RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 CST9LQ9H4G1 147 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 SPANXA1Q9NS26 97 aa2.26□□□□□ -2.05
NPM1-210ENST00000523339 CSDC2Q9Y534 153 aaKnown RBP2.26□□□□□ -2.05
NPM1-210ENST00000523339 TRAV12-1A0A0B4J245 112 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 IGHV3OR16-9A0A0B4J2B5 98 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 LINC00959A0A1B0GUT2 108 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 K7EMI3 77 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 LEPROTL1O95214 131 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 SEC61BP60468 96 aaKnown RBP2.25□□□□□ -2.05
NPM1-210ENST00000523339 KRTDAPP60985 99 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 JOSD1Q15040 202 aaPredicted RBP2.25□□□□□ -2.05
NPM1-210ENST00000523339 TPRXLQ17RH7 258 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 TEX43Q6ZNM6 134 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 PHF5AQ7RTV0 110 aaKnown RBP2.25□□□□□ -2.05
NPM1-210ENST00000523339 C15orf56Q8N910 161 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 TMEM141Q96I45 108 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 SCGB3A1Q96QR1 104 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 KIR2DL4Q99706 377 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 CYSLTR1Q9Y271 337 aa2.25□□□□□ -2.05
NPM1-210ENST00000523339 TRAV13-1A0A0B4J241 112 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 IGLV5-39A0A0G2JS06 123 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 LOC107984640A0A0U1RRK4 108 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 TMEM223A0PJW6 202 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 SMIM1B2RUZ4 78 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 H0Y8G0 127 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 H7C423 109 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 SYCNQ0VAF6 134 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 KIAA0087Q14695 138 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 C9orf116Q5BN46 136 aaPredicted RBP2.24□□□□□ -2.05
NPM1-210ENST00000523339 AMMECR1LQ6DCA0 310 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 Q8NDZ9 215 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 OR5A1Q8NGJ0 315 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 CHCHD10Q8WYQ3 142 aaPredicted RBP2.24□□□□□ -2.05
NPM1-210ENST00000523339 LINC00526Q96FQ7 95 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 PPDPFQ9H3Y8 114 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 CDKN2A-AS1Q9UH64 79 aa2.24□□□□□ -2.05
NPM1-210ENST00000523339 GVQW2A0A096LPI5 108 aaPredicted RBP2.23□□□□□ -2.05
NPM1-210ENST00000523339 F8VRH5 84 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.23□□□□□ -2.05
NPM1-210ENST00000523339 CCL25O15444 150 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 ATP5LO75964 103 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 S100A6P06703 90 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 SPINK8P0C7L1 97 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 ZNF25P17030 456 aaPredicted RBP2.23□□□□□ -2.05
NPM1-210ENST00000523339 XCL1P47992 114 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 PMVKQ15126 192 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 PET117Q6UWS5 81 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 C2orf91Q6ZV80 131 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 C5orf38Q86SI9 138 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 KRTAP7-1Q8IUC3 87 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 PCP2Q8IVA1 136 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 LINC00518Q8N0U6 118 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 TMEM101Q96IK0 257 aa2.23□□□□□ -2.05
NPM1-210ENST00000523339 CHTOPQ9Y3Y2 248 aaKnown RBP2.23□□□□□ -2.05
NPM1-210ENST00000523339 IGHV1-58A0A0C4DH39 117 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 TINCRA0A1B0GVN0 87 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 A0A1W2PNN7 141 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 S100A2P29034 98 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 AKR1D1P51857 326 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 FAM19A5Q7Z5A7 132 aaPredicted RBP2.22□□□□□ -2.05
NPM1-210ENST00000523339 LINC00304Q8N9R0 145 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 ZNF625Q96I27 306 aaPredicted RBP2.22□□□□□ -2.05
NPM1-210ENST00000523339 CAMK2N2Q96S95 79 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 LITAFQ99732 161 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 VCX2Q9H322 139 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 HSPB8Q9UJY1 196 aa2.22□□□□□ -2.05
NPM1-210ENST00000523339 E9PLD3 99 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 DPM2O94777 84 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 APOMO95445 188 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 IGKCP01834 107 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 KRTAP1-4P0C5Y4 121 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 SMIM6P0DI80 62 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 ADAMTSL4-AS1Q5T5F5 129 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 CD164L2Q6UWJ8 174 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 C2orf82Q6UX34 121 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 SOSTDC1Q6X4U4 206 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 COX6B2Q6YFQ2 88 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 Q6ZN92 141 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 C12orf57Q99622 126 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 MAP1LC3CQ9BXW4 147 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 PRO1933Q9H354 126 aa2.21□□□□□ -2.06
NPM1-210ENST00000523339 MUC17Q685J3 4493 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 SCGB1D1O95968 90 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 PCP4P48539 62 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 ASB16-AS1Q495Z4 193 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 UNQ6190/PRO20217Q6UXQ8 127 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 LINC00469Q8N7U9 141 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 C14orf144Q96I85 54 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 C6orf48Q9UBA6 75 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 PAM16Q9Y3D7 125 aa2.2□□□□□ -2.06
NPM1-210ENST00000523339 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
NPM1-210ENST00000523339 USH2AO75445 5202 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 A0A0J9YXY3 114 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 M0QXV9 152 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 LEPROTO15243 131 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 ZNF861PO60384 105 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 COX8AP10176 69 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 PLNP26678 52 aa2.19□□□□□ -2.06
NPM1-210ENST00000523339 RPL28P46779 137 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms