RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 TRBV10-3A0A0K0K1G6 114 aa12.58□□□□□ -0.4
SDC2-202ENST00000518385 DEFB4AO15263 64 aa12.58□□□□□ -0.4
SDC2-202ENST00000518385 C6orf226Q5I0X4 101 aa12.58□□□□□ -0.4
SDC2-202ENST00000518385 TMEM256-PLSCR3K7ERE1 68 aa12.57□□□□□ -0.4
SDC2-202ENST00000518385 TMEM258P61165 79 aa12.57□□□□□ -0.4
SDC2-202ENST00000518385 C14orf132Q9NPU4 83 aa12.57□□□□□ -0.4
SDC2-202ENST00000518385 CELA1Q9UNI1 258 aa12.57□□□□□ -0.4
SDC2-202ENST00000518385 NBEAL2Q6ZNJ1 2754 aa12.57□□□□□ -0.4
SDC2-202ENST00000518385 NBEAL1Q6ZS30 2694 aa12.56□□□□□ -0.4
SDC2-202ENST00000518385 IGLV4-60A0A075B6I1 120 aa12.56□□□□□ -0.4
SDC2-202ENST00000518385 BCE1O60756 84 aa12.56□□□□□ -0.4
SDC2-202ENST00000518385 OR13C6PQ8NH95 151 aa12.56□□□□□ -0.4
SDC2-202ENST00000518385 C11orf68Q9H3H3 251 aaKnown RBP12.55□□□□□ -0.4
SDC2-202ENST00000518385 RETNQ9HD89 108 aa12.55□□□□□ -0.4
SDC2-202ENST00000518385 LINC00846Q9NV44 126 aa12.54□□□□□ -0.4
SDC2-202ENST00000518385 hADV29S1A0JD25 119 aa12.52□□□□□ -0.4
SDC2-202ENST00000518385 H3BNG1 76 aa12.52□□□□□ -0.4
SDC2-202ENST00000518385 CFAP161Q6P656 301 aa12.52□□□□□ -0.4
SDC2-202ENST00000518385 NDUFC2-KCTD14E9PQ53 114 aa12.52□□□□□ -0.41
SDC2-202ENST00000518385 PFN2P35080 140 aa12.52□□□□□ -0.41
SDC2-202ENST00000518385 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.41
SDC2-202ENST00000518385 Q8N814 137 aa12.5□□□□□ -0.41
SDC2-202ENST00000518385 TM2D3Q9BRN9 247 aa12.5□□□□□ -0.41
SDC2-202ENST00000518385 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
SDC2-202ENST00000518385 LELP1Q5T871 98 aa12.48□□□□□ -0.41
SDC2-202ENST00000518385 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
SDC2-202ENST00000518385 IGKV3OR2-268A0A0C4DH90 116 aa12.47□□□□□ -0.41
SDC2-202ENST00000518385 NCR3O14931 201 aa12.47□□□□□ -0.41
SDC2-202ENST00000518385 CD164L2Q6UWJ8 174 aa12.47□□□□□ -0.41
SDC2-202ENST00000518385 A0A096LPF7 62 aa12.46□□□□□ -0.42
SDC2-202ENST00000518385 IGKV3D-7A0A0C4DH55 119 aa12.46□□□□□ -0.42
SDC2-202ENST00000518385 HTN3P15516 51 aa12.46□□□□□ -0.42
SDC2-202ENST00000518385 PDE6GP18545 87 aa12.46□□□□□ -0.42
SDC2-202ENST00000518385 UPK3BQ9BT76 320 aa12.46□□□□□ -0.42
SDC2-202ENST00000518385 DNHD1Q96M86 4753 aa12.45□□□□□ -0.42
SDC2-202ENST00000518385 GHRHP01286 108 aa12.45□□□□□ -0.42
SDC2-202ENST00000518385 UBL5Q9BZL1 73 aa12.45□□□□□ -0.42
SDC2-202ENST00000518385 C9orf129Q5T035 196 aaKnown RBP12.44□□□□□ -0.42
SDC2-202ENST00000518385 LOC110117498A0A087WWA1 95 aa12.43□□□□□ -0.42
SDC2-202ENST00000518385 NANOS2P60321 138 aaKnown RBP12.43□□□□□ -0.42
SDC2-202ENST00000518385 A0A0J9YWU9 116 aa12.42□□□□□ -0.42
SDC2-202ENST00000518385 XCL1P47992 114 aa12.41□□□□□ -0.42
SDC2-202ENST00000518385 KIAA0087Q14695 138 aa12.41□□□□□ -0.42
SDC2-202ENST00000518385 ZNF561-AS1K7EIQ3 104 aa12.4□□□□□ -0.42
SDC2-202ENST00000518385 B9D2Q9BPU9 175 aa12.4□□□□□ -0.42
SDC2-202ENST00000518385 SLPIP03973 132 aa12.39□□□□□ -0.43
SDC2-202ENST00000518385 REG3AQ06141 175 aa12.39□□□□□ -0.43
SDC2-202ENST00000518385 C5orf47Q569G3 176 aa12.39□□□□□ -0.43
SDC2-202ENST00000518385 LINC00575Q6W349 94 aa12.39□□□□□ -0.43
SDC2-202ENST00000518385 LINC00269Q8N2A0 174 aa12.39□□□□□ -0.43
SDC2-202ENST00000518385 ANGP03950 147 aaKnown RBP12.38□□□□□ -0.43
SDC2-202ENST00000518385 Q6ZTC4 211 aa12.37□□□□□ -0.43
SDC2-202ENST00000518385 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
SDC2-202ENST00000518385 C11orf45Q8TAV5 145 aa12.37□□□□□ -0.43
SDC2-202ENST00000518385 DPH3Q96FX2 82 aa12.36□□□□□ -0.43
SDC2-202ENST00000518385 TENM3Q9P273 2699 aa12.36□□□□□ -0.43
SDC2-202ENST00000518385 RBM3P98179 157 aaKnown RBP12.35□□□□□ -0.43
SDC2-202ENST00000518385 CHCHD10Q8WYQ3 142 aaPredicted RBP12.35□□□□□ -0.43
SDC2-202ENST00000518385 PRR34Q9NV39 138 aa12.35□□□□□ -0.43
SDC2-202ENST00000518385 FAM19A5Q7Z5A7 132 aaPredicted RBP12.34□□□□□ -0.43
SDC2-202ENST00000518385 GVQW2A0A096LPI5 108 aaPredicted RBP12.33□□□□□ -0.44
SDC2-202ENST00000518385 LOC107984640A0A0U1RRK4 108 aa12.33□□□□□ -0.44
SDC2-202ENST00000518385 Q6ZQT0 140 aa12.33□□□□□ -0.44
SDC2-202ENST00000518385 A0A087WVE0 104 aa12.32□□□□□ -0.44
SDC2-202ENST00000518385 C6orf99Q4VX62 202 aa12.32□□□□□ -0.44
SDC2-202ENST00000518385 HUWE1Q7Z6Z7 4374 aaKnown RBP12.32□□□□□ -0.44
SDC2-202ENST00000518385 DEFB131BA0A096LNP1 70 aa12.31□□□□□ -0.44
SDC2-202ENST00000518385 TRBV7-6A0A0J9YX20 115 aa12.31□□□□□ -0.44
SDC2-202ENST00000518385 TRAV7A0A075B6U4 112 aa12.3□□□□□ -0.44
SDC2-202ENST00000518385 CXCL6P80162 114 aa12.3□□□□□ -0.44
SDC2-202ENST00000518385 CLPSL2Q6UWE3 100 aa12.3□□□□□ -0.44
SDC2-202ENST00000518385 IGLV6-57P01721 117 aa12.3□□□□□ -0.44
SDC2-202ENST00000518385 TRAV10A0A0B4J240 114 aa12.28□□□□□ -0.44
SDC2-202ENST00000518385 DSCR8Q96T75 97 aa12.28□□□□□ -0.44
SDC2-202ENST00000518385 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.27□□□□□ -0.44
SDC2-202ENST00000518385 KLK12Q9UKR0 248 aa12.27□□□□□ -0.44
SDC2-202ENST00000518385 DNAH9Q9NYC9 4486 aa12.27□□□□□ -0.45
SDC2-202ENST00000518385 ENHOQ6UWT2 76 aa12.26□□□□□ -0.45
SDC2-202ENST00000518385 Q8N3U1 123 aa12.26□□□□□ -0.45
SDC2-202ENST00000518385 SPAG11BQ08648 103 aa12.25□□□□□ -0.45
SDC2-202ENST00000518385 IGLV10-54A0A075B6I4 117 aa12.24□□□□□ -0.45
SDC2-202ENST00000518385 ESRGQ1W209 222 aa12.24□□□□□ -0.45
SDC2-202ENST00000518385 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
SDC2-202ENST00000518385 DIRC1Q969H9 104 aa12.22□□□□□ -0.45
SDC2-202ENST00000518385 TRAV23DV6A0A075B6W5 121 aa12.22□□□□□ -0.45
SDC2-202ENST00000518385 NDUFC1O43677 76 aa12.22□□□□□ -0.45
SDC2-202ENST00000518385 PRR3P79522 188 aaKnown RBP12.22□□□□□ -0.45
SDC2-202ENST00000518385 LINC01556Q5JQF7 62 aa12.22□□□□□ -0.45
SDC2-202ENST00000518385 FAM19A1Q7Z5A9 133 aa12.22□□□□□ -0.45
SDC2-202ENST00000518385 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
SDC2-202ENST00000518385 CYSTM1Q9H1C7 97 aa12.22□□□□□ -0.45
SDC2-202ENST00000518385 LINC01547P58512 204 aaPredicted RBP12.2□□□□□ -0.46
SDC2-202ENST00000518385 KLKP1Q107X0 134 aa12.2□□□□□ -0.46
SDC2-202ENST00000518385 FAM236DA0A1B0GTK5 79 aa12.19□□□□□ -0.46
SDC2-202ENST00000518385 FAM236CP0DP71 79 aa12.19□□□□□ -0.46
SDC2-202ENST00000518385 ATP5EP56381 51 aaPredicted RBP12.19□□□□□ -0.46
SDC2-202ENST00000518385 Q6ZVQ6 151 aa12.19□□□□□ -0.46
SDC2-202ENST00000518385 SERP1Q9Y6X1 66 aa12.18□□□□□ -0.46
SDC2-202ENST00000518385 COL7A1Q02388 2944 aa12.18□□□□□ -0.46
SDC2-202ENST00000518385 MEGF8Q7Z7M0 2845 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms