RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 CLIP1P30622 1438 aa-2.68□□□□□ -2.84
RNU6-1088P-201ENST00000516850 FOCADQ5VW36 1801 aa-2.68□□□□□ -2.84
RNU6-1088P-201ENST00000516850 MRC2Q9UBG0 1479 aa-2.68□□□□□ -2.84
RNU6-1088P-201ENST00000516850 GNG11P61952 73 aa-2.68□□□□□ -2.84
RNU6-1088P-201ENST00000516850 C12orf57Q99622 126 aa-2.69□□□□□ -2.84
RNU6-1088P-201ENST00000516850 TEX15Q9BXT5 2789 aa-2.7□□□□□ -2.84
RNU6-1088P-201ENST00000516850 SPTY2D1-AS1A0A0U1RR47 76 aa-2.7□□□□□ -2.84
RNU6-1088P-201ENST00000516850 Q0VG73 95 aa-2.7□□□□□ -2.84
RNU6-1088P-201ENST00000516850 NAIPQ13075 1403 aa-2.7□□□□□ -2.84
RNU6-1088P-201ENST00000516850 UBE2L5PA0A1B0GUS4 154 aa-2.71□□□□□ -2.84
RNU6-1088P-201ENST00000516850 UBE2L3P68036 154 aaKnown RBP-2.71□□□□□ -2.84
RNU6-1088P-201ENST00000516850 KIF20BQ96Q89 1820 aa-2.71□□□□□ -2.84
RNU6-1088P-201ENST00000516850 A0A087WVE0 104 aa-2.72□□□□□ -2.84
RNU6-1088P-201ENST00000516850 KNDC1Q76NI1 1749 aa-2.72□□□□□ -2.84
RNU6-1088P-201ENST00000516850 PRO1854Q9UHT4 67 aa-2.72□□□□□ -2.84
RNU6-1088P-201ENST00000516850 GCN1Q92616 2671 aaKnown RBP-2.72□□□□□ -2.85
RNU6-1088P-201ENST00000516850 TARBP1Q13395 1621 aaKnown RBP-2.72□□□□□ -2.85
RNU6-1088P-201ENST00000516850 A2ML1A8K2U0 1454 aa-2.72□□□□□ -2.85
RNU6-1088P-201ENST00000516850 CMYA5Q8N3K9 4069 aa-2.73□□□□□ -2.85
RNU6-1088P-201ENST00000516850 NBEAQ8NFP9 2946 aa-2.73□□□□□ -2.85
RNU6-1088P-201ENST00000516850 A0A0G2JND7 137 aa-2.73□□□□□ -2.85
RNU6-1088P-201ENST00000516850 MT1HP80294 61 aa-2.73□□□□□ -2.85
RNU6-1088P-201ENST00000516850 PAIP2BQ9ULR5 123 aaKnown RBP-2.73□□□□□ -2.85
RNU6-1088P-201ENST00000516850 SACSQ9NZJ4 4579 aa-2.74□□□□□ -2.85
RNU6-1088P-201ENST00000516850 H3BQF6 201 aa-2.74□□□□□ -2.85
RNU6-1088P-201ENST00000516850 LRRK2Q5S007 2527 aa-2.74□□□□□ -2.85
RNU6-1088P-201ENST00000516850 CCDC168Q8NDH2 2452 aa-2.75□□□□□ -2.85
RNU6-1088P-201ENST00000516850 FAM186AA6NE01 2351 aa-2.75□□□□□ -2.85
RNU6-1088P-201ENST00000516850 ATP5EP56381 51 aaPredicted RBP-2.75□□□□□ -2.85
RNU6-1088P-201ENST00000516850 KTN1Q86UP2 1357 aaKnown RBP-2.75□□□□□ -2.85
RNU6-1088P-201ENST00000516850 RELNP78509 3460 aa-2.76□□□□□ -2.85
RNU6-1088P-201ENST00000516850 USP9XQ93008 2570 aaPredicted RBP-2.76□□□□□ -2.85
RNU6-1088P-201ENST00000516850 WDR87Q6ZQQ6 2873 aa-2.76□□□□□ -2.85
RNU6-1088P-201ENST00000516850 GNGT1P63211 74 aa-2.76□□□□□ -2.85
RNU6-1088P-201ENST00000516850 SELENOWP63302 87 aa-2.76□□□□□ -2.85
RNU6-1088P-201ENST00000516850 VAMP8Q9BV40 100 aa-2.76□□□□□ -2.85
RNU6-1088P-201ENST00000516850 SHPRHQ149N8 1683 aa-2.76□□□□□ -2.85
RNU6-1088P-201ENST00000516850 H0Y9P7 68 aa-2.77□□□□□ -2.85
RNU6-1088P-201ENST00000516850 PP6455Q8WZ26 134 aa-2.77□□□□□ -2.85
RNU6-1088P-201ENST00000516850 MON2Q7Z3U7 1717 aa-2.77□□□□□ -2.85
RNU6-1088P-201ENST00000516850 CUX1P39880 1505 aa-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 NAP1L6A6NFF2 107 aa-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 OOSP1A8MZH6 123 aa-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 ARMS2P0C7Q2 107 aa-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 LINC00470Q9BZP3 86 aa-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 PSENENQ9NZ42 101 aa-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 SCAPERQ9BY12 1400 aa-2.78□□□□□ -2.85
RNU6-1088P-201ENST00000516850 MAPKBP1O60336 1514 aa-2.78□□□□□ -2.86
RNU6-1088P-201ENST00000516850 DSPP15924 2871 aaKnown RBP-2.79□□□□□ -2.86
RNU6-1088P-201ENST00000516850 TRBV7-7A0A0K0K1E9 115 aa-2.79□□□□□ -2.86
RNU6-1088P-201ENST00000516850 DEFB107AQ8IZN7 70 aa-2.79□□□□□ -2.86
RNU6-1088P-201ENST00000516850 MBD5Q9P267 1494 aa-2.79□□□□□ -2.86
RNU6-1088P-201ENST00000516850 FGF7P21781 194 aa-2.8□□□□□ -2.86
RNU6-1088P-201ENST00000516850 RIF1Q5UIP0 2472 aaKnown RBP-2.8□□□□□ -2.86
RNU6-1088P-201ENST00000516850 DNAH7Q8WXX0 4024 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 UTP20O75691 2785 aaKnown RBP-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 C4AP0C0L4 1744 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 C4BP0C0L5 1744 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 C7orf77A4D0Y5 90 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 FAM24AA6NFZ4 105 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 GNG7O60262 68 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 NMSQ5H8A3 153 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 DPH3P1Q9H4G8 78 aa-2.81□□□□□ -2.86
RNU6-1088P-201ENST00000516850 TRIOO75962 3097 aa-2.82□□□□□ -2.86
RNU6-1088P-201ENST00000516850 NBEAL2Q6ZNJ1 2754 aa-2.82□□□□□ -2.86
RNU6-1088P-201ENST00000516850 K7EP34 96 aa-2.83□□□□□ -2.86
RNU6-1088P-201ENST00000516850 HSD52Q0P140 79 aa-2.83□□□□□ -2.86
RNU6-1088P-201ENST00000516850 C5P01031 1676 aa-2.83□□□□□ -2.86
RNU6-1088P-201ENST00000516850 ALKQ9UM73 1620 aa-2.83□□□□□ -2.86
RNU6-1088P-201ENST00000516850 CUL7Q14999 1698 aa-2.84□□□□□ -2.86
RNU6-1088P-201ENST00000516850 CRYM-AS1A6NIL9 109 aa-2.84□□□□□ -2.86
RNU6-1088P-201ENST00000516850 PREX1Q8TCU6 1659 aa-2.85□□□□□ -2.87
RNU6-1088P-201ENST00000516850 C1orf54Q8WWF1 131 aa-2.86□□□□□ -2.87
RNU6-1088P-201ENST00000516850 MAP3K1Q13233 1512 aa-2.87□□□□□ -2.87
RNU6-1088P-201ENST00000516850 ABCC5O15440 1437 aa-2.87□□□□□ -2.87
RNU6-1088P-201ENST00000516850 UBR3Q6ZT12 1888 aa-2.88□□□□□ -2.87
RNU6-1088P-201ENST00000516850 TMEM262E9PQX1 116 aa-2.88□□□□□ -2.87
RNU6-1088P-201ENST00000516850 AKAIN1P0CW23 69 aa-2.88□□□□□ -2.87
RNU6-1088P-201ENST00000516850 S4R3F8 94 aa-2.88□□□□□ -2.87
RNU6-1088P-201ENST00000516850 QSER1Q2KHR3 1735 aa-2.88□□□□□ -2.87
RNU6-1088P-201ENST00000516850 CHD1O14646 1710 aa-2.89□□□□□ -2.87
RNU6-1088P-201ENST00000516850 CGREF1Q99674 301 aa-2.89□□□□□ -2.87
RNU6-1088P-201ENST00000516850 ACACBO00763 2458 aa-2.9□□□□□ -2.87
RNU6-1088P-201ENST00000516850 AP4S1Q9Y587 144 aa-2.9□□□□□ -2.87
RNU6-1088P-201ENST00000516850 TOPAZ1Q8N9V7 1692 aa-2.9□□□□□ -2.87
RNU6-1088P-201ENST00000516850 DNAH8Q96JB1 4490 aa-2.91□□□□□ -2.88
RNU6-1088P-201ENST00000516850 RGPD8O14715 1765 aaPredicted RBP-2.91□□□□□ -2.88
RNU6-1088P-201ENST00000516850 RGPD5Q99666 1765 aa-2.91□□□□□ -2.88
RNU6-1088P-201ENST00000516850 H7BZZ5 65 aa-2.91□□□□□ -2.88
RNU6-1088P-201ENST00000516850 K7EP13 123 aa-2.91□□□□□ -2.88
RNU6-1088P-201ENST00000516850 DEFB1P60022 68 aa-2.91□□□□□ -2.88
RNU6-1088P-201ENST00000516850 DEFB110Q30KQ9 67 aa-2.91□□□□□ -2.88
RNU6-1088P-201ENST00000516850 H0YAA0 97 aa-2.92□□□□□ -2.88
RNU6-1088P-201ENST00000516850 KRTDAPP60985 99 aa-2.92□□□□□ -2.88
RNU6-1088P-201ENST00000516850 COX6B2Q6YFQ2 88 aa-2.92□□□□□ -2.88
RNU6-1088P-201ENST00000516850 SAMD9Q5K651 1589 aa-2.92□□□□□ -2.88
RNU6-1088P-201ENST00000516850 PSMG4Q5JS54 123 aa-2.93□□□□□ -2.88
RNU6-1088P-201ENST00000516850 ARHGAP5Q13017 1502 aa-2.94□□□□□ -2.88
RNU6-1088P-201ENST00000516850 CELSR3Q9NYQ7 3312 aa-2.94□□□□□ -2.88
Retrieved 100 of 20,778 RNA–protein pairs in 451.4 ms