RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 TMEM238C9JI98 176 aa12.49□□□□□ -0.41
ARFGEF1-206ENST00000519436 TRGC2P03986 189 aa12.49□□□□□ -0.41
ARFGEF1-206ENST00000519436 TMEM126AQ9H061 195 aa12.49□□□□□ -0.41
ARFGEF1-206ENST00000519436 M0R378 163 aa12.48□□□□□ -0.41
ARFGEF1-206ENST00000519436 HSBP1O75506 76 aa12.48□□□□□ -0.41
ARFGEF1-206ENST00000519436 LINC00158P58513 81 aa12.48□□□□□ -0.41
ARFGEF1-206ENST00000519436 LINC00310P59036 64 aa12.48□□□□□ -0.41
ARFGEF1-206ENST00000519436 PRLHP81277 87 aa12.47□□□□□ -0.41
ARFGEF1-206ENST00000519436 KRTAP13-2Q52LG2 175 aa12.47□□□□□ -0.41
ARFGEF1-206ENST00000519436 TYMSOSQ8TAI1 123 aa12.46□□□□□ -0.41
ARFGEF1-206ENST00000519436 A0A0U1RRA0 63 aa12.45□□□□□ -0.42
ARFGEF1-206ENST00000519436 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
ARFGEF1-206ENST00000519436 FAM229BQ4G0N7 80 aa12.44□□□□□ -0.42
ARFGEF1-206ENST00000519436 FAM19A1Q7Z5A9 133 aa12.44□□□□□ -0.42
ARFGEF1-206ENST00000519436 TSPAN13O95857 204 aa12.43□□□□□ -0.42
ARFGEF1-206ENST00000519436 SERF1AO75920 110 aa12.42□□□□□ -0.42
ARFGEF1-206ENST00000519436 PRR4Q16378 134 aa12.42□□□□□ -0.42
ARFGEF1-206ENST00000519436 SLC7A5P1Q8MH63 180 aa12.42□□□□□ -0.42
ARFGEF1-206ENST00000519436 PLEKHB2Q96CS7 222 aa12.41□□□□□ -0.42
ARFGEF1-206ENST00000519436 LEPROTL1O95214 131 aa12.4□□□□□ -0.42
ARFGEF1-206ENST00000519436 HERV-K104P63124 156 aa12.4□□□□□ -0.42
ARFGEF1-206ENST00000519436 COLCA2A8K830 154 aa12.39□□□□□ -0.43
ARFGEF1-206ENST00000519436 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
ARFGEF1-206ENST00000519436 NDUFA12Q9UI09 145 aa12.39□□□□□ -0.43
ARFGEF1-206ENST00000519436 H0Y8G0 127 aa12.37□□□□□ -0.43
ARFGEF1-206ENST00000519436 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
ARFGEF1-206ENST00000519436 MEIG1Q5JSS6 88 aa12.37□□□□□ -0.43
ARFGEF1-206ENST00000519436 BOD1L2Q8IYS8 172 aa12.37□□□□□ -0.43
ARFGEF1-206ENST00000519436 MYMXA0A1B0GTQ4 84 aa12.35□□□□□ -0.43
ARFGEF1-206ENST00000519436 LINC00587B1AMM8 73 aa12.35□□□□□ -0.43
ARFGEF1-206ENST00000519436 ATP6V1G1O75348 118 aa12.35□□□□□ -0.43
ARFGEF1-206ENST00000519436 LEPROTO15243 131 aa12.34□□□□□ -0.43
ARFGEF1-206ENST00000519436 SPRR1AP35321 89 aa12.34□□□□□ -0.43
ARFGEF1-206ENST00000519436 IGKV2D-26A0A0A0MRZ7 120 aa12.33□□□□□ -0.44
ARFGEF1-206ENST00000519436 KCNQ1DNQ9H478 68 aa12.33□□□□□ -0.44
ARFGEF1-206ENST00000519436 HSPB8Q9UJY1 196 aa12.33□□□□□ -0.44
ARFGEF1-206ENST00000519436 LOC107984156A0A0G2JMH3 177 aa12.32□□□□□ -0.44
ARFGEF1-206ENST00000519436 KRTAP4-16G5E9R7 235 aaPredicted RBP12.32□□□□□ -0.44
ARFGEF1-206ENST00000519436 FABP4P15090 132 aa12.32□□□□□ -0.44
ARFGEF1-206ENST00000519436 PLNP26678 52 aa12.32□□□□□ -0.44
ARFGEF1-206ENST00000519436 ARL17AQ8IVW1 177 aa12.32□□□□□ -0.44
ARFGEF1-206ENST00000519436 LINC00304Q8N9R0 145 aa12.32□□□□□ -0.44
ARFGEF1-206ENST00000519436 HIGD2AQ9BW72 106 aa12.32□□□□□ -0.44
ARFGEF1-206ENST00000519436 PRYO14603 147 aa12.31□□□□□ -0.44
ARFGEF1-206ENST00000519436 NCR3O14931 201 aa12.3□□□□□ -0.44
ARFGEF1-206ENST00000519436 DPM2O94777 84 aa12.3□□□□□ -0.44
ARFGEF1-206ENST00000519436 LINC00337Q8N6G1 96 aa12.3□□□□□ -0.44
ARFGEF1-206ENST00000519436 SPRR4Q96PI1 79 aa12.3□□□□□ -0.44
ARFGEF1-206ENST00000519436 PMCHL2Q9BQD1 86 aa12.3□□□□□ -0.44
ARFGEF1-206ENST00000519436 MAP1LC3CQ9BXW4 147 aa12.3□□□□□ -0.44
ARFGEF1-206ENST00000519436 J3QQQ9 107 aa12.29□□□□□ -0.44
ARFGEF1-206ENST00000519436 C3orf22Q8N5N4 141 aa12.29□□□□□ -0.44
ARFGEF1-206ENST00000519436 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
ARFGEF1-206ENST00000519436 IGKCP01834 107 aa12.27□□□□□ -0.45
ARFGEF1-206ENST00000519436 CTAG1AP78358 180 aa12.27□□□□□ -0.45
ARFGEF1-206ENST00000519436 DAND5Q8N907 189 aa12.27□□□□□ -0.45
ARFGEF1-206ENST00000519436 MUC2Q02817 5179 aa12.25□□□□□ -0.45
ARFGEF1-206ENST00000519436 NMUP48645 174 aa12.25□□□□□ -0.45
ARFGEF1-206ENST00000519436 HERVK_113P61574 105 aa12.24□□□□□ -0.45
ARFGEF1-206ENST00000519436 SMCR5Q8TEV8 140 aa12.24□□□□□ -0.45
ARFGEF1-206ENST00000519436 TRBV10-2A0A0K0K1G8 114 aa12.23□□□□□ -0.45
ARFGEF1-206ENST00000519436 RETNLBQ9BQ08 111 aa12.23□□□□□ -0.45
ARFGEF1-206ENST00000519436 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.45
ARFGEF1-206ENST00000519436 ZNF706Q9Y5V0 76 aaPredicted RBP12.21□□□□□ -0.45
ARFGEF1-206ENST00000519436 ETDCA0A1B0GVM5 59 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 B5MCH6 92 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BKO60814 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BJP06899 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BOP23527 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BBP33778 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BDP58876 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BCP62807 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST2H2BEQ16778 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BHQ93079 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BNQ99877 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 HIST1H2BMQ99879 126 aa12.2□□□□□ -0.46
ARFGEF1-206ENST00000519436 E9PLD3 99 aa12.19□□□□□ -0.46
ARFGEF1-206ENST00000519436 EIF4EBP3O60516 100 aaPredicted RBP12.19□□□□□ -0.46
ARFGEF1-206ENST00000519436 NDUFC2O95298 119 aa12.18□□□□□ -0.46
ARFGEF1-206ENST00000519436 DDTP30046 118 aa12.18□□□□□ -0.46
ARFGEF1-206ENST00000519436 ADAMTSL4-AS1Q5T5F5 129 aa12.18□□□□□ -0.46
ARFGEF1-206ENST00000519436 SOSTDC1Q6X4U4 206 aa12.18□□□□□ -0.46
ARFGEF1-206ENST00000519436 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
ARFGEF1-206ENST00000519436 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
ARFGEF1-206ENST00000519436 IGLV6-57P01721 117 aa12.17□□□□□ -0.46
ARFGEF1-206ENST00000519436 LINC00483Q53H64 154 aa12.17□□□□□ -0.46
ARFGEF1-206ENST00000519436 SPAG11AQ6PDA7 123 aa12.17□□□□□ -0.46
ARFGEF1-206ENST00000519436 SPANXB1Q9NS25 103 aaPredicted RBP12.17□□□□□ -0.46
ARFGEF1-206ENST00000519436 ERC2-IT1O76042 136 aa12.16□□□□□ -0.46
ARFGEF1-206ENST00000519436 MUC17Q685J3 4493 aa12.15□□□□□ -0.46
ARFGEF1-206ENST00000519436 S100A12P80511 92 aa12.15□□□□□ -0.46
ARFGEF1-206ENST00000519436 PPDPFQ9H3Y8 114 aa12.15□□□□□ -0.46
ARFGEF1-206ENST00000519436 IGLV7-46A0A075B6I9 117 aa12.14□□□□□ -0.47
ARFGEF1-206ENST00000519436 Q9BRP9 147 aa12.14□□□□□ -0.47
ARFGEF1-206ENST00000519436 MIEN1Q9BRT3 115 aa12.14□□□□□ -0.47
ARFGEF1-206ENST00000519436 TPRXLQ17RH7 258 aa12.13□□□□□ -0.47
ARFGEF1-206ENST00000519436 LINC01545Q5VT33 79 aa12.13□□□□□ -0.47
ARFGEF1-206ENST00000519436 Q6ZRX8 168 aa12.11□□□□□ -0.47
ARFGEF1-206ENST00000519436 Q8NBF4 154 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms