RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ESM1Q9NQ30 184 aa9.05□□□□□ -0.96
PABPC1-208ENST00000519004 NOTCH3Q9UM47 2321 aa9.04□□□□□ -0.96
PABPC1-208ENST00000519004 LYRM9A8MSI8 78 aa9.04□□□□□ -0.96
PABPC1-208ENST00000519004 C16orf90A8MZG2 172 aa9.04□□□□□ -0.96
PABPC1-208ENST00000519004 UNQ6190/PRO20217Q6UXQ8 127 aa9.04□□□□□ -0.96
PABPC1-208ENST00000519004 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
PABPC1-208ENST00000519004 NBPF19A0A087WUL8 3843 aa9.04□□□□□ -0.96
PABPC1-208ENST00000519004 M0R378 163 aa9.04□□□□□ -0.96
PABPC1-208ENST00000519004 HIGD2BQ4VC39 106 aa9.04□□□□□ -0.96
PABPC1-208ENST00000519004 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.03□□□□□ -0.96
PABPC1-208ENST00000519004 GIG44P09565 113 aaPredicted RBP9.03□□□□□ -0.96
PABPC1-208ENST00000519004 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
PABPC1-208ENST00000519004 ZNF702PQ9H963 129 aa9.03□□□□□ -0.96
PABPC1-208ENST00000519004 MSMBP08118 114 aa9.02□□□□□ -0.97
PABPC1-208ENST00000519004 UBE2AP49459 152 aa9.02□□□□□ -0.97
PABPC1-208ENST00000519004 IGLV10-54A0A075B6I4 117 aa9.02□□□□□ -0.97
PABPC1-208ENST00000519004 ETDCA0A1B0GVM5 59 aa9.01□□□□□ -0.97
PABPC1-208ENST00000519004 PRB2P02812 416 aaPredicted RBP9.01□□□□□ -0.97
PABPC1-208ENST00000519004 ST20-AS1Q8NBB2 130 aa9□□□□□ -0.97
PABPC1-208ENST00000519004 A0A0J9YWU9 116 aa9□□□□□ -0.97
PABPC1-208ENST00000519004 CHKB-CPT1BH3BT56 60 aa8.99□□□□□ -0.97
PABPC1-208ENST00000519004 CSNK1G2-AS1Q8NCQ2 148 aa8.99□□□□□ -0.97
PABPC1-208ENST00000519004 SPAG11BQ08648 103 aa8.98□□□□□ -0.97
PABPC1-208ENST00000519004 NBASA2RRP1 2371 aa8.98□□□□□ -0.97
PABPC1-208ENST00000519004 GYPEP15421 78 aa8.97□□□□□ -0.97
PABPC1-208ENST00000519004 AKAP9Q99996 3911 aa8.97□□□□□ -0.97
PABPC1-208ENST00000519004 CYSRT1A8MQ03 144 aa8.97□□□□□ -0.97
PABPC1-208ENST00000519004 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
PABPC1-208ENST00000519004 A6NN06 94 aa8.96□□□□□ -0.97
PABPC1-208ENST00000519004 Q8N9P0 234 aaPredicted RBP8.96□□□□□ -0.97
PABPC1-208ENST00000519004 XAGE1AQ9HD64 81 aa8.96□□□□□ -0.97
PABPC1-208ENST00000519004 SPTSSBQ8NFR3 76 aa8.96□□□□□ -0.98
PABPC1-208ENST00000519004 C4orf3Q8WVX3 66 aa8.96□□□□□ -0.98
PABPC1-208ENST00000519004 CSPG4Q6UVK1 2322 aa8.96□□□□□ -0.98
PABPC1-208ENST00000519004 CUBNO60494 3623 aa8.96□□□□□ -0.98
PABPC1-208ENST00000519004 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
PABPC1-208ENST00000519004 NDUFS5O43920 106 aa8.95□□□□□ -0.98
PABPC1-208ENST00000519004 LCA10Q71F78 164 aa8.95□□□□□ -0.98
PABPC1-208ENST00000519004 BDP1A6H8Y1 2624 aa8.95□□□□□ -0.98
PABPC1-208ENST00000519004 A0A096LPF7 62 aa8.95□□□□□ -0.98
PABPC1-208ENST00000519004 REG3AQ06141 175 aa8.95□□□□□ -0.98
PABPC1-208ENST00000519004 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
PABPC1-208ENST00000519004 PHF5AQ7RTV0 110 aaKnown RBP8.94□□□□□ -0.98
PABPC1-208ENST00000519004 B9D2Q9BPU9 175 aa8.93□□□□□ -0.98
PABPC1-208ENST00000519004 LIMD2Q9BT23 127 aa8.93□□□□□ -0.98
PABPC1-208ENST00000519004 ANGP03950 147 aaKnown RBP8.93□□□□□ -0.98
PABPC1-208ENST00000519004 C11orf45Q8TAV5 145 aa8.93□□□□□ -0.98
PABPC1-208ENST00000519004 PRR15LQ9BU68 103 aa8.93□□□□□ -0.98
PABPC1-208ENST00000519004 B4DSR2 109 aa8.92□□□□□ -0.98
PABPC1-208ENST00000519004 NDUFB1O75438 58 aa8.92□□□□□ -0.98
PABPC1-208ENST00000519004 DSCR10P59022 87 aa8.92□□□□□ -0.98
PABPC1-208ENST00000519004 C4orf48Q5BLP8 95 aa8.92□□□□□ -0.98
PABPC1-208ENST00000519004 IGLV5-48A0A075B6I7 105 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 GVQW2A0A096LPI5 108 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-208ENST00000519004 DEFB130BP0DP73 79 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 DEFB130AP0DP74 79 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 VPREB1P12018 145 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 KPRPQ5T749 579 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-208ENST00000519004 WFDC10AQ9H1F0 79 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 A0A1W2PNM2 257 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 K7EQZ3 153 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 APOC4P55056 127 aa8.91□□□□□ -0.98
PABPC1-208ENST00000519004 CHD6Q8TD26 2715 aa8.9□□□□□ -0.98
PABPC1-208ENST00000519004 ITPR1Q14643 2758 aa8.89□□□□□ -0.99
PABPC1-208ENST00000519004 Q75L30 129 aa8.89□□□□□ -0.99
PABPC1-208ENST00000519004 Q8N377 158 aa8.89□□□□□ -0.99
PABPC1-208ENST00000519004 A0A1B0GW54 56 aa8.88□□□□□ -0.99
PABPC1-208ENST00000519004 LINC00208Q96KT6 92 aa8.88□□□□□ -0.99
PABPC1-208ENST00000519004 Q6YL49 198 aa8.86□□□□□ -0.99
PABPC1-208ENST00000519004 DSCR9P59020 149 aa8.86□□□□□ -0.99
PABPC1-208ENST00000519004 DEFB105AQ8NG35 78 aa8.86□□□□□ -0.99
PABPC1-208ENST00000519004 Q9BRP9 147 aa8.86□□□□□ -0.99
PABPC1-208ENST00000519004 CCL19Q99731 98 aa8.85□□□□□ -0.99
PABPC1-208ENST00000519004 KCNQ1DNQ9H478 68 aa8.85□□□□□ -0.99
PABPC1-208ENST00000519004 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
PABPC1-208ENST00000519004 A6NED7 52 aa8.84□□□□□ -0.99
PABPC1-208ENST00000519004 PRO0255Q9UI72 69 aa8.84□□□□□ -0.99
PABPC1-208ENST00000519004 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
PABPC1-208ENST00000519004 SPANXA2-OT1Q8N9U9 137 aa8.84□□□□□ -0.99
PABPC1-208ENST00000519004 SPG11Q96JI7 2443 aa8.83□□□□□ -1
PABPC1-208ENST00000519004 CELSR2Q9HCU4 2923 aa8.83□□□□□ -1
PABPC1-208ENST00000519004 ZNF292O60281 2723 aa8.83□□□□□ -1
PABPC1-208ENST00000519004 DEFB123Q8N688 67 aa8.83□□□□□ -1
PABPC1-208ENST00000519004 Q8NBF4 154 aa8.83□□□□□ -1
PABPC1-208ENST00000519004 C19orf73Q9NVV2 129 aa8.83□□□□□ -1
PABPC1-208ENST00000519004 CDC42SE1Q9NRR8 79 aa8.82□□□□□ -1
PABPC1-208ENST00000519004 HIVEP3Q5T1R4 2406 aa8.82□□□□□ -1
PABPC1-208ENST00000519004 MP68P56378 58 aa8.82□□□□□ -1
PABPC1-208ENST00000519004 TNP2Q05952 138 aa8.82□□□□□ -1
PABPC1-208ENST00000519004 ATRXP46100 2492 aa8.82□□□□□ -1
PABPC1-208ENST00000519004 C8orf87E5RJ46 101 aa8.81□□□□□ -1
PABPC1-208ENST00000519004 SPRR4Q96PI1 79 aa8.81□□□□□ -1
PABPC1-208ENST00000519004 C1orf137Q5JT78 98 aa8.81□□□□□ -1
PABPC1-208ENST00000519004 SETXQ7Z333 2677 aaKnown RBP8.79□□□□□ -1
PABPC1-208ENST00000519004 MOBPQ13875 183 aa8.79□□□□□ -1
PABPC1-208ENST00000519004 JMJD1CQ15652 2540 aa8.78□□□□□ -1
PABPC1-208ENST00000519004 CMC4P56277 68 aaPredicted RBP8.78□□□□□ -1
PABPC1-208ENST00000519004 DEFB116Q30KQ4 102 aa8.78□□□□□ -1
PABPC1-208ENST00000519004 FSHBP01225 129 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms