RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 UBE2BP63146 152 aa14.03□□□□□ -0.16
SKP1-206ENST00000519321 IGLV5-37A0A075B6J1 123 aa14.02□□□□□ -0.17
SKP1-206ENST00000519321 A0A0U1RRA0 63 aa14.02□□□□□ -0.17
SKP1-206ENST00000519321 RPL24P83731 157 aaKnown RBP14.02□□□□□ -0.17
SKP1-206ENST00000519321 VPS13BQ7Z7G8 4022 aa14.02□□□□□ -0.17
SKP1-206ENST00000519321 SRRM2Q9UQ35 2752 aaKnown RBP14.01□□□□□ -0.17
SKP1-206ENST00000519321 MRPL55Q7Z7F7 128 aaKnown RBP14.01□□□□□ -0.17
SKP1-206ENST00000519321 NKAPP1Q8N9T2 125 aa14.01□□□□□ -0.17
SKP1-206ENST00000519321 PSORS1C2Q9UIG4 136 aa14□□□□□ -0.17
SKP1-206ENST00000519321 MIR7-3HGQ8N6C7 128 aa13.99□□□□□ -0.17
SKP1-206ENST00000519321 ABCA13Q86UQ4 5058 aa13.97□□□□□ -0.17
SKP1-206ENST00000519321 C1orf137Q5JT78 98 aa13.96□□□□□ -0.17
SKP1-206ENST00000519321 ATOH7Q8N100 152 aa13.96□□□□□ -0.17
SKP1-206ENST00000519321 A0A0J9YXY3 114 aa13.95□□□□□ -0.18
SKP1-206ENST00000519321 VPREB1P12018 145 aa13.95□□□□□ -0.18
SKP1-206ENST00000519321 HNRNPA3P51991 378 aaKnown RBP13.95□□□□□ -0.18
SKP1-206ENST00000519321 LINC00167Q96N53 147 aa13.94□□□□□ -0.18
SKP1-206ENST00000519321 IGKV2D-26A0A0A0MRZ7 120 aa13.93□□□□□ -0.18
SKP1-206ENST00000519321 ZNF815PA8K554 130 aa13.93□□□□□ -0.18
SKP1-206ENST00000519321 KRTAP11-1Q8IUC1 163 aa13.92□□□□□ -0.18
SKP1-206ENST00000519321 HSBP1L1C9JCN9 74 aa13.91□□□□□ -0.18
SKP1-206ENST00000519321 ANKRD39Q53RE8 183 aa13.91□□□□□ -0.18
SKP1-206ENST00000519321 SPINK6Q6UWN8 80 aa13.91□□□□□ -0.18
SKP1-206ENST00000519321 BOD1L2Q8IYS8 172 aa13.91□□□□□ -0.18
SKP1-206ENST00000519321 LOC107984156A0A0G2JMH3 177 aa13.9□□□□□ -0.18
SKP1-206ENST00000519321 ARL17AQ8IVW1 177 aa13.9□□□□□ -0.18
SKP1-206ENST00000519321 MIEN1Q9BRT3 115 aa13.9□□□□□ -0.18
SKP1-206ENST00000519321 GAGE10A6NGK3 116 aa13.89□□□□□ -0.19
SKP1-206ENST00000519321 TIMM17BO60830 172 aa13.89□□□□□ -0.19
SKP1-206ENST00000519321 SCGB1D1O95968 90 aa13.89□□□□□ -0.19
SKP1-206ENST00000519321 IGLV7-43P04211 117 aa13.89□□□□□ -0.19
SKP1-206ENST00000519321 RPL37AP8A6NKH3 93 aa13.88□□□□□ -0.19
SKP1-206ENST00000519321 SRSF9Q13242 221 aaKnown RBP eCLIP13.88□□□□□ -0.19
SKP1-206ENST00000519321 DAND5Q8N907 189 aa13.88□□□□□ -0.19
SKP1-206ENST00000519321 PCLOQ9Y6V0 5065 aa13.86□□□□□ -0.19
SKP1-206ENST00000519321 FLG2Q5D862 2391 aaPredicted RBP13.86□□□□□ -0.19
SKP1-206ENST00000519321 M0R378 163 aa13.86□□□□□ -0.19
SKP1-206ENST00000519321 Q8NDZ9 215 aa13.86□□□□□ -0.19
SKP1-206ENST00000519321 TTTY13Q9BZ97 58 aa13.86□□□□□ -0.19
SKP1-206ENST00000519321 OXTP01178 125 aa13.85□□□□□ -0.19
SKP1-206ENST00000519321 SCGB1D4Q6XE38 83 aa13.85□□□□□ -0.19
SKP1-206ENST00000519321 IGLV1-50A0A075B6I6 118 aa13.84□□□□□ -0.19
SKP1-206ENST00000519321 KRTAP29-1A8MX34 341 aaPredicted RBP13.84□□□□□ -0.19
SKP1-206ENST00000519321 ADAMTSL4-AS1Q5T5F5 129 aa13.84□□□□□ -0.19
SKP1-206ENST00000519321 IGKV2-28A0A075B6P5 120 aa13.83□□□□□ -0.2
SKP1-206ENST00000519321 IGKV2D-28P01615 120 aa13.83□□□□□ -0.2
SKP1-206ENST00000519321 BCE1O60756 84 aa13.82□□□□□ -0.2
SKP1-206ENST00000519321 LITAFQ99732 161 aa13.82□□□□□ -0.2
SKP1-206ENST00000519321 NDUFC2O95298 119 aa13.81□□□□□ -0.2
SKP1-206ENST00000519321 REG3GQ6UW15 175 aa13.81□□□□□ -0.2
SKP1-206ENST00000519321 DIRC1Q969H9 104 aa13.81□□□□□ -0.2
SKP1-206ENST00000519321 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
SKP1-206ENST00000519321 PCP2Q8IVA1 136 aa13.8□□□□□ -0.2
SKP1-206ENST00000519321 TRBV10-2A0A0K0K1G8 114 aa13.79□□□□□ -0.2
SKP1-206ENST00000519321 NCR3O14931 201 aa13.79□□□□□ -0.2
SKP1-206ENST00000519321 TMA7Q9Y2S6 64 aaKnown RBP13.79□□□□□ -0.2
SKP1-206ENST00000519321 J3QL48 77 aa13.78□□□□□ -0.2
SKP1-206ENST00000519321 ZNF861PO60384 105 aa13.78□□□□□ -0.2
SKP1-206ENST00000519321 NPC2P61916 151 aa13.78□□□□□ -0.2
SKP1-206ENST00000519321 LINC00308Q8TCZ7 52 aa13.78□□□□□ -0.2
SKP1-206ENST00000519321 SPANXB1Q9NS25 103 aaPredicted RBP13.78□□□□□ -0.2
SKP1-206ENST00000519321 RPL28P46779 137 aaKnown RBP13.77□□□□□ -0.21
SKP1-206ENST00000519321 S100A12P80511 92 aa13.77□□□□□ -0.21
SKP1-206ENST00000519321 SOSTDC1Q6X4U4 206 aa13.77□□□□□ -0.21
SKP1-206ENST00000519321 COPS9Q8WXC6 57 aa13.77□□□□□ -0.21
SKP1-206ENST00000519321 PKHD1L1Q86WI1 4243 aa13.76□□□□□ -0.21
SKP1-206ENST00000519321 Q6ZVH6 145 aa13.76□□□□□ -0.21
SKP1-206ENST00000519321 SPANXDQ9BXN6 97 aa13.76□□□□□ -0.21
SKP1-206ENST00000519321 TMEM126AQ9H061 195 aa13.76□□□□□ -0.21
SKP1-206ENST00000519321 SPANXCQ9NY87 97 aa13.76□□□□□ -0.21
SKP1-206ENST00000519321 JOSD1Q15040 202 aaPredicted RBP13.75□□□□□ -0.21
SKP1-206ENST00000519321 H0Y9J4 135 aa13.74□□□□□ -0.21
SKP1-206ENST00000519321 MYCBP2O75592 4640 aa13.73□□□□□ -0.21
SKP1-206ENST00000519321 PRYO14603 147 aa13.73□□□□□ -0.21
SKP1-206ENST00000519321 UBE2AP49459 152 aa13.73□□□□□ -0.21
SKP1-206ENST00000519321 TRBV10-3A0A0K0K1G6 114 aa13.72□□□□□ -0.21
SKP1-206ENST00000519321 IFITM1P13164 125 aa13.72□□□□□ -0.21
SKP1-206ENST00000519321 PPDPFQ9H3Y8 114 aa13.72□□□□□ -0.21
SKP1-206ENST00000519321 EIF4EBP3O60516 100 aaPredicted RBP13.71□□□□□ -0.21
SKP1-206ENST00000519321 DDTP30046 118 aa13.71□□□□□ -0.21
SKP1-206ENST00000519321 S100A7L2Q5SY68 101 aa13.71□□□□□ -0.21
SKP1-206ENST00000519321 KCNQ1DNQ9H478 68 aa13.71□□□□□ -0.21
SKP1-206ENST00000519321 FAM19A1Q7Z5A9 133 aa13.7□□□□□ -0.22
SKP1-206ENST00000519321 LINC01600Q96MT4 127 aa13.7□□□□□ -0.22
SKP1-206ENST00000519321 CBY1Q9Y3M2 126 aa13.69□□□□□ -0.22
SKP1-206ENST00000519321 KRTAP13-1Q8IUC0 172 aa13.68□□□□□ -0.22
SKP1-206ENST00000519321 LINC00518Q8N0U6 118 aa13.68□□□□□ -0.22
SKP1-206ENST00000519321 VAMP8Q9BV40 100 aa13.68□□□□□ -0.22
SKP1-206ENST00000519321 IGLV6-57P01721 117 aa13.66□□□□□ -0.22
SKP1-206ENST00000519321 COX8AP10176 69 aa13.66□□□□□ -0.22
SKP1-206ENST00000519321 LINC00337Q8N6G1 96 aa13.66□□□□□ -0.22
SKP1-206ENST00000519321 SPRR1AP35321 89 aa13.65□□□□□ -0.22
SKP1-206ENST00000519321 SPATA45Q537H7 98 aa13.65□□□□□ -0.22
SKP1-206ENST00000519321 PAM16Q9Y3D7 125 aa13.65□□□□□ -0.22
SKP1-206ENST00000519321 LRP1Q07954 4544 aaKnown RBP13.64□□□□□ -0.23
SKP1-206ENST00000519321 DLEU1O43261 78 aa13.64□□□□□ -0.23
SKP1-206ENST00000519321 PRLHP81277 87 aa13.64□□□□□ -0.23
SKP1-206ENST00000519321 DMBT1Q9UGM3 2413 aaPredicted RBP13.63□□□□□ -0.23
SKP1-206ENST00000519321 MUSTN1Q8IVN3 82 aa13.63□□□□□ -0.23
SKP1-206ENST00000519321 FAT3Q8TDW7 4589 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 434.6 ms