RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
ARFGAP1-216ENST00000522959 COX7B2Q8TF08 81 aa9.41□□□□□ -0.9
ARFGAP1-216ENST00000522959 TMA7Q9Y2S6 64 aaKnown RBP9.41□□□□□ -0.9
ARFGAP1-216ENST00000522959 C6orf226Q5I0X4 101 aa9.4□□□□□ -0.9
ARFGAP1-216ENST00000522959 PMCHL2Q9BQD1 86 aa9.4□□□□□ -0.9
ARFGAP1-216ENST00000522959 M0QXV9 152 aa9.39□□□□□ -0.91
ARFGAP1-216ENST00000522959 HERVK_113P61574 105 aa9.39□□□□□ -0.91
ARFGAP1-216ENST00000522959 CKS1BP61024 79 aa9.38□□□□□ -0.91
ARFGAP1-216ENST00000522959 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
ARFGAP1-216ENST00000522959 RNF213Q63HN8 5207 aa9.37□□□□□ -0.91
ARFGAP1-216ENST00000522959 KRTAP1-4P0C5Y4 121 aa9.37□□□□□ -0.91
ARFGAP1-216ENST00000522959 PRR26Q8N8Z3 221 aa9.37□□□□□ -0.91
ARFGAP1-216ENST00000522959 LEPROTO15243 131 aa9.36□□□□□ -0.91
ARFGAP1-216ENST00000522959 E9PLD3 99 aa9.35□□□□□ -0.91
ARFGAP1-216ENST00000522959 PLEKHB2Q96CS7 222 aa9.35□□□□□ -0.91
ARFGAP1-216ENST00000522959 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
ARFGAP1-216ENST00000522959 H0Y9J4 135 aa9.34□□□□□ -0.91
ARFGAP1-216ENST00000522959 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
ARFGAP1-216ENST00000522959 NMUP48645 174 aa9.33□□□□□ -0.92
ARFGAP1-216ENST00000522959 J3QQQ9 107 aa9.32□□□□□ -0.92
ARFGAP1-216ENST00000522959 UBE2BP63146 152 aa9.32□□□□□ -0.92
ARFGAP1-216ENST00000522959 DIRC1Q969H9 104 aa9.32□□□□□ -0.92
ARFGAP1-216ENST00000522959 TSPEAR-AS2P59090 65 aa9.31□□□□□ -0.92
ARFGAP1-216ENST00000522959 HERV-K104P63124 156 aa9.31□□□□□ -0.92
ARFGAP1-216ENST00000522959 COX17Q14061 63 aa9.3□□□□□ -0.92
ARFGAP1-216ENST00000522959 NDUFA12Q9UI09 145 aa9.3□□□□□ -0.92
ARFGAP1-216ENST00000522959 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
ARFGAP1-216ENST00000522959 SCGB1D1O95968 90 aa9.29□□□□□ -0.92
ARFGAP1-216ENST00000522959 LGALS3P17931 250 aaKnown RBP9.29□□□□□ -0.92
ARFGAP1-216ENST00000522959 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
ARFGAP1-216ENST00000522959 ATOH7Q8N100 152 aa9.29□□□□□ -0.92
ARFGAP1-216ENST00000522959 LINC00587B1AMM8 73 aa9.27□□□□□ -0.93
ARFGAP1-216ENST00000522959 HSBP1L1C9JCN9 74 aa9.27□□□□□ -0.93
ARFGAP1-216ENST00000522959 LINC00167Q96N53 147 aa9.27□□□□□ -0.93
ARFGAP1-216ENST00000522959 ERG28Q9UKR5 140 aa9.27□□□□□ -0.93
ARFGAP1-216ENST00000522959 ANKRD39Q53RE8 183 aa9.26□□□□□ -0.93
ARFGAP1-216ENST00000522959 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
ARFGAP1-216ENST00000522959 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
ARFGAP1-216ENST00000522959 ZNF861PO60384 105 aa9.25□□□□□ -0.93
ARFGAP1-216ENST00000522959 MRPL55Q7Z7F7 128 aaKnown RBP9.25□□□□□ -0.93
ARFGAP1-216ENST00000522959 TP73-AS1Q9UF72 201 aa9.25□□□□□ -0.93
ARFGAP1-216ENST00000522959 Q8NDZ9 215 aa9.24□□□□□ -0.93
ARFGAP1-216ENST00000522959 GAGE10A6NGK3 116 aa9.23□□□□□ -0.93
ARFGAP1-216ENST00000522959 IGLV5-37A0A075B6J1 123 aa9.22□□□□□ -0.93
ARFGAP1-216ENST00000522959 PYY3Q5JQD4 70 aa9.22□□□□□ -0.93
ARFGAP1-216ENST00000522959 IGLV1-50A0A075B6I6 118 aa9.21□□□□□ -0.94
ARFGAP1-216ENST00000522959 ZNF815PA8K554 130 aa9.21□□□□□ -0.94
ARFGAP1-216ENST00000522959 PFN2P35080 140 aa9.21□□□□□ -0.94
ARFGAP1-216ENST00000522959 LBHQ53QV2 105 aaPredicted RBP9.21□□□□□ -0.94
ARFGAP1-216ENST00000522959 MEIG1Q5JSS6 88 aa9.21□□□□□ -0.94
ARFGAP1-216ENST00000522959 A0A087X002 238 aa9.2□□□□□ -0.94
ARFGAP1-216ENST00000522959 A0A0J9YXY3 114 aa9.2□□□□□ -0.94
ARFGAP1-216ENST00000522959 BCE1O60756 84 aa9.2□□□□□ -0.94
ARFGAP1-216ENST00000522959 TIMM17BO60830 172 aa9.2□□□□□ -0.94
ARFGAP1-216ENST00000522959 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
ARFGAP1-216ENST00000522959 VAMP8Q9BV40 100 aa9.2□□□□□ -0.94
ARFGAP1-216ENST00000522959 SMIM13P0DJ93 91 aa9.19□□□□□ -0.94
ARFGAP1-216ENST00000522959 LINC00158P58513 81 aa9.19□□□□□ -0.94
ARFGAP1-216ENST00000522959 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
ARFGAP1-216ENST00000522959 PCP2Q8IVA1 136 aa9.18□□□□□ -0.94
ARFGAP1-216ENST00000522959 TTTY13Q9BZ97 58 aa9.18□□□□□ -0.94
ARFGAP1-216ENST00000522959 SND1-IT1Q9HBX3 110 aa9.18□□□□□ -0.94
ARFGAP1-216ENST00000522959 VPREB1P12018 145 aa9.17□□□□□ -0.94
ARFGAP1-216ENST00000522959 LOC107984156A0A0G2JMH3 177 aa9.16□□□□□ -0.94
ARFGAP1-216ENST00000522959 SPATA45Q537H7 98 aa9.16□□□□□ -0.94
ARFGAP1-216ENST00000522959 ARL17AQ8IVW1 177 aa9.16□□□□□ -0.94
ARFGAP1-216ENST00000522959 MIR7-3HGQ8N6C7 128 aa9.16□□□□□ -0.94
ARFGAP1-216ENST00000522959 PAM16Q9Y3D7 125 aa9.16□□□□□ -0.94
ARFGAP1-216ENST00000522959 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 TMEM238C9JI98 176 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 DLEU1O43261 78 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 IGKV2D-28P01615 120 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 COX8AP10176 69 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 SCGB1D4Q6XE38 83 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 BOD1L2Q8IYS8 172 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 LITAFQ99732 161 aa9.15□□□□□ -0.94
ARFGAP1-216ENST00000522959 A0A0U1RRA0 63 aa9.14□□□□□ -0.95
ARFGAP1-216ENST00000522959 SMIM6P0DI80 62 aa9.14□□□□□ -0.95
ARFGAP1-216ENST00000522959 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
ARFGAP1-216ENST00000522959 LOC105371267A0A1B0GV96 52 aa9.13□□□□□ -0.95
ARFGAP1-216ENST00000522959 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
ARFGAP1-216ENST00000522959 Q6ZVH6 145 aa9.13□□□□□ -0.95
ARFGAP1-216ENST00000522959 SPANXDQ9BXN6 97 aa9.13□□□□□ -0.95
ARFGAP1-216ENST00000522959 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
ARFGAP1-216ENST00000522959 SPANXCQ9NY87 97 aa9.13□□□□□ -0.95
ARFGAP1-216ENST00000522959 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
ARFGAP1-216ENST00000522959 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
ARFGAP1-216ENST00000522959 RPL13AP40429 203 aaKnown RBP9.11□□□□□ -0.95
ARFGAP1-216ENST00000522959 S100A12P80511 92 aa9.11□□□□□ -0.95
ARFGAP1-216ENST00000522959 RPL24P83731 157 aaKnown RBP9.11□□□□□ -0.95
ARFGAP1-216ENST00000522959 DAND5Q8N907 189 aa9.11□□□□□ -0.95
ARFGAP1-216ENST00000522959 COPS9Q8WXC6 57 aa9.11□□□□□ -0.95
ARFGAP1-216ENST00000522959 MIEN1Q9BRT3 115 aa9.11□□□□□ -0.95
ARFGAP1-216ENST00000522959 M0R378 163 aa9.1□□□□□ -0.95
ARFGAP1-216ENST00000522959 TSPAN13O95857 204 aa9.1□□□□□ -0.95
ARFGAP1-216ENST00000522959 PRLHP81277 87 aa9.1□□□□□ -0.95
ARFGAP1-216ENST00000522959 SPANXB1Q9NS25 103 aaPredicted RBP9.1□□□□□ -0.95
ARFGAP1-216ENST00000522959 NDUFC2O95298 119 aa9.09□□□□□ -0.95
ARFGAP1-216ENST00000522959 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
ARFGAP1-216ENST00000522959 TMEM126AQ9H061 195 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms