RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 KRTAP7-1Q8IUC3 87 aa6.75□□□□□ -1.33
TRAPPC9-203ENST00000517667 PMCHL2Q9BQD1 86 aa6.75□□□□□ -1.33
TRAPPC9-203ENST00000517667 CDIP1Q9H305 208 aa6.75□□□□□ -1.33
TRAPPC9-203ENST00000517667 TRBV30A0A0K0K1B3 111 aa6.74□□□□□ -1.33
TRAPPC9-203ENST00000517667 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
TRAPPC9-203ENST00000517667 ATOH7Q8N100 152 aa6.74□□□□□ -1.33
TRAPPC9-203ENST00000517667 TYMSOSQ8TAI1 123 aa6.74□□□□□ -1.33
TRAPPC9-203ENST00000517667 UQCR10Q9UDW1 63 aa6.74□□□□□ -1.33
TRAPPC9-203ENST00000517667 IGLV4-3A0A075B6K6 122 aa6.73□□□□□ -1.33
TRAPPC9-203ENST00000517667 PCP4L1A6NKN8 68 aa6.73□□□□□ -1.33
TRAPPC9-203ENST00000517667 NDUFC2-KCTD14E9PQ53 114 aa6.73□□□□□ -1.33
TRAPPC9-203ENST00000517667 CRYGAP11844 174 aa6.73□□□□□ -1.33
TRAPPC9-203ENST00000517667 CST9LQ9H4G1 147 aa6.73□□□□□ -1.33
TRAPPC9-203ENST00000517667 A0A087X002 238 aa6.72□□□□□ -1.33
TRAPPC9-203ENST00000517667 ZC2HC1BQ5TFG8 222 aa6.72□□□□□ -1.33
TRAPPC9-203ENST00000517667 GEMIN7Q9H840 131 aaKnown RBP6.72□□□□□ -1.33
TRAPPC9-203ENST00000517667 MUC17Q685J3 4493 aa6.72□□□□□ -1.33
TRAPPC9-203ENST00000517667 H3BRM9 83 aa6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 RPL28P46779 137 aaKnown RBP6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 HERVK_113P63121 156 aa6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 TMEM170BQ5T4T1 132 aa6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 SLC25A34Q6PIV7 304 aa6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 AMELXQ99217 191 aa6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 MIEN1Q9BRT3 115 aa6.71□□□□□ -1.34
TRAPPC9-203ENST00000517667 FSIP2Q5CZC0 6907 aa6.7□□□□□ -1.34
TRAPPC9-203ENST00000517667 TINCRA0A1B0GVN0 87 aa6.7□□□□□ -1.34
TRAPPC9-203ENST00000517667 C11orf86A6NJI1 115 aa6.7□□□□□ -1.34
TRAPPC9-203ENST00000517667 DDTP30046 118 aa6.7□□□□□ -1.34
TRAPPC9-203ENST00000517667 LCE2DQ5TA82 110 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC9-203ENST00000517667 PRO1933Q9H354 126 aa6.7□□□□□ -1.34
TRAPPC9-203ENST00000517667 IGLC3P0DOY3 106 aa6.69□□□□□ -1.34
TRAPPC9-203ENST00000517667 NMUP48645 174 aa6.69□□□□□ -1.34
TRAPPC9-203ENST00000517667 KIAA0087Q14695 138 aa6.69□□□□□ -1.34
TRAPPC9-203ENST00000517667 LBHQ53QV2 105 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC9-203ENST00000517667 RETNLBQ9BQ08 111 aa6.69□□□□□ -1.34
TRAPPC9-203ENST00000517667 COX8AP10176 69 aa6.68□□□□□ -1.34
TRAPPC9-203ENST00000517667 CRCT1Q9UGL9 99 aa6.68□□□□□ -1.34
TRAPPC9-203ENST00000517667 IGLV7-46A0A075B6I9 117 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 E9PLD3 99 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 DLEU1O43261 78 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 BCE1O60756 84 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 CTAG1AP78358 180 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 LINC00469Q8N7U9 141 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 LINC00304Q8N9R0 145 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 PLEKHB2Q96CS7 222 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 C22orf24Q9Y442 160 aa6.67□□□□□ -1.34
TRAPPC9-203ENST00000517667 LGALS3P17931 250 aaKnown RBP6.66□□□□□ -1.34
TRAPPC9-203ENST00000517667 LINC01547P58512 204 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC9-203ENST00000517667 C2orf82Q6UX34 121 aa6.66□□□□□ -1.34
TRAPPC9-203ENST00000517667 FAM19A3Q7Z5A8 133 aa6.66□□□□□ -1.34
TRAPPC9-203ENST00000517667 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
TRAPPC9-203ENST00000517667 C14orf144Q96I85 54 aa6.66□□□□□ -1.34
TRAPPC9-203ENST00000517667 TP73-AS1Q9UF72 201 aa6.66□□□□□ -1.34
TRAPPC9-203ENST00000517667 ZNF22P17026 224 aaPredicted RBP6.65□□□□□ -1.34
TRAPPC9-203ENST00000517667 FAM229BQ4G0N7 80 aa6.65□□□□□ -1.34
TRAPPC9-203ENST00000517667 M0R143 59 aa6.64□□□□□ -1.35
TRAPPC9-203ENST00000517667 KRTAP13-2Q52LG2 175 aa6.64□□□□□ -1.35
TRAPPC9-203ENST00000517667 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
TRAPPC9-203ENST00000517667 SFTA2Q6UW10 78 aa6.64□□□□□ -1.35
TRAPPC9-203ENST00000517667 MRPL55Q7Z7F7 128 aaKnown RBP6.64□□□□□ -1.35
TRAPPC9-203ENST00000517667 BOD1L2Q8IYS8 172 aa6.64□□□□□ -1.35
TRAPPC9-203ENST00000517667 LINC01561Q8N1V8 128 aa6.64□□□□□ -1.35
TRAPPC9-203ENST00000517667 TMEM223A0PJW6 202 aa6.63□□□□□ -1.35
TRAPPC9-203ENST00000517667 LEPROTO15243 131 aa6.63□□□□□ -1.35
TRAPPC9-203ENST00000517667 PRSS2P07478 247 aa6.63□□□□□ -1.35
TRAPPC9-203ENST00000517667 CKS1BP61024 79 aa6.63□□□□□ -1.35
TRAPPC9-203ENST00000517667 LINC00242Q5T6M2 205 aa6.63□□□□□ -1.35
TRAPPC9-203ENST00000517667 SCGB1D4Q6XE38 83 aa6.63□□□□□ -1.35
TRAPPC9-203ENST00000517667 IGLV5-45A0A087WSX0 123 aa6.62□□□□□ -1.35
TRAPPC9-203ENST00000517667 MYMXA0A1B0GTQ4 84 aa6.62□□□□□ -1.35
TRAPPC9-203ENST00000517667 ZNF815PA8K554 130 aa6.62□□□□□ -1.35
TRAPPC9-203ENST00000517667 J3QQQ9 107 aa6.62□□□□□ -1.35
TRAPPC9-203ENST00000517667 PPDPFQ9H3Y8 114 aa6.62□□□□□ -1.35
TRAPPC9-203ENST00000517667 XAGE1AQ9HD64 81 aa6.62□□□□□ -1.35
TRAPPC9-203ENST00000517667 HIGD1BQ9P298 99 aa6.62□□□□□ -1.35
TRAPPC9-203ENST00000517667 IGKV2D-26A0A0A0MRZ7 120 aa6.61□□□□□ -1.35
TRAPPC9-203ENST00000517667 ANAPC11Q9NYG5 84 aa6.61□□□□□ -1.35
TRAPPC9-203ENST00000517667 LINC00587B1AMM8 73 aa6.6□□□□□ -1.35
TRAPPC9-203ENST00000517667 HSD52Q0P140 79 aa6.6□□□□□ -1.35
TRAPPC9-203ENST00000517667 TAL2Q16559 108 aa6.6□□□□□ -1.35
TRAPPC9-203ENST00000517667 C6orf226Q5I0X4 101 aa6.6□□□□□ -1.35
TRAPPC9-203ENST00000517667 Q8IZM0 81 aa6.6□□□□□ -1.35
TRAPPC9-203ENST00000517667 COPS9Q8WXC6 57 aa6.6□□□□□ -1.35
TRAPPC9-203ENST00000517667 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
TRAPPC9-203ENST00000517667 A6NJY4 79 aa6.59□□□□□ -1.35
TRAPPC9-203ENST00000517667 TMEM238C9JI98 176 aa6.59□□□□□ -1.35
TRAPPC9-203ENST00000517667 UBE2AP49459 152 aa6.59□□□□□ -1.35
TRAPPC9-203ENST00000517667 HERV-K104P63124 156 aa6.59□□□□□ -1.35
TRAPPC9-203ENST00000517667 TOMM7Q9P0U1 55 aa6.59□□□□□ -1.35
TRAPPC9-203ENST00000517667 CDKN2A-AS1Q9UH64 79 aa6.59□□□□□ -1.35
TRAPPC9-203ENST00000517667 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
TRAPPC9-203ENST00000517667 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
TRAPPC9-203ENST00000517667 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
TRAPPC9-203ENST00000517667 LINC00167Q96N53 147 aa6.58□□□□□ -1.36
TRAPPC9-203ENST00000517667 A6NDN8 102 aa6.57□□□□□ -1.36
TRAPPC9-203ENST00000517667 RPL37AP8A6NKH3 93 aa6.57□□□□□ -1.36
TRAPPC9-203ENST00000517667 SPINK8P0C7L1 97 aa6.57□□□□□ -1.36
TRAPPC9-203ENST00000517667 CXCL5P42830 114 aa6.57□□□□□ -1.36
TRAPPC9-203ENST00000517667 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms