RNA–Protein interactions for RNA: ENST00000525537.2

ATM-208, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-208ENST00000525537 PPRC1Q5VV67 1664 aaKnown RBP0.84□□□□□ -2.27
ATM-208ENST00000525537 PKD1L3Q7Z443 1732 aa0.84□□□□□ -2.27
ATM-208ENST00000525537 KIF20BQ96Q89 1820 aa0.84□□□□□ -2.28
ATM-208ENST00000525537 H3BUT2 72 aa0.83□□□□□ -2.28
ATM-208ENST00000525537 SPRR1BP22528 89 aa0.83□□□□□ -2.28
ATM-208ENST00000525537 TSC2P49815 1807 aa0.82□□□□□ -2.28
ATM-208ENST00000525537 AKAP6Q13023 2319 aa0.82□□□□□ -2.28
ATM-208ENST00000525537 PTPRQQ9UMZ3 2332 aa0.82□□□□□ -2.28
ATM-208ENST00000525537 CSMD3Q7Z407 3707 aa0.82□□□□□ -2.28
ATM-208ENST00000525537 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.82□□□□□ -2.28
ATM-208ENST00000525537 DIP2BQ9P265 1576 aa0.82□□□□□ -2.28
ATM-208ENST00000525537 TMEM131LA2VDJ0 1609 aa0.82□□□□□ -2.28
ATM-208ENST00000525537 SPTBN1Q01082 2364 aaKnown RBP0.82□□□□□ -2.28
ATM-208ENST00000525537 SUPT6HQ7KZ85 1726 aaKnown RBP0.81□□□□□ -2.28
ATM-208ENST00000525537 PKDREJQ9NTG1 2253 aa0.81□□□□□ -2.28
ATM-208ENST00000525537 DCAF1Q9Y4B6 1507 aa0.81□□□□□ -2.28
ATM-208ENST00000525537 COX8AP10176 69 aa0.81□□□□□ -2.28
ATM-208ENST00000525537 SPRR1AP35321 89 aa0.81□□□□□ -2.28
ATM-208ENST00000525537 BVES-AS1Q5T3Y7 98 aa0.81□□□□□ -2.28
ATM-208ENST00000525537 SPTY2D1-AS1A0A0U1RR47 76 aa0.8□□□□□ -2.28
ATM-208ENST00000525537 LRRC9Q6ZRR7 1453 aa0.8□□□□□ -2.28
ATM-208ENST00000525537 I3L3M4 83 aa0.79□□□□□ -2.28
ATM-208ENST00000525537 GAFA1Q96PS6 74 aa0.79□□□□□ -2.28
ATM-208ENST00000525537 LRRC7Q96NW7 1537 aa0.79□□□□□ -2.28
ATM-208ENST00000525537 KDM5DQ9BY66 1539 aa0.79□□□□□ -2.28
ATM-208ENST00000525537 FMN2Q9NZ56 1722 aa0.78□□□□□ -2.28
ATM-208ENST00000525537 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
ATM-208ENST00000525537 TRAV21A0A0B4J279 112 aa0.78□□□□□ -2.28
ATM-208ENST00000525537 CPSF4LA6NMK7 179 aaKnown RBP0.78□□□□□ -2.28
ATM-208ENST00000525537 COX7BP24311 80 aa0.78□□□□□ -2.28
ATM-208ENST00000525537 DEFB109BQ30KR1 87 aa0.78□□□□□ -2.28
ATM-208ENST00000525537 NKTRP30414 1462 aaKnown RBP0.78□□□□□ -2.28
ATM-208ENST00000525537 GVINP1Q7Z2Y8 2422 aa0.77□□□□□ -2.29
ATM-208ENST00000525537 UNC79Q9P2D8 2635 aa0.77□□□□□ -2.29
ATM-208ENST00000525537 WFDC9Q8NEX5 89 aa0.76□□□□□ -2.29
ATM-208ENST00000525537 U3KQA8 63 aa0.76□□□□□ -2.29
ATM-208ENST00000525537 RRBP1Q9P2E9 1410 aaKnown RBP0.75□□□□□ -2.29
ATM-208ENST00000525537 FXYD6Q9H0Q3 95 aa0.75□□□□□ -2.29
ATM-208ENST00000525537 DEFB121Q5J5C9 76 aa0.74□□□□□ -2.29
ATM-208ENST00000525537 APLNQ9ULZ1 77 aa0.74□□□□□ -2.29
ATM-208ENST00000525537 COL14A1Q05707 1796 aaKnown RBP0.74□□□□□ -2.29
ATM-208ENST00000525537 DEFB105AQ8NG35 78 aa0.73□□□□□ -2.29
ATM-208ENST00000525537 MRPL34Q9BQ48 92 aaKnown RBP0.73□□□□□ -2.29
ATM-208ENST00000525537 RGPD1P0DJD0 1748 aa0.72□□□□□ -2.29
ATM-208ENST00000525537 NDUFB1O75438 58 aa0.72□□□□□ -2.29
ATM-208ENST00000525537 C18orf32Q8TCD1 76 aa0.72□□□□□ -2.29
ATM-208ENST00000525537 URB2Q14146 1524 aaKnown RBP0.72□□□□□ -2.29
ATM-208ENST00000525537 NCOA2Q15596 1464 aa0.72□□□□□ -2.29
ATM-208ENST00000525537 QSER1Q2KHR3 1735 aa0.72□□□□□ -2.29
ATM-208ENST00000525537 UBR3Q6ZT12 1888 aa0.71□□□□□ -2.3
ATM-208ENST00000525537 USP32Q8NFA0 1604 aa0.71□□□□□ -2.3
ATM-208ENST00000525537 RGPD2P0DJD1 1756 aa0.71□□□□□ -2.3
ATM-208ENST00000525537 ABCC1P33527 1531 aa0.71□□□□□ -2.3
ATM-208ENST00000525537 KLK9Q2XQG4 91 aa0.71□□□□□ -2.3
ATM-208ENST00000525537 VWFP04275 2813 aa0.71□□□□□ -2.3
ATM-208ENST00000525537 LRP1Q07954 4544 aaKnown RBP0.71□□□□□ -2.3
ATM-208ENST00000525537 ATP5EP2Q5VTU8 51 aa0.7□□□□□ -2.3
ATM-208ENST00000525537 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
ATM-208ENST00000525537 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
ATM-208ENST00000525537 CHD6Q8TD26 2715 aa0.68□□□□□ -2.3
ATM-208ENST00000525537 A0A087WXM4 84 aa0.68□□□□□ -2.3
ATM-208ENST00000525537 CLIP1P30622 1438 aa0.68□□□□□ -2.3
ATM-208ENST00000525537 RPL38P63173 70 aaKnown RBP0.68□□□□□ -2.3
ATM-208ENST00000525537 CFAP74Q9C0B2 1584 aa0.67□□□□□ -2.3
ATM-208ENST00000525537 ANKARQ7Z5J8 1434 aa0.67□□□□□ -2.3
ATM-208ENST00000525537 IFI6P09912 130 aa0.67□□□□□ -2.3
ATM-208ENST00000525537 SMIM13P0DJ93 91 aa0.67□□□□□ -2.3
ATM-208ENST00000525537 MUC5BQ9HC84 5762 aaPredicted RBP0.67□□□□□ -2.3
ATM-208ENST00000525537 ZNF831Q5JPB2 1677 aa0.66□□□□□ -2.3
ATM-208ENST00000525537 TENM4Q6N022 2769 aa0.66□□□□□ -2.3
ATM-208ENST00000525537 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
ATM-208ENST00000525537 SPINK4O60575 86 aa0.66□□□□□ -2.3
ATM-208ENST00000525537 H1FX-AS1Q4G0G2 97 aa0.66□□□□□ -2.3
ATM-208ENST00000525537 NCOR1O75376 2440 aa0.66□□□□□ -2.3
ATM-208ENST00000525537 NCOR2Q9Y618 2525 aa0.66□□□□□ -2.3
ATM-208ENST00000525537 CEP170BQ9Y4F5 1589 aaPredicted RBP0.66□□□□□ -2.3
ATM-208ENST00000525537 UMAD1C9J7I0 102 aa0.65□□□□□ -2.31
ATM-208ENST00000525537 CCL22O00626 93 aa0.65□□□□□ -2.31
ATM-208ENST00000525537 PIK3C2BO00750 1634 aa0.64□□□□□ -2.31
ATM-208ENST00000525537 IGSF10Q6WRI0 2623 aa0.64□□□□□ -2.31
ATM-208ENST00000525537 MAP3K1Q13233 1512 aa0.64□□□□□ -2.31
ATM-208ENST00000525537 PHGR1C9JFL3 82 aa0.63□□□□□ -2.31
ATM-208ENST00000525537 IFI27P40305 119 aaPredicted RBP0.63□□□□□ -2.31
ATM-208ENST00000525537 LELP1Q5T871 98 aa0.63□□□□□ -2.31
ATM-208ENST00000525537 HEPN1Q6WQI6 88 aa0.63□□□□□ -2.31
ATM-208ENST00000525537 LTN1O94822 1766 aa0.62□□□□□ -2.31
ATM-208ENST00000525537 BCORQ6W2J9 1755 aa0.62□□□□□ -2.31
ATM-208ENST00000525537 MAST4O15021 2626 aa0.62□□□□□ -2.31
ATM-208ENST00000525537 CELSR1Q9NYQ6 3014 aa0.61□□□□□ -2.31
ATM-208ENST00000525537 UBR5O95071 2799 aaPredicted RBP0.61□□□□□ -2.31
ATM-208ENST00000525537 MAGI3Q5TCQ9 1506 aa0.6□□□□□ -2.31
ATM-208ENST00000525537 NREPQ16612 68 aa0.6□□□□□ -2.31
ATM-208ENST00000525537 POLR1AO95602 1720 aaPredicted RBP0.6□□□□□ -2.31
ATM-208ENST00000525537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.59□□□□□ -2.31
ATM-208ENST00000525537 ABCA8O94911 1581 aa0.59□□□□□ -2.31
ATM-208ENST00000525537 ATRQ13535 2644 aa0.58□□□□□ -2.32
ATM-208ENST00000525537 CSPG4Q6UVK1 2322 aa0.58□□□□□ -2.32
ATM-208ENST00000525537 SMCO4Q9NRQ5 59 aa0.58□□□□□ -2.32
ATM-208ENST00000525537 CDKN2A-AS1Q9UH64 79 aa0.58□□□□□ -2.32
ATM-208ENST00000525537 WNK2Q9Y3S1 2297 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms