RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 Q8NDZ9 215 aa11.86□□□□□ -0.51
TM9SF1-204ENST00000525592 RNF213Q63HN8 5207 aa11.86□□□□□ -0.51
TM9SF1-204ENST00000525592 LEPROTL1O95214 131 aa11.85□□□□□ -0.51
TM9SF1-204ENST00000525592 HERV-K104P63124 156 aa11.85□□□□□ -0.51
TM9SF1-204ENST00000525592 SERF1AO75920 110 aa11.84□□□□□ -0.51
TM9SF1-204ENST00000525592 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
TM9SF1-204ENST00000525592 TMEM238C9JI98 176 aa11.83□□□□□ -0.52
TM9SF1-204ENST00000525592 M0R378 163 aa11.83□□□□□ -0.52
TM9SF1-204ENST00000525592 LINC00310P59036 64 aa11.83□□□□□ -0.52
TM9SF1-204ENST00000525592 FAM229BQ4G0N7 80 aa11.83□□□□□ -0.52
TM9SF1-204ENST00000525592 FAM19A1Q7Z5A9 133 aa11.83□□□□□ -0.52
TM9SF1-204ENST00000525592 H0Y8G0 127 aa11.82□□□□□ -0.52
TM9SF1-204ENST00000525592 ATP6V1G1O75348 118 aa11.82□□□□□ -0.52
TM9SF1-204ENST00000525592 PRLHP81277 87 aa11.82□□□□□ -0.52
TM9SF1-204ENST00000525592 MEIG1Q5JSS6 88 aa11.82□□□□□ -0.52
TM9SF1-204ENST00000525592 TYMSOSQ8TAI1 123 aa11.82□□□□□ -0.52
TM9SF1-204ENST00000525592 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
TM9SF1-204ENST00000525592 SMIM13P0DJ93 91 aa11.81□□□□□ -0.52
TM9SF1-204ENST00000525592 PLNP26678 52 aa11.81□□□□□ -0.52
TM9SF1-204ENST00000525592 SLC7A5P1Q8MH63 180 aa11.81□□□□□ -0.52
TM9SF1-204ENST00000525592 NDUFA12Q9UI09 145 aa11.81□□□□□ -0.52
TM9SF1-204ENST00000525592 HSPB8Q9UJY1 196 aa11.81□□□□□ -0.52
TM9SF1-204ENST00000525592 LPAP08519 4548 aa11.81□□□□□ -0.52
TM9SF1-204ENST00000525592 MYMXA0A1B0GTQ4 84 aa11.8□□□□□ -0.52
TM9SF1-204ENST00000525592 COLCA2A8K830 154 aa11.78□□□□□ -0.52
TM9SF1-204ENST00000525592 MIR7-3HGQ8N6C7 128 aa11.78□□□□□ -0.52
TM9SF1-204ENST00000525592 MAP1LC3CQ9BXW4 147 aa11.78□□□□□ -0.52
TM9SF1-204ENST00000525592 ANAPC11Q9NYG5 84 aa11.78□□□□□ -0.52
TM9SF1-204ENST00000525592 BOD1L2Q8IYS8 172 aa11.77□□□□□ -0.53
TM9SF1-204ENST00000525592 IGKV2D-26A0A0A0MRZ7 120 aa11.76□□□□□ -0.53
TM9SF1-204ENST00000525592 PRR4Q16378 134 aa11.76□□□□□ -0.53
TM9SF1-204ENST00000525592 KRTAP13-2Q52LG2 175 aa11.76□□□□□ -0.53
TM9SF1-204ENST00000525592 PLEKHB2Q96CS7 222 aa11.76□□□□□ -0.53
TM9SF1-204ENST00000525592 LEPROTO15243 131 aa11.75□□□□□ -0.53
TM9SF1-204ENST00000525592 DPM2O94777 84 aa11.75□□□□□ -0.53
TM9SF1-204ENST00000525592 PRYO14603 147 aa11.74□□□□□ -0.53
TM9SF1-204ENST00000525592 TSPAN13O95857 204 aa11.74□□□□□ -0.53
TM9SF1-204ENST00000525592 FABP4P15090 132 aa11.74□□□□□ -0.53
TM9SF1-204ENST00000525592 TSPEAR-AS2P59090 65 aa11.74□□□□□ -0.53
TM9SF1-204ENST00000525592 HERVK_113P61574 105 aa11.74□□□□□ -0.53
TM9SF1-204ENST00000525592 J3QQQ9 107 aa11.72□□□□□ -0.53
TM9SF1-204ENST00000525592 NMUP48645 174 aa11.72□□□□□ -0.53
TM9SF1-204ENST00000525592 HIGD2AQ9BW72 106 aa11.72□□□□□ -0.53
TM9SF1-204ENST00000525592 NCR3O14931 201 aa11.71□□□□□ -0.53
TM9SF1-204ENST00000525592 IGKCP01834 107 aa11.71□□□□□ -0.53
TM9SF1-204ENST00000525592 KCNQ1DNQ9H478 68 aa11.71□□□□□ -0.53
TM9SF1-204ENST00000525592 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
TM9SF1-204ENST00000525592 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
TM9SF1-204ENST00000525592 LINC00337Q8N6G1 96 aa11.7□□□□□ -0.54
TM9SF1-204ENST00000525592 LINC00304Q8N9R0 145 aa11.7□□□□□ -0.54
TM9SF1-204ENST00000525592 SPRR1AP35321 89 aa11.69□□□□□ -0.54
TM9SF1-204ENST00000525592 PMCHL2Q9BQD1 86 aa11.69□□□□□ -0.54
TM9SF1-204ENST00000525592 LGALS3P17931 250 aaKnown RBP11.68□□□□□ -0.54
TM9SF1-204ENST00000525592 CTAG1AP78358 180 aa11.68□□□□□ -0.54
TM9SF1-204ENST00000525592 S100A12P80511 92 aa11.68□□□□□ -0.54
TM9SF1-204ENST00000525592 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
TM9SF1-204ENST00000525592 TRBV10-3A0A0K0K1G6 114 aa11.66□□□□□ -0.54
TM9SF1-204ENST00000525592 TRBV10-2A0A0K0K1G8 114 aa11.66□□□□□ -0.54
TM9SF1-204ENST00000525592 DAND5Q8N907 189 aa11.66□□□□□ -0.54
TM9SF1-204ENST00000525592 SPRR4Q96PI1 79 aa11.66□□□□□ -0.54
TM9SF1-204ENST00000525592 ETDCA0A1B0GVM5 59 aa11.65□□□□□ -0.54
TM9SF1-204ENST00000525592 KRTAP4-16G5E9R7 235 aaPredicted RBP11.65□□□□□ -0.54
TM9SF1-204ENST00000525592 MIEN1Q9BRT3 115 aa11.65□□□□□ -0.54
TM9SF1-204ENST00000525592 HIST1H2BKO60814 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BJP06899 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BOP23527 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BBP33778 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BDP58876 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BCP62807 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST2H2BEQ16778 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BHQ93079 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BNQ99877 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 HIST1H2BMQ99879 126 aa11.64□□□□□ -0.55
TM9SF1-204ENST00000525592 SPANXB1Q9NS25 103 aaPredicted RBP11.63□□□□□ -0.55
TM9SF1-204ENST00000525592 E9PLD3 99 aa11.62□□□□□ -0.55
TM9SF1-204ENST00000525592 SYS1-DBNDD2H3BUS1 97 aa11.61□□□□□ -0.55
TM9SF1-204ENST00000525592 NDUFC2O95298 119 aa11.61□□□□□ -0.55
TM9SF1-204ENST00000525592 DDTP30046 118 aa11.61□□□□□ -0.55
TM9SF1-204ENST00000525592 C3orf22Q8N5N4 141 aa11.61□□□□□ -0.55
TM9SF1-204ENST00000525592 A0A0J9YXY3 114 aa11.58□□□□□ -0.56
TM9SF1-204ENST00000525592 SMCR5Q8TEV8 140 aa11.58□□□□□ -0.56
TM9SF1-204ENST00000525592 B5MCH6 92 aa11.57□□□□□ -0.56
TM9SF1-204ENST00000525592 SPAG11AQ6PDA7 123 aa11.57□□□□□ -0.56
TM9SF1-204ENST00000525592 IGLV6-57P01721 117 aa11.56□□□□□ -0.56
TM9SF1-204ENST00000525592 S100A7L2Q5SY68 101 aa11.56□□□□□ -0.56
TM9SF1-204ENST00000525592 LINC01545Q5VT33 79 aa11.56□□□□□ -0.56
TM9SF1-204ENST00000525592 LINC00483Q53H64 154 aa11.55□□□□□ -0.56
TM9SF1-204ENST00000525592 PET117Q6UWS5 81 aa11.55□□□□□ -0.56
TM9SF1-204ENST00000525592 RETNLBQ9BQ08 111 aa11.55□□□□□ -0.56
TM9SF1-204ENST00000525592 ADAMTSL4-AS1Q5T5F5 129 aa11.54□□□□□ -0.56
TM9SF1-204ENST00000525592 Q6ZRX8 168 aa11.54□□□□□ -0.56
TM9SF1-204ENST00000525592 SOSTDC1Q6X4U4 206 aa11.53□□□□□ -0.56
TM9SF1-204ENST00000525592 TRAV23DV6A0A075B6W5 121 aa11.51□□□□□ -0.57
TM9SF1-204ENST00000525592 TIMM17BO60830 172 aa11.51□□□□□ -0.57
TM9SF1-204ENST00000525592 C4orf48Q5BLP8 95 aa11.51□□□□□ -0.57
TM9SF1-204ENST00000525592 COA6Q5JTJ3 125 aaKnown RBP11.51□□□□□ -0.57
TM9SF1-204ENST00000525592 PPDPFQ9H3Y8 114 aa11.51□□□□□ -0.57
TM9SF1-204ENST00000525592 CBY1Q9Y3M2 126 aa11.51□□□□□ -0.57
TM9SF1-204ENST00000525592 EIF4EBP3O60516 100 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms