RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 SPANXB1Q9NS25 103 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC4-204ENST00000524797 LINC00474Q9P2X8 69 aa7.02□□□□□ -1.29
TRAPPC4-204ENST00000524797 LOC107984640A0A0U1RRK4 108 aa7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 SPAG11BQ08648 103 aa7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 Q8N8P6 123 aa7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 CAMK2N2Q96S95 79 aa7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 PYGO1Q9Y3Y4 419 aa7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 IGLV4-3A0A075B6K6 122 aa7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 FXYD2P54710 66 aa7.01□□□□□ -1.29
TRAPPC4-204ENST00000524797 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
TRAPPC4-204ENST00000524797 E9PLD3 99 aa7□□□□□ -1.29
TRAPPC4-204ENST00000524797 CEND1Q8N111 149 aa7□□□□□ -1.29
TRAPPC4-204ENST00000524797 TMEM126AQ9H061 195 aa7□□□□□ -1.29
TRAPPC4-204ENST00000524797 GAGE2BQ13066 116 aa6.99□□□□□ -1.29
TRAPPC4-204ENST00000524797 TAL2Q16559 108 aa6.99□□□□□ -1.29
TRAPPC4-204ENST00000524797 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
TRAPPC4-204ENST00000524797 PPDPFQ9H3Y8 114 aa6.99□□□□□ -1.29
TRAPPC4-204ENST00000524797 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
TRAPPC4-204ENST00000524797 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
TRAPPC4-204ENST00000524797 TMEM141Q96I45 108 aa6.98□□□□□ -1.29
TRAPPC4-204ENST00000524797 A0A0J9YXV3 536 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 K7ERJ3 54 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 ORMDL2Q53FV1 153 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 C2orf66Q6UXQ4 117 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 ATP5LO75964 103 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 IGKCP01834 107 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 LINC00242Q5T6M2 205 aa6.97□□□□□ -1.29
TRAPPC4-204ENST00000524797 H3BMG7 143 aa6.96□□□□□ -1.3
TRAPPC4-204ENST00000524797 K7EMI3 77 aa6.96□□□□□ -1.3
TRAPPC4-204ENST00000524797 UBE2D1P51668 147 aa6.96□□□□□ -1.3
TRAPPC4-204ENST00000524797 ZC2HC1BQ5TFG8 222 aa6.96□□□□□ -1.3
TRAPPC4-204ENST00000524797 NXT2Q9NPJ8 142 aaKnown RBP6.96□□□□□ -1.3
TRAPPC4-204ENST00000524797 MRPL35Q9NZE8 188 aaKnown RBP6.96□□□□□ -1.3
TRAPPC4-204ENST00000524797 A0A087WZ39 114 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 IGKV2D-26A0A0A0MRZ7 120 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 A0A1W2PNN7 141 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 NDUFA1O15239 70 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 DPM2O94777 84 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 RPL18AQ02543 176 aaKnown RBP6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 C10orf25Q5T742 122 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 AMELXQ99217 191 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 LINC01546A6NGU7 62 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
TRAPPC4-204ENST00000524797 A0A1B0GWB2 263 aa6.94□□□□□ -1.3
TRAPPC4-204ENST00000524797 IGIPA6NJ69 53 aa6.94□□□□□ -1.3
TRAPPC4-204ENST00000524797 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
TRAPPC4-204ENST00000524797 UNQ6190/PRO20217Q6UXQ8 127 aa6.94□□□□□ -1.3
TRAPPC4-204ENST00000524797 LINC01561Q8N1V8 128 aa6.94□□□□□ -1.3
TRAPPC4-204ENST00000524797 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
TRAPPC4-204ENST00000524797 PRO0461Q9UI25 63 aa6.94□□□□□ -1.3
TRAPPC4-204ENST00000524797 C9orf116Q5BN46 136 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC4-204ENST00000524797 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
TRAPPC4-204ENST00000524797 TLX1NBP0CAT3 122 aa6.93□□□□□ -1.3
TRAPPC4-204ENST00000524797 Q6ZRP5 223 aa6.93□□□□□ -1.3
TRAPPC4-204ENST00000524797 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
TRAPPC4-204ENST00000524797 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
TRAPPC4-204ENST00000524797 SPANXCQ9NY87 97 aa6.93□□□□□ -1.3
TRAPPC4-204ENST00000524797 TOMM6Q96B49 74 aa6.92□□□□□ -1.3
TRAPPC4-204ENST00000524797 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
TRAPPC4-204ENST00000524797 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
TRAPPC4-204ENST00000524797 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
TRAPPC4-204ENST00000524797 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
TRAPPC4-204ENST00000524797 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
TRAPPC4-204ENST00000524797 PLNP26678 52 aa6.9□□□□□ -1.3
TRAPPC4-204ENST00000524797 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
TRAPPC4-204ENST00000524797 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
TRAPPC4-204ENST00000524797 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
TRAPPC4-204ENST00000524797 SPINK6Q6UWN8 80 aa6.9□□□□□ -1.3
TRAPPC4-204ENST00000524797 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
TRAPPC4-204ENST00000524797 TRBV30A0A0K0K1B3 111 aa6.89□□□□□ -1.31
TRAPPC4-204ENST00000524797 FAM168BA1KXE4 195 aa6.89□□□□□ -1.31
TRAPPC4-204ENST00000524797 SCGB3A1Q96QR1 104 aa6.89□□□□□ -1.31
TRAPPC4-204ENST00000524797 PSORS1C2Q9UIG4 136 aa6.89□□□□□ -1.31
TRAPPC4-204ENST00000524797 A0A1B0GX51 115 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 MT-ATP8P03928 68 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 HERVK_113P63121 156 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 GAGE2EQ4V326 116 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 PPDPFLQ8WWR9 84 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 GAGE2DQ9UEU5 116 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 PRSS2P07478 247 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 NDUFV3P56181 108 aaKnown RBP6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 Q6Q795 121 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 TOMM7Q9P0U1 55 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 CDKN2A-AS1Q9UH64 79 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 PLA2G2DQ9UNK4 145 aa6.88□□□□□ -1.31
TRAPPC4-204ENST00000524797 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
TRAPPC4-204ENST00000524797 J3KT08 172 aa6.87□□□□□ -1.31
TRAPPC4-204ENST00000524797 SEC61GP60059 68 aa6.87□□□□□ -1.31
TRAPPC4-204ENST00000524797 REG3GQ6UW15 175 aa6.87□□□□□ -1.31
TRAPPC4-204ENST00000524797 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC4-204ENST00000524797 Q8IZM0 81 aa6.87□□□□□ -1.31
TRAPPC4-204ENST00000524797 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 NDUFC2-KCTD14E9PQ53 114 aa6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 KRTAP7-1Q8IUC3 87 aa6.86□□□□□ -1.31
TRAPPC4-204ENST00000524797 TRAV12-1A0A0B4J245 112 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 618.8 ms