RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 PRB1P04280 392 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 ATXN8Q156A1 80 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 LYPD1Q8N2G4 141 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 SMIM4Q8WVI0 70 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 PPP1R1CQ8WVI7 109 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 TLN1Q9Y490 2541 aaKnown RBP2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 SPTA1P02549 2419 aa2.28□□□□□ -2.04
CTNNA1-238ENST00000523298 ALPK2Q86TB3 2170 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 DSPP15924 2871 aaKnown RBP2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 HMGN4O00479 90 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 ARMS2P0C7Q2 107 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 S100A3P33764 101 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 SSBP1Q04837 148 aaKnown RBP2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 GDF5OSQ5U4N7 250 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 KRTAP5-2Q701N4 177 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 FDCSPQ8NFU4 85 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 ICE1Q9Y2F5 2266 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 DMXL2Q8TDJ6 3036 aa2.27□□□□□ -2.05
CTNNA1-238ENST00000523298 HIVEP2P31629 2446 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 A0A0J9YX75 114 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 TRBV7-4A0A0J9YYF1 115 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 LEPROTL1O95214 131 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 SAA2P0DJI9 122 aaPredicted RBP2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 KRTAP25-1Q3LHN0 102 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 C2orf82Q6UX34 121 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 C9orf163Q8N9P6 203 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 NMES1Q9C002 83 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 LENEPQ9Y5L5 61 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 LHFPL6Q9Y693 200 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 IGSF10Q6WRI0 2623 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 RTTNQ86VV8 2226 aa2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 KMT2BQ9UMN6 2715 aaPredicted RBP2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 NCOA6Q14686 2063 aaPredicted RBP2.26□□□□□ -2.05
CTNNA1-238ENST00000523298 PKDREJQ9NTG1 2253 aa2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 FREM2Q5SZK8 3169 aa2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 LINC01549A6NIU2 74 aa2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 ELOF1P60002 83 aaKnown RBP2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 ERHP84090 104 aaKnown RBP2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 C1orf137Q5JT78 98 aa2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 CMC2Q9NRP2 79 aa2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 PRRC2CQ9Y520 2896 aaKnown RBP2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 LOC400499M0QZD8 3231 aa2.25□□□□□ -2.05
CTNNA1-238ENST00000523298 A0A0J9YY99 117 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 NUPR2A6NF83 97 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 HIGD1CA8MV81 97 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 PPYP01298 95 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 LINC00304Q8N9R0 145 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 DMAC1Q96GE9 116 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 PRR15LQ9BU68 103 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 SNURFQ9Y675 71 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 ATMQ13315 3056 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 BSNQ9UPA5 3926 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 AKAP6Q13023 2319 aa2.24□□□□□ -2.05
CTNNA1-238ENST00000523298 CHD6Q8TD26 2715 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 NBEAQ8NFP9 2946 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 IGKV3-7A0A075B6H7 116 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 A0A087WVE0 104 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 IGHV3-30P01768 117 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 PRH1P02810 166 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 IGHV3-30-5P0DP03 117 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 CADP27708 2225 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 ITPR1Q14643 2758 aa2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 FASNP49327 2511 aaKnown RBP2.23□□□□□ -2.05
CTNNA1-238ENST00000523298 ABCA4P78363 2273 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 ZZEF1O43149 2961 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 ZNF462Q96JM2 2506 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 ROS1P08922 2347 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 SPENQ96T58 3664 aaKnown RBP2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 SPTAN1Q13813 2472 aaKnown RBP2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 D6R8Y8 96 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 MUSTN1Q8IVN3 82 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 ZNF563Q8TA94 476 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 TTTY12Q9BZ98 90 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 MRPL36Q9P0J6 103 aaKnown RBP2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 ORMDL1Q9P0S3 153 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 CR1P17927 2039 aa2.22□□□□□ -2.05
CTNNA1-238ENST00000523298 BOD1L1Q8NFC6 3051 aa2.21□□□□□ -2.05
CTNNA1-238ENST00000523298 ARHGAP32A7KAX9 2087 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 TRBV6-5A0A0K0K1A5 114 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 PPP1R17O96001 155 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 CNBPP62633 177 aaKnown RBP2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 PDE6HQ13956 83 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 Q86TA4 180 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 WFDC6Q9BQY6 131 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 PLCE1Q9P212 2302 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 CFAP47Q6ZTR5 3102 aa2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 SMG1Q96Q15 3661 aaKnown RBP2.21□□□□□ -2.06
CTNNA1-238ENST00000523298 MYO18BQ8IUG5 2567 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 TRBV30A0A0K0K1B3 111 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 CPSF4LA6NMK7 179 aaKnown RBP2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 SPAG11BQ08648 103 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 FAM74A4Q5TZK3 123 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 SPAG11AQ6PDA7 123 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 SPINT4Q6UDR6 99 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 Q9BRP9 147 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 PLAC8Q9NZF1 115 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 PRO2289Q9P1D8 64 aa2.2□□□□□ -2.06
CTNNA1-238ENST00000523298 ARFGEF3Q5TH69 2177 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms