RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CHKB-CPT1BH3BT56 60 aa-5.53□□□□□ -3.29
RNU6-539P-201ENST00000516665 OR13C6PQ8NH95 151 aa-5.53□□□□□ -3.29
RNU6-539P-201ENST00000516665 WIZO95785 1651 aa-5.53□□□□□ -3.3
RNU6-539P-201ENST00000516665 SMARCA2P51531 1590 aa-5.54□□□□□ -3.3
RNU6-539P-201ENST00000516665 SZT2Q5T011 3432 aa-5.54□□□□□ -3.3
RNU6-539P-201ENST00000516665 TARBP1Q13395 1621 aaKnown RBP-5.54□□□□□ -3.3
RNU6-539P-201ENST00000516665 S100A9P06702 114 aaKnown RBP-5.54□□□□□ -3.3
RNU6-539P-201ENST00000516665 THEM6Q8WUY1 208 aa-5.54□□□□□ -3.3
RNU6-539P-201ENST00000516665 TIMM8BQ9Y5J9 83 aaPredicted RBP-5.54□□□□□ -3.3
RNU6-539P-201ENST00000516665 MAST1Q9Y2H9 1570 aa-5.55□□□□□ -3.3
RNU6-539P-201ENST00000516665 PRAP1Q96NZ9 151 aa-5.55□□□□□ -3.3
RNU6-539P-201ENST00000516665 SAR1AQ9NR31 198 aa-5.55□□□□□ -3.3
RNU6-539P-201ENST00000516665 EHBP1L1Q8N3D4 1523 aa-5.55□□□□□ -3.3
RNU6-539P-201ENST00000516665 CEP152O94986 1710 aa-5.56□□□□□ -3.3
RNU6-539P-201ENST00000516665 CRYBG1Q9Y4K1 1723 aa-5.56□□□□□ -3.3
RNU6-539P-201ENST00000516665 SPA17Q15506 151 aa-5.56□□□□□ -3.3
RNU6-539P-201ENST00000516665 KIF20BQ96Q89 1820 aa-5.56□□□□□ -3.3
RNU6-539P-201ENST00000516665 UBE2L3P68036 154 aaKnown RBP-5.57□□□□□ -3.3
RNU6-539P-201ENST00000516665 TMEM128Q5BJH2 165 aa-5.57□□□□□ -3.3
RNU6-539P-201ENST00000516665 SMIM20Q8N5G0 67 aa-5.57□□□□□ -3.3
RNU6-539P-201ENST00000516665 CCDC32Q9BV29 185 aa-5.57□□□□□ -3.3
RNU6-539P-201ENST00000516665 SNRNP25Q9BV90 132 aaKnown RBP-5.57□□□□□ -3.3
RNU6-539P-201ENST00000516665 SMPXQ9UHP9 88 aa-5.57□□□□□ -3.3
RNU6-539P-201ENST00000516665 CAMSAP1Q5T5Y3 1602 aa-5.57□□□□□ -3.3
RNU6-539P-201ENST00000516665 MAGI3Q5TCQ9 1506 aa-5.58□□□□□ -3.3
RNU6-539P-201ENST00000516665 DNAH14Q0VDD8 3507 aa-5.58□□□□□ -3.3
RNU6-539P-201ENST00000516665 IAPPP10997 89 aa-5.58□□□□□ -3.3
RNU6-539P-201ENST00000516665 SCGB1A1P11684 91 aa-5.58□□□□□ -3.3
RNU6-539P-201ENST00000516665 MKI67P46013 3256 aaKnown RBP-5.59□□□□□ -3.3
RNU6-539P-201ENST00000516665 LY75O60449 1722 aa-5.59□□□□□ -3.3
RNU6-539P-201ENST00000516665 CEP250Q9BV73 2442 aa-5.59□□□□□ -3.3
RNU6-539P-201ENST00000516665 A8MTW9 85 aa-5.59□□□□□ -3.3
RNU6-539P-201ENST00000516665 DPM2O94777 84 aa-5.59□□□□□ -3.3
RNU6-539P-201ENST00000516665 GNG3P63215 75 aa-5.59□□□□□ -3.3
RNU6-539P-201ENST00000516665 DEFB107AQ8IZN7 70 aa-5.59□□□□□ -3.3
RNU6-539P-201ENST00000516665 H0Y9P7 68 aa-5.6□□□□□ -3.31
RNU6-539P-201ENST00000516665 PSMG3Q9BT73 122 aaPredicted RBP-5.6□□□□□ -3.31
RNU6-539P-201ENST00000516665 OVOS2A0A0G2JMS6 1433 aa-5.6□□□□□ -3.31
RNU6-539P-201ENST00000516665 ABCC5O15440 1437 aa-5.6□□□□□ -3.31
RNU6-539P-201ENST00000516665 HSBP1L1C9JCN9 74 aa-5.61□□□□□ -3.31
RNU6-539P-201ENST00000516665 DEPDC5O75140 1603 aa-5.61□□□□□ -3.31
RNU6-539P-201ENST00000516665 COX7BP24311 80 aa-5.61□□□□□ -3.31
RNU6-539P-201ENST00000516665 GNGT1P63211 74 aa-5.61□□□□□ -3.31
RNU6-539P-201ENST00000516665 CCL7P80098 99 aa-5.61□□□□□ -3.31
RNU6-539P-201ENST00000516665 SERP2Q8N6R1 65 aa-5.61□□□□□ -3.31
RNU6-539P-201ENST00000516665 TCHHQ07283 1943 aa-5.62□□□□□ -3.31
RNU6-539P-201ENST00000516665 QSER1Q2KHR3 1735 aa-5.62□□□□□ -3.31
RNU6-539P-201ENST00000516665 LYNX1G3V0Z9 82 aa-5.62□□□□□ -3.31
RNU6-539P-201ENST00000516665 DEFB136Q30KP8 78 aa-5.62□□□□□ -3.31
RNU6-539P-201ENST00000516665 MNS1Q8NEH6 495 aa-5.62□□□□□ -3.31
RNU6-539P-201ENST00000516665 PSMG4Q5JS54 123 aa-5.63□□□□□ -3.31
RNU6-539P-201ENST00000516665 UBR3Q6ZT12 1888 aa-5.64□□□□□ -3.31
RNU6-539P-201ENST00000516665 A0A1W2PRE2 83 aa-5.64□□□□□ -3.31
RNU6-539P-201ENST00000516665 H3BQF6 201 aa-5.64□□□□□ -3.31
RNU6-539P-201ENST00000516665 SERPINB1P30740 379 aa-5.64□□□□□ -3.31
RNU6-539P-201ENST00000516665 REEP5Q00765 189 aa-5.64□□□□□ -3.31
RNU6-539P-201ENST00000516665 TCTE3Q8IZS6 198 aa-5.64□□□□□ -3.31
RNU6-539P-201ENST00000516665 FAM236AA0A1B0GUQ0 79 aa-5.65□□□□□ -3.31
RNU6-539P-201ENST00000516665 FAM236BA0A1B0GV22 79 aa-5.65□□□□□ -3.31
RNU6-539P-201ENST00000516665 NCS1P62166 190 aa-5.65□□□□□ -3.31
RNU6-539P-201ENST00000516665 HSD52Q0P140 79 aa-5.65□□□□□ -3.31
RNU6-539P-201ENST00000516665 UQCR10Q9UDW1 63 aa-5.65□□□□□ -3.31
RNU6-539P-201ENST00000516665 ARL2BPQ9Y2Y0 163 aa-5.65□□□□□ -3.31
RNU6-539P-201ENST00000516665 PARP4Q9UKK3 1724 aaKnown RBP-5.65□□□□□ -3.31
RNU6-539P-201ENST00000516665 SPEF2Q9C093 1822 aa-5.66□□□□□ -3.32
RNU6-539P-201ENST00000516665 HIST1H1AQ02539 215 aaPredicted RBP-5.66□□□□□ -3.32
RNU6-539P-201ENST00000516665 SFTA2Q6UW10 78 aa-5.66□□□□□ -3.32
RNU6-539P-201ENST00000516665 MAGOHBQ96A72 148 aaKnown RBP-5.66□□□□□ -3.32
RNU6-539P-201ENST00000516665 TPM1P09493 284 aa-5.67□□□□□ -3.32
RNU6-539P-201ENST00000516665 A2ML1A8K2U0 1454 aa-5.67□□□□□ -3.32
RNU6-539P-201ENST00000516665 CDK5RAP2Q96SN8 1893 aa-5.67□□□□□ -3.32
RNU6-539P-201ENST00000516665 SMIM23A6NLE4 172 aa-5.68□□□□□ -3.32
RNU6-539P-201ENST00000516665 SHPRHQ149N8 1683 aa-5.69□□□□□ -3.32
RNU6-539P-201ENST00000516665 F8WEM9 126 aa-5.69□□□□□ -3.32
RNU6-539P-201ENST00000516665 SAMD9Q5K651 1589 aa-5.69□□□□□ -3.32
RNU6-539P-201ENST00000516665 IFI6P09912 130 aa-5.7□□□□□ -3.32
RNU6-539P-201ENST00000516665 SPART-AS1P0CW21 52 aa-5.7□□□□□ -3.32
RNU6-539P-201ENST00000516665 TCTAP57738 103 aa-5.7□□□□□ -3.32
RNU6-539P-201ENST00000516665 LINC00474Q9P2X8 69 aa-5.7□□□□□ -3.32
RNU6-539P-201ENST00000516665 MON2Q7Z3U7 1717 aa-5.71□□□□□ -3.32
RNU6-539P-201ENST00000516665 PIGBOS1A0A0B4J2F0 54 aa-5.71□□□□□ -3.32
RNU6-539P-201ENST00000516665 MT-ATP8P03928 68 aa-5.71□□□□□ -3.32
RNU6-539P-201ENST00000516665 TRGV9Q99603 122 aa-5.71□□□□□ -3.32
RNU6-539P-201ENST00000516665 MRC2Q9UBG0 1479 aa-5.71□□□□□ -3.32
RNU6-539P-201ENST00000516665 TOPAZ1Q8N9V7 1692 aa-5.72□□□□□ -3.32
RNU6-539P-201ENST00000516665 ATP6V1DQ9Y5K8 247 aa-5.72□□□□□ -3.33
RNU6-539P-201ENST00000516665 TEX14Q8IWB6 1497 aa-5.72□□□□□ -3.33
RNU6-539P-201ENST00000516665 CFAP47Q6ZTR5 3102 aa-5.73□□□□□ -3.33
RNU6-539P-201ENST00000516665 LOC400499M0QZD8 3231 aa-5.73□□□□□ -3.33
RNU6-539P-201ENST00000516665 LRRC9Q6ZRR7 1453 aa-5.74□□□□□ -3.33
RNU6-539P-201ENST00000516665 OR9Q1Q8NGQ5 310 aa-5.74□□□□□ -3.33
RNU6-539P-201ENST00000516665 C7orf77A4D0Y5 90 aa-5.75□□□□□ -3.33
RNU6-539P-201ENST00000516665 TNFSF15O95150 251 aa-5.75□□□□□ -3.33
RNU6-539P-201ENST00000516665 PTRHD1Q6GMV3 140 aaKnown RBP-5.75□□□□□ -3.33
RNU6-539P-201ENST00000516665 AP4S1Q9Y587 144 aa-5.75□□□□□ -3.33
RNU6-539P-201ENST00000516665 PKD1L3Q7Z443 1732 aa-5.76□□□□□ -3.33
RNU6-539P-201ENST00000516665 ARL11Q969Q4 196 aa-5.76□□□□□ -3.33
RNU6-539P-201ENST00000516665 C5P01031 1676 aa-5.77□□□□□ -3.33
RNU6-539P-201ENST00000516665 A0A1B0GX51 115 aa-5.77□□□□□ -3.33
RNU6-539P-201ENST00000516665 SCTP09683 121 aa-5.77□□□□□ -3.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms