RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 ZNF22P17026 224 aaPredicted RBP8.62□□□□□ -1.03
CSGALNACT1-204ENST00000517494 COX17Q14061 63 aa8.62□□□□□ -1.03
CSGALNACT1-204ENST00000517494 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
CSGALNACT1-204ENST00000517494 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
CSGALNACT1-204ENST00000517494 A0A0U1RRA0 63 aa8.6□□□□□ -1.03
CSGALNACT1-204ENST00000517494 LINC00158P58513 81 aa8.6□□□□□ -1.03
CSGALNACT1-204ENST00000517494 FSIP2Q5CZC0 6907 aa8.6□□□□□ -1.03
CSGALNACT1-204ENST00000517494 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
CSGALNACT1-204ENST00000517494 TMEM170BQ5T4T1 132 aa8.58□□□□□ -1.04
CSGALNACT1-204ENST00000517494 KRTAP4-1Q9BYQ7 146 aa8.58□□□□□ -1.04
CSGALNACT1-204ENST00000517494 TRAV9-1A0A075B6T8 112 aa8.57□□□□□ -1.04
CSGALNACT1-204ENST00000517494 S100PP25815 95 aa8.57□□□□□ -1.04
CSGALNACT1-204ENST00000517494 NCR3O14931 201 aa8.56□□□□□ -1.04
CSGALNACT1-204ENST00000517494 SPINK1P00995 79 aa8.56□□□□□ -1.04
CSGALNACT1-204ENST00000517494 FABP9Q0Z7S8 132 aa8.56□□□□□ -1.04
CSGALNACT1-204ENST00000517494 SFTA2Q6UW10 78 aa8.56□□□□□ -1.04
CSGALNACT1-204ENST00000517494 NDUFA12Q9UI09 145 aa8.56□□□□□ -1.04
CSGALNACT1-204ENST00000517494 C11orf86A6NJI1 115 aa8.55□□□□□ -1.04
CSGALNACT1-204ENST00000517494 LCE2DQ5TA82 110 aaPredicted RBP8.55□□□□□ -1.04
CSGALNACT1-204ENST00000517494 SMCR5Q8TEV8 140 aa8.55□□□□□ -1.04
CSGALNACT1-204ENST00000517494 ETDCA0A1B0GVM5 59 aa8.54□□□□□ -1.04
CSGALNACT1-204ENST00000517494 PRYO14603 147 aa8.54□□□□□ -1.04
CSGALNACT1-204ENST00000517494 ATP6V1G1O75348 118 aa8.54□□□□□ -1.04
CSGALNACT1-204ENST00000517494 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
CSGALNACT1-204ENST00000517494 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
CSGALNACT1-204ENST00000517494 A0A096LNJ9 63 aa8.53□□□□□ -1.04
CSGALNACT1-204ENST00000517494 IGLV9-49A0A0B4J1Y8 123 aa8.53□□□□□ -1.04
CSGALNACT1-204ENST00000517494 MOBPQ13875 183 aa8.53□□□□□ -1.04
CSGALNACT1-204ENST00000517494 GAGE2AQ6NT46 116 aa8.53□□□□□ -1.04
CSGALNACT1-204ENST00000517494 BOD1L2Q8IYS8 172 aa8.53□□□□□ -1.04
CSGALNACT1-204ENST00000517494 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
CSGALNACT1-204ENST00000517494 HBDP02042 147 aa8.52□□□□□ -1.05
CSGALNACT1-204ENST00000517494 MEIG1Q5JSS6 88 aa8.51□□□□□ -1.05
CSGALNACT1-204ENST00000517494 SMIM13P0DJ93 91 aa8.5□□□□□ -1.05
CSGALNACT1-204ENST00000517494 COX19Q49B96 90 aa8.5□□□□□ -1.05
CSGALNACT1-204ENST00000517494 FAM19A2Q8N3H0 131 aa8.5□□□□□ -1.05
CSGALNACT1-204ENST00000517494 LINC00614P0C842 121 aa8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 SPRR1AP35321 89 aa8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 LINC00483Q53H64 154 aa8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 Q8N377 158 aa8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 URB1-AS1Q96HZ7 61 aa8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 SEC11CQ9BY50 192 aa8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 CHTOPQ9Y3Y2 248 aaKnown RBP8.48□□□□□ -1.05
CSGALNACT1-204ENST00000517494 TRBV10-3A0A0K0K1G6 114 aa8.47□□□□□ -1.05
CSGALNACT1-204ENST00000517494 TMEM218A2RU14 115 aa8.47□□□□□ -1.05
CSGALNACT1-204ENST00000517494 S100A12P80511 92 aa8.47□□□□□ -1.05
CSGALNACT1-204ENST00000517494 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
CSGALNACT1-204ENST00000517494 SLC25A20O43772 301 aa8.46□□□□□ -1.06
CSGALNACT1-204ENST00000517494 C18orf32Q8TCD1 76 aa8.46□□□□□ -1.06
CSGALNACT1-204ENST00000517494 TMEM223A0PJW6 202 aa8.45□□□□□ -1.06
CSGALNACT1-204ENST00000517494 KRTAP4-16G5E9R7 235 aaPredicted RBP8.45□□□□□ -1.06
CSGALNACT1-204ENST00000517494 ERC2-IT1O76042 136 aa8.45□□□□□ -1.06
CSGALNACT1-204ENST00000517494 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
CSGALNACT1-204ENST00000517494 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
CSGALNACT1-204ENST00000517494 XP32Q5T750 250 aa8.44□□□□□ -1.06
CSGALNACT1-204ENST00000517494 C9orf153Q5TBE3 101 aa8.44□□□□□ -1.06
CSGALNACT1-204ENST00000517494 UQCC3Q6UW78 93 aa8.44□□□□□ -1.06
CSGALNACT1-204ENST00000517494 TRAPPC1Q9Y5R8 145 aa8.44□□□□□ -1.06
CSGALNACT1-204ENST00000517494 B5MCH6 92 aa8.43□□□□□ -1.06
CSGALNACT1-204ENST00000517494 SSBP3-AS1Q7Z2R9 100 aa8.43□□□□□ -1.06
CSGALNACT1-204ENST00000517494 RPS10P5Q9NQ39 176 aa8.42□□□□□ -1.06
CSGALNACT1-204ENST00000517494 DDTP30046 118 aa8.4□□□□□ -1.06
CSGALNACT1-204ENST00000517494 HERV-K104P63124 156 aa8.4□□□□□ -1.06
CSGALNACT1-204ENST00000517494 LCE2CQ5TA81 110 aa8.4□□□□□ -1.06
CSGALNACT1-204ENST00000517494 Q9BRP9 147 aa8.4□□□□□ -1.06
CSGALNACT1-204ENST00000517494 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
CSGALNACT1-204ENST00000517494 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
CSGALNACT1-204ENST00000517494 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
CSGALNACT1-204ENST00000517494 Q6ZRX8 168 aa8.38□□□□□ -1.07
CSGALNACT1-204ENST00000517494 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
CSGALNACT1-204ENST00000517494 TRAV12-1A0A0B4J245 112 aa8.37□□□□□ -1.07
CSGALNACT1-204ENST00000517494 RHEBQ15382 184 aa8.37□□□□□ -1.07
CSGALNACT1-204ENST00000517494 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
CSGALNACT1-204ENST00000517494 IGLV8-61A0A075B6I0 122 aa8.35□□□□□ -1.07
CSGALNACT1-204ENST00000517494 H0Y8G0 127 aa8.35□□□□□ -1.07
CSGALNACT1-204ENST00000517494 MT1HP80294 61 aa8.35□□□□□ -1.07
CSGALNACT1-204ENST00000517494 S100A7L2Q5SY68 101 aa8.35□□□□□ -1.07
CSGALNACT1-204ENST00000517494 C9orf92A6NGG3 77 aa8.34□□□□□ -1.07
CSGALNACT1-204ENST00000517494 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
CSGALNACT1-204ENST00000517494 COMMD7Q86VX2 200 aa8.34□□□□□ -1.07
CSGALNACT1-204ENST00000517494 MIEN1Q9BRT3 115 aa8.34□□□□□ -1.07
CSGALNACT1-204ENST00000517494 TRBV10-2A0A0K0K1G8 114 aa8.33□□□□□ -1.08
CSGALNACT1-204ENST00000517494 CFC1BP0CG36 223 aa8.33□□□□□ -1.08
CSGALNACT1-204ENST00000517494 JOSD1Q15040 202 aaPredicted RBP8.33□□□□□ -1.08
CSGALNACT1-204ENST00000517494 ST20-AS1Q8NBB2 130 aa8.33□□□□□ -1.08
CSGALNACT1-204ENST00000517494 SPANXB1Q9NS25 103 aaPredicted RBP8.33□□□□□ -1.08
CSGALNACT1-204ENST00000517494 TSPEAR-AS2P59090 65 aa8.32□□□□□ -1.08
CSGALNACT1-204ENST00000517494 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
CSGALNACT1-204ENST00000517494 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
CSGALNACT1-204ENST00000517494 CHCHD1Q96BP2 118 aaKnown RBP8.31□□□□□ -1.08
CSGALNACT1-204ENST00000517494 NPC2P61916 151 aa8.29□□□□□ -1.08
CSGALNACT1-204ENST00000517494 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
CSGALNACT1-204ENST00000517494 LOC107984156A0A0G2JMH3 177 aa8.28□□□□□ -1.08
CSGALNACT1-204ENST00000517494 LEPROTO15243 131 aa8.28□□□□□ -1.08
CSGALNACT1-204ENST00000517494 ZNF73O43830 326 aaPredicted RBP8.28□□□□□ -1.08
CSGALNACT1-204ENST00000517494 IGLV6-57P01721 117 aa8.28□□□□□ -1.08
CSGALNACT1-204ENST00000517494 C10orf91Q5T1B1 145 aa8.28□□□□□ -1.08
CSGALNACT1-204ENST00000517494 ARL17AQ8IVW1 177 aa8.28□□□□□ -1.08
CSGALNACT1-204ENST00000517494 HSBP1O75506 76 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms