RNA–Protein interactions for RNA: ENST00000523622.1

NPM1-211, Transcript of nucleophosmin 1, humanhuman

TSL 3

Gene NPM1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-211ENST00000523622 CCL19Q99731 98 aa3.5□□□□□ -1.85
NPM1-211ENST00000523622 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
NPM1-211ENST00000523622 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
NPM1-211ENST00000523622 DEFB131BA0A096LNP1 70 aa3.49□□□□□ -1.85
NPM1-211ENST00000523622 INE1O15225 51 aa3.49□□□□□ -1.85
NPM1-211ENST00000523622 LINC00158P58513 81 aa3.49□□□□□ -1.85
NPM1-211ENST00000523622 PDE4DIPQ5VU43 2346 aa3.48□□□□□ -1.85
NPM1-211ENST00000523622 NDUFA1O15239 70 aa3.48□□□□□ -1.85
NPM1-211ENST00000523622 MRPL33O75394 65 aaKnown RBP3.48□□□□□ -1.85
NPM1-211ENST00000523622 KRTAP11-1Q8IUC1 163 aa3.48□□□□□ -1.85
NPM1-211ENST00000523622 FN1P02751 2386 aaKnown RBP3.48□□□□□ -1.85
NPM1-211ENST00000523622 KNTC1P50748 2209 aa3.47□□□□□ -1.85
NPM1-211ENST00000523622 KRTAP4-8A0A0G2JLE6 195 aa3.47□□□□□ -1.85
NPM1-211ENST00000523622 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
NPM1-211ENST00000523622 Q8N9L7 120 aa3.46□□□□□ -1.86
NPM1-211ENST00000523622 SMIM11BQ8TCY0 68 aa3.46□□□□□ -1.86
NPM1-211ENST00000523622 IGKV2D-30A0A075B6S6 120 aa3.45□□□□□ -1.86
NPM1-211ENST00000523622 MAPK1IP1LQ8NDC0 245 aa3.45□□□□□ -1.86
NPM1-211ENST00000523622 G3V318 75 aa3.44□□□□□ -1.86
NPM1-211ENST00000523622 M0R2N4 97 aa3.44□□□□□ -1.86
NPM1-211ENST00000523622 GAS8-AS1O95177 125 aa3.43□□□□□ -1.86
NPM1-211ENST00000523622 LY6G6CO95867 125 aa3.43□□□□□ -1.86
NPM1-211ENST00000523622 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
NPM1-211ENST00000523622 COL4A4P53420 1690 aaPredicted RBP3.43□□□□□ -1.86
NPM1-211ENST00000523622 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.42□□□□□ -1.86
NPM1-211ENST00000523622 CDKN2A-AS1Q9UH64 79 aa3.42□□□□□ -1.86
NPM1-211ENST00000523622 AHCTF1Q8WYP5 2266 aa3.41□□□□□ -1.86
NPM1-211ENST00000523622 LOC730098B7Z3J9 87 aa3.41□□□□□ -1.86
NPM1-211ENST00000523622 H3BSH0 61 aa3.41□□□□□ -1.86
NPM1-211ENST00000523622 PRB3Q04118 309 aaPredicted RBP3.41□□□□□ -1.86
NPM1-211ENST00000523622 Q6ZRX8 168 aa3.41□□□□□ -1.86
NPM1-211ENST00000523622 Q8IZM0 81 aa3.41□□□□□ -1.86
NPM1-211ENST00000523622 KRTAP4-12Q9BQ66 201 aa3.41□□□□□ -1.86
NPM1-211ENST00000523622 PTPRQQ9UMZ3 2332 aa3.41□□□□□ -1.86
NPM1-211ENST00000523622 ASXL3Q9C0F0 2248 aa3.4□□□□□ -1.86
NPM1-211ENST00000523622 IGKV2-28A0A075B6P5 120 aa3.4□□□□□ -1.87
NPM1-211ENST00000523622 IGKV2D-28P01615 120 aa3.4□□□□□ -1.87
NPM1-211ENST00000523622 PRO3102Q9H379 93 aa3.39□□□□□ -1.87
NPM1-211ENST00000523622 GPR179Q6PRD1 2367 aa3.39□□□□□ -1.87
NPM1-211ENST00000523622 CNOT1A5YKK6 2376 aaKnown RBP3.38□□□□□ -1.87
NPM1-211ENST00000523622 IGKV2D-24A0A075B6R9 120 aa3.38□□□□□ -1.87
NPM1-211ENST00000523622 SPTY2D1-AS1A0A0U1RR47 76 aa3.38□□□□□ -1.87
NPM1-211ENST00000523622 ANGP03950 147 aaKnown RBP3.38□□□□□ -1.87
NPM1-211ENST00000523622 GVQW2A0A096LPI5 108 aaPredicted RBP3.37□□□□□ -1.87
NPM1-211ENST00000523622 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
NPM1-211ENST00000523622 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
NPM1-211ENST00000523622 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
NPM1-211ENST00000523622 A0A096LNT2 108 aa3.34□□□□□ -1.87
NPM1-211ENST00000523622 DOPEY2Q9Y3R5 2298 aa3.33□□□□□ -1.88
NPM1-211ENST00000523622 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.33□□□□□ -1.882e-37■■■■■ 30.5
NPM1-211ENST00000523622 KRTAP29-1A8MX34 341 aaPredicted RBP3.32□□□□□ -1.88
NPM1-211ENST00000523622 ALMS1Q8TCU4 4167 aa3.31□□□□□ -1.88
NPM1-211ENST00000523622 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
NPM1-211ENST00000523622 C10orf99Q6UWK7 81 aa3.31□□□□□ -1.88
NPM1-211ENST00000523622 LINC00575Q6W349 94 aa3.3□□□□□ -1.88
NPM1-211ENST00000523622 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
NPM1-211ENST00000523622 KRTAP17-1Q9BYP8 105 aa3.3□□□□□ -1.88
NPM1-211ENST00000523622 CACNA1EQ15878 2313 aa3.29□□□□□ -1.88
NPM1-211ENST00000523622 KNL1Q8NG31 2342 aa3.29□□□□□ -1.88
NPM1-211ENST00000523622 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
NPM1-211ENST00000523622 CRIPTQ9P021 101 aa3.29□□□□□ -1.88
NPM1-211ENST00000523622 RPL39P62891 51 aaKnown RBP3.28□□□□□ -1.88
NPM1-211ENST00000523622 DSCR10P59022 87 aa3.27□□□□□ -1.89
NPM1-211ENST00000523622 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
NPM1-211ENST00000523622 KRTAP19-1Q8IUB9 90 aa3.27□□□□□ -1.89
NPM1-211ENST00000523622 ASCC3Q8N3C0 2202 aaKnown RBP3.26□□□□□ -1.89
NPM1-211ENST00000523622 LYNX1G3V0Z9 82 aa3.26□□□□□ -1.89
NPM1-211ENST00000523622 RPS27P42677 84 aaKnown RBP3.26□□□□□ -1.89
NPM1-211ENST00000523622 SPINK9Q5DT21 86 aa3.26□□□□□ -1.89
NPM1-211ENST00000523622 IGFL1Q6UW32 110 aa3.26□□□□□ -1.89
NPM1-211ENST00000523622 RPL39LQ96EH5 51 aaKnown RBP3.26□□□□□ -1.89
NPM1-211ENST00000523622 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
NPM1-211ENST00000523622 TRIOBPQ9H2D6 2365 aa3.26□□□□□ -1.89
NPM1-211ENST00000523622 KRTAP10-2P60368 255 aa3.25□□□□□ -1.89
NPM1-211ENST00000523622 KRTAP13-2Q52LG2 175 aa3.25□□□□□ -1.89
NPM1-211ENST00000523622 COL6A6A6NMZ7 2263 aa3.24□□□□□ -1.89
NPM1-211ENST00000523622 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
NPM1-211ENST00000523622 I3L2K1 104 aa3.23□□□□□ -1.89
NPM1-211ENST00000523622 K7EQZ3 153 aa3.23□□□□□ -1.89
NPM1-211ENST00000523622 PP632Q6XCG6 107 aa3.22□□□□□ -1.89
NPM1-211ENST00000523622 KRTAP4-9Q9BYQ8 210 aa3.22□□□□□ -1.89
NPM1-211ENST00000523622 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
NPM1-211ENST00000523622 ICE1Q9Y2F5 2266 aa3.22□□□□□ -1.89
NPM1-211ENST00000523622 PIGYQ3MUY2 71 aa3.21□□□□□ -1.9
NPM1-211ENST00000523622 PCOTHQ58A44 107 aa3.21□□□□□ -1.9
NPM1-211ENST00000523622 MINOS1Q5TGZ0 78 aa3.21□□□□□ -1.9
NPM1-211ENST00000523622 PRCDQ00LT1 54 aa3.19□□□□□ -1.9
NPM1-211ENST00000523622 PRR9Q5T870 116 aa3.19□□□□□ -1.9
NPM1-211ENST00000523622 C6orf48Q9UBA6 75 aa3.19□□□□□ -1.9
NPM1-211ENST00000523622 ATRXP46100 2492 aa3.19□□□□□ -1.9
NPM1-211ENST00000523622 IGKV2-24A0A0C4DH68 120 aa3.18□□□□□ -1.9
NPM1-211ENST00000523622 PLCE1Q9P212 2302 aa3.18□□□□□ -1.9
NPM1-211ENST00000523622 H0YAA0 97 aa3.17□□□□□ -1.9
NPM1-211ENST00000523622 CCL22O00626 93 aa3.17□□□□□ -1.9
NPM1-211ENST00000523622 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
NPM1-211ENST00000523622 WFDC13Q8IUB5 93 aa3.17□□□□□ -1.9
NPM1-211ENST00000523622 LEAP2Q969E1 77 aa3.17□□□□□ -1.9
NPM1-211ENST00000523622 MRPL34Q9BQ48 92 aaKnown RBP3.17□□□□□ -1.9
NPM1-211ENST00000523622 SPINK13Q1W4C9 94 aa3.16□□□□□ -1.9
NPM1-211ENST00000523622 UBE2DNLQ8IWF7 75 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms