 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 RPL37AP61513 92 aaKnown RBP3.23□□□□□ -1.89
SVIP-202ENST00000525670 HERVK_113P63121 156 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 PDZD11Q5EBL8 140 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 TMEM170BQ5T4T1 132 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 OR10D4PQ8NGN7 298 aa3.23□□□□□ -1.89
SVIP-202ENST00000525670 A0A0U1RRA0 63 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 LOC107984640A0A0U1RRK4 108 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 TINCRA0A1B0GVN0 87 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 ZNF22P17026 224 aaPredicted RBP3.22□□□□□ -1.89
SVIP-202ENST00000525670 CKS1BP61024 79 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 KIAA0087Q14695 138 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 C6orf226Q5I0X4 101 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 Q6ZRP5 223 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 PHF5AQ7RTV0 110 aaKnown RBP3.22□□□□□ -1.89
SVIP-202ENST00000525670 COX7B2Q8TF08 81 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 IFI27L1Q96BM0 104 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 ZNF625Q96I27 306 aaPredicted RBP3.22□□□□□ -1.89
SVIP-202ENST00000525670 XAGE1AQ9HD64 81 aa3.22□□□□□ -1.89
SVIP-202ENST00000525670 CHTOPQ9Y3Y2 248 aaKnown RBP3.22□□□□□ -1.89
SVIP-202ENST00000525670 A0A1W2PNN7 141 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BKO60814 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 ATP5LO75964 103 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BJP06899 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 IGLC3P0DOY3 106 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BOP23527 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 G0S2P27469 103 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BBP33778 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 PFN2P35080 140 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BDP58876 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BCP62807 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST2H2BEQ16778 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BHQ93079 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 CHCHD1Q96BP2 118 aaKnown RBP3.21□□□□□ -1.9
SVIP-202ENST00000525670 C2orf48Q96LS8 159 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BNQ99877 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 HIST1H2BMQ99879 126 aa3.21□□□□□ -1.9
SVIP-202ENST00000525670 MRPL35Q9NZE8 188 aaKnown RBP3.21□□□□□ -1.9
SVIP-202ENST00000525670 DMBT1Q9UGM3 2413 aaPredicted RBP3.21□□□□□ -1.9
SVIP-202ENST00000525670 HERC1Q15751 4861 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 H3BRM9 83 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 M0QXV9 152 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 LEPROTL1O95214 131 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 KRTAP12-2P59991 146 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 C9orf129Q5T035 196 aaKnown RBP3.2□□□□□ -1.9
SVIP-202ENST00000525670 Q8IZM0 81 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 C7orf33Q8WU49 177 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
SVIP-202ENST00000525670 TSPEAR-AS2P59090 65 aa3.19□□□□□ -1.9
SVIP-202ENST00000525670 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
SVIP-202ENST00000525670 UBE2BP63146 152 aa3.19□□□□□ -1.9
SVIP-202ENST00000525670 SEC11AP67812 179 aa3.19□□□□□ -1.9
SVIP-202ENST00000525670 CIRBPQ14011 172 aaKnown RBP3.19□□□□□ -1.9
SVIP-202ENST00000525670 LCE3AQ5TA76 89 aa3.19□□□□□ -1.9
SVIP-202ENST00000525670 FAM19A3Q7Z5A8 133 aa3.19□□□□□ -1.9
SVIP-202ENST00000525670 KRTAP11-1Q8IUC1 163 aa3.19□□□□□ -1.9
SVIP-202ENST00000525670 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
SVIP-202ENST00000525670 TRBV30A0A0K0K1B3 111 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 NDUFC2-KCTD14E9PQ53 114 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 F8VRH5 84 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 KRTDAPP60985 99 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
SVIP-202ENST00000525670 KRTAP13-3Q3SY46 172 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 ATOH7Q8N100 152 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 HSPB8Q9UJY1 196 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 PKIGQ9Y2B9 76 aa3.18□□□□□ -1.9
SVIP-202ENST00000525670 TNXBP22105 4242 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 TMEM223A0PJW6 202 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 LINC01549A6NIU2 74 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 A8MU10 97 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 NPC2P61916 151 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 C1orf137Q5JT78 98 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 LINC01561Q8N1V8 128 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 DAND5Q8N907 189 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 MAP1LC3CQ9BXW4 147 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 LINC00474Q9P2X8 69 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 PSORS1C2Q9UIG4 136 aa3.17□□□□□ -1.9
SVIP-202ENST00000525670 IGKV2-28A0A075B6P5 120 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 RPL37AP8A6NKH3 93 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 NCR3O14931 201 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 DPM2O94777 84 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 IGKV2D-28P01615 120 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 IGKCP01834 107 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 SMIM13P0DJ93 91 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 S100A1P23297 94 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 CXCL5P42830 114 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 LINC00158P58513 81 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 ERG28Q9UKR5 140 aa3.16□□□□□ -1.9
SVIP-202ENST00000525670 SYS1-DBNDD2H3BUS1 97 aa3.15□□□□□ -1.91
SVIP-202ENST00000525670 TLX1NBP0CAT3 122 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms