RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 KLK9Q9UKQ9 250 aa3.25□□□□□ -1.89
SQLE-203ENST00000518931 IGKV1-17P01599 117 aa3.24□□□□□ -1.89
SQLE-203ENST00000518931 KIAA0100Q14667 2235 aaKnown RBP3.24□□□□□ -1.89
SQLE-203ENST00000518931 RP1P56715 2156 aa3.23□□□□□ -1.89
SQLE-203ENST00000518931 TPRXLQ17RH7 258 aa3.23□□□□□ -1.89
SQLE-203ENST00000518931 FREM1Q5H8C1 2179 aa3.23□□□□□ -1.89
SQLE-203ENST00000518931 SMIM11BQ8TCY0 68 aa3.23□□□□□ -1.89
SQLE-203ENST00000518931 RPL39LQ96EH5 51 aaKnown RBP3.23□□□□□ -1.89
SQLE-203ENST00000518931 ARFGEF3Q5TH69 2177 aa3.22□□□□□ -1.89
SQLE-203ENST00000518931 IGKV4-1P06312 121 aa3.22□□□□□ -1.89
SQLE-203ENST00000518931 CCL18P55774 89 aa3.22□□□□□ -1.89
SQLE-203ENST00000518931 RPL39P62891 51 aaKnown RBP3.22□□□□□ -1.89
SQLE-203ENST00000518931 C10orf55Q5SWW7 151 aa3.22□□□□□ -1.89
SQLE-203ENST00000518931 DEFB132Q7Z7B7 95 aa3.22□□□□□ -1.89
SQLE-203ENST00000518931 TMEM167AQ8TBQ9 72 aa3.22□□□□□ -1.89
SQLE-203ENST00000518931 CACNA1DQ01668 2161 aa3.22□□□□□ -1.89
SQLE-203ENST00000518931 IGKV3OR2-268A0A0C4DH90 116 aa3.21□□□□□ -1.9
SQLE-203ENST00000518931 A0A1W2PNN7 141 aa3.21□□□□□ -1.9
SQLE-203ENST00000518931 H0YGG7 62 aa3.21□□□□□ -1.9
SQLE-203ENST00000518931 WFDC10AQ9H1F0 79 aa3.21□□□□□ -1.9
SQLE-203ENST00000518931 IGKV2-40A0A087WW87 121 aaPredicted RBP3.2□□□□□ -1.9
SQLE-203ENST00000518931 ETDCA0A1B0GVM5 59 aa3.2□□□□□ -1.9
SQLE-203ENST00000518931 NDUFA4O00483 81 aa3.2□□□□□ -1.9
SQLE-203ENST00000518931 UQCR11O14957 56 aa3.2□□□□□ -1.9
SQLE-203ENST00000518931 IGKV2D-40P01614 121 aaPredicted RBP3.2□□□□□ -1.9
SQLE-203ENST00000518931 IGLV6-57P01721 117 aa3.2□□□□□ -1.9
SQLE-203ENST00000518931 SPACA4Q8TDM5 124 aa3.2□□□□□ -1.9
SQLE-203ENST00000518931 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.19□□□□□ -1.9
SQLE-203ENST00000518931 MGPP08493 103 aa3.19□□□□□ -1.9
SQLE-203ENST00000518931 LINC00315P59091 139 aa3.19□□□□□ -1.9
SQLE-203ENST00000518931 WT1-ASQ06250 92 aa3.19□□□□□ -1.9
SQLE-203ENST00000518931 RPL39P5Q59GN2 51 aa3.19□□□□□ -1.9
SQLE-203ENST00000518931 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
SQLE-203ENST00000518931 IGKV2-28A0A075B6P5 120 aa3.18□□□□□ -1.9
SQLE-203ENST00000518931 TRGV2A0A075B6R0 118 aa3.18□□□□□ -1.9
SQLE-203ENST00000518931 IGKV2D-28P01615 120 aa3.18□□□□□ -1.9
SQLE-203ENST00000518931 SPINK7P58062 85 aa3.18□□□□□ -1.9
SQLE-203ENST00000518931 TTTY12Q9BZ98 90 aa3.18□□□□□ -1.9
SQLE-203ENST00000518931 KCNQ1DNQ9H478 68 aa3.18□□□□□ -1.9
SQLE-203ENST00000518931 DEFB108AA8MXU0 73 aa3.17□□□□□ -1.9
SQLE-203ENST00000518931 RPL37AP61513 92 aaKnown RBP3.17□□□□□ -1.9
SQLE-203ENST00000518931 GAFA1Q96PS6 74 aa3.17□□□□□ -1.9
SQLE-203ENST00000518931 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
SQLE-203ENST00000518931 CUL9Q8IWT3 2517 aa3.17□□□□□ -1.9
SQLE-203ENST00000518931 H0Y9P7 68 aa3.16□□□□□ -1.9
SQLE-203ENST00000518931 RNASE3P12724 160 aaKnown RBP3.16□□□□□ -1.9
SQLE-203ENST00000518931 SPATA8Q6RVD6 105 aa3.16□□□□□ -1.9
SQLE-203ENST00000518931 LEAP2Q969E1 77 aa3.16□□□□□ -1.9
SQLE-203ENST00000518931 COA5Q86WW8 74 aa3.15□□□□□ -1.91
SQLE-203ENST00000518931 KNTC1P50748 2209 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 SPAG17Q6Q759 2223 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 UNC13CQ8NB66 2214 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 NBDYA0A0U1RRE5 68 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 I3L2K1 104 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 M0R2N4 97 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 COX7BP24311 80 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
SQLE-203ENST00000518931 ALPK2Q86TB3 2170 aa3.14□□□□□ -1.91
SQLE-203ENST00000518931 TRGV4A0A0C4DH28 118 aa3.13□□□□□ -1.91
SQLE-203ENST00000518931 INE1O15225 51 aa3.13□□□□□ -1.91
SQLE-203ENST00000518931 COX17Q14061 63 aa3.13□□□□□ -1.91
SQLE-203ENST00000518931 LINC00575Q6W349 94 aa3.13□□□□□ -1.91
SQLE-203ENST00000518931 CDKN2A-AS1Q9UH64 79 aa3.13□□□□□ -1.91
SQLE-203ENST00000518931 SEC16AO15027 2179 aa3.12□□□□□ -1.91
SQLE-203ENST00000518931 LINC00959A0A1B0GUT2 108 aa3.12□□□□□ -1.91
SQLE-203ENST00000518931 M0QY20 66 aa3.12□□□□□ -1.91
SQLE-203ENST00000518931 DEFB112Q30KQ8 113 aa3.12□□□□□ -1.91
SQLE-203ENST00000518931 C5orf56Q8N8D9 126 aa3.12□□□□□ -1.91
SQLE-203ENST00000518931 SPRR4Q96PI1 79 aa3.12□□□□□ -1.91
SQLE-203ENST00000518931 A0A096LNT2 108 aa3.11□□□□□ -1.91
SQLE-203ENST00000518931 IGKV2-24A0A0C4DH68 120 aa3.11□□□□□ -1.91
SQLE-203ENST00000518931 LINC00158P58513 81 aa3.11□□□□□ -1.91
SQLE-203ENST00000518931 DOCK10Q96BY6 2186 aa3.1□□□□□ -1.91
SQLE-203ENST00000518931 DNAJC13O75165 2243 aa3.1□□□□□ -1.91
SQLE-203ENST00000518931 USF3Q68DE3 2245 aa3.09□□□□□ -1.91
SQLE-203ENST00000518931 A0A087WTM6 91 aa3.09□□□□□ -1.91
SQLE-203ENST00000518931 K7EIM0 57 aa3.09□□□□□ -1.91
SQLE-203ENST00000518931 PRR9Q5T870 116 aa3.09□□□□□ -1.91
SQLE-203ENST00000518931 ZFHX3Q15911 3703 aa3.08□□□□□ -1.92
SQLE-203ENST00000518931 KRTAP13-2Q52LG2 175 aa3.08□□□□□ -1.92
SQLE-203ENST00000518931 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.08□□□□□ -1.92
SQLE-203ENST00000518931 CEP350Q5VT06 3117 aa3.08□□□□□ -1.92
SQLE-203ENST00000518931 PRB1P04280 392 aa3.07□□□□□ -1.92
SQLE-203ENST00000518931 COX6A2Q02221 97 aa3.07□□□□□ -1.92
SQLE-203ENST00000518931 TNCP24821 2201 aa3.07□□□□□ -1.92
SQLE-203ENST00000518931 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
SQLE-203ENST00000518931 LINC00304Q8N9R0 145 aa3.06□□□□□ -1.92
SQLE-203ENST00000518931 ZFHX2Q9C0A1 2572 aaPredicted RBP3.06□□□□□ -1.92
SQLE-203ENST00000518931 PRB3Q04118 309 aaPredicted RBP3.05□□□□□ -1.92
SQLE-203ENST00000518931 Q6ZQY7 126 aa3.05□□□□□ -1.92
SQLE-203ENST00000518931 BRWD1Q9NSI6 2320 aa3.05□□□□□ -1.92
SQLE-203ENST00000518931 DEFB131BA0A096LNP1 70 aa3.03□□□□□ -1.92
SQLE-203ENST00000518931 TRGV1A0A0A0MS02 117 aa3.03□□□□□ -1.92
SQLE-203ENST00000518931 Q96NJ1 140 aa3.03□□□□□ -1.92
SQLE-203ENST00000518931 PRRC2BQ5JSZ5 2229 aaKnown RBP3.03□□□□□ -1.93
SQLE-203ENST00000518931 MRPL33O75394 65 aaKnown RBP3.02□□□□□ -1.93
SQLE-203ENST00000518931 KLK9Q2XQG4 91 aa3.02□□□□□ -1.93
SQLE-203ENST00000518931 DEFB110Q30KQ9 67 aa3.02□□□□□ -1.93
SQLE-203ENST00000518931 Q8IZM0 81 aa3.02□□□□□ -1.93
SQLE-203ENST00000518931 DEFB104AQ8WTQ1 72 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms