RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 SUMO2P61956 95 aaKnown RBP1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 SRSF9Q13242 221 aaKnown RBP eCLIP1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 LINC01620Q4KN68 170 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 ORMDL2Q53FV1 153 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 LYRM7Q5U5X0 104 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 REG3GQ6UW15 175 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 LYPD5Q6UWN5 251 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 KRTAP11-1Q8IUC1 163 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 C14orf178Q8N769 122 aaPredicted RBP1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 Q8N814 137 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 FAM104AQ969W3 186 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 DNAJC30Q96LL9 226 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 SCGB3A1Q96QR1 104 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 LITAFQ99732 161 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 ANAPC13Q9BS18 74 aa1.99□□□□□ -2.09
SCARNA13-201ENST00000516672 LOC107984156A0A0G2JMH3 177 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 TRBV7-7A0A0K0K1E9 115 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 A4D1N5 150 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 C9JAW5 83 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 TMEM262E9PQX1 116 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 SLC25A20O43772 301 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 LINC00694P0DN24 101 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 GYPEP15421 78 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 POLR2KP53803 58 aaKnown RBP1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 HERV-K104P63124 156 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 RPL36AP83881 106 aaKnown RBP1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 PMVKQ15126 192 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 ESRGQ1W209 222 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 SFTA2Q6UW10 78 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 C2orf66Q6UXQ4 117 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 DAZ4Q86SG3 579 aaKnown RBP1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 ARL17AQ8IVW1 177 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 RPL36ALQ969Q0 106 aaKnown RBP1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 TIMM17AQ99595 171 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 CHCHD7Q9BUK0 85 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 KRTAP9-8Q9BYQ0 159 aa1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 DAZ3Q9NR90 486 aaKnown RBP1.98□□□□□ -2.09
SCARNA13-201ENST00000516672 A0A087WWL8 130 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 TRBV6-5A0A0K0K1A5 114 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 TRBV10-2A0A0K0K1G8 114 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 FAM240AA0A1B0GVK7 77 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 TMEM223A0PJW6 202 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE12JA6NER3 117 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 F5H697 171 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 J3QQQ9 107 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 M0QY20 66 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 LEPROTO15243 131 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 TRIAP1O43715 76 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 ZNF22P17026 224 aaPredicted RBP1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 RPL39P62891 51 aaKnown RBP1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE2BQ13066 116 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE4Q13068 117 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE2EQ4V326 116 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 LINC01556Q5JQF7 62 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 SUMO4Q6EEV6 95 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 SDIM1Q6ZPB5 146 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 SMIM20Q8N5G0 67 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 TMEM141Q96I45 108 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 JPT2Q9H910 190 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 GAGE2DQ9UEU5 116 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 PRO1854Q9UHT4 67 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 C22orf24Q9Y442 160 aa1.97□□□□□ -2.09
SCARNA13-201ENST00000516672 IGLV4-3A0A075B6K6 122 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 TRBV6-8A0A0A6YYG3 113 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 TRAV8-4A0A0B4J246 113 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 IGHV3-38A0A0C4DH36 116 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 A0A0J9YXY3 114 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 TRBV30A0A0K0K1B3 111 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 TRBV27A0A0K0K1C4 114 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 TEX49A0A1B0GTD5 131 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 A0A1B0GUV1 79 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 SDHAF1A6NFY7 115 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 IBA57-AS1B1ANH7 110 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 H3BT86 120 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 H7C423 109 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 LST1O00453 97 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 VCYO14598 125 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 IFITM1P13164 125 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 HERVK_113P61574 105 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 HIST1H4AP62805 103 aaKnown RBP1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 ZNF56Q15929 161 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 PAPPA-AS1Q5QFB9 102 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 FAM74A4Q5TZK3 123 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 SCGB1D4Q6XE38 83 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 MUSTN1Q8IVN3 82 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 SMCR5Q8TEV8 140 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 ZCCHC13Q8WW36 166 aaKnown RBP1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 UBE2WQ96B02 151 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 SPANXDQ9BXN6 97 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 SPANXCQ9NY87 97 aa1.96□□□□□ -2.1
SCARNA13-201ENST00000516672 TRAV8-3A0A0A6YYJ7 113 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 IGHV3-73A0A0B4J1V6 119 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 LOC100131303A0A0U1RQF7 123 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 I3L3M4 83 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 SNCGO76070 127 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 MGPP08493 103 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 SCGB1C2P0DMR2 95 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 LGALS3P17931 250 aaKnown RBP1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 ATXN8Q156A1 80 aa1.95□□□□□ -2.1
SCARNA13-201ENST00000516672 ASB16-AS1Q495Z4 193 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms