RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 DNAH8Q96JB1 4490 aa13.28□□□□□ -0.28
LSM6-207ENST00000515311 LOC107984156A0A0G2JMH3 177 aa13.27□□□□□ -0.29
LSM6-207ENST00000515311 ARL17AQ8IVW1 177 aa13.27□□□□□ -0.29
LSM6-207ENST00000515311 CIRBP-AS1Q8TBR5 109 aa13.27□□□□□ -0.29
LSM6-207ENST00000515311 SPANXDQ9BXN6 97 aa13.27□□□□□ -0.29
LSM6-207ENST00000515311 SPANXCQ9NY87 97 aa13.27□□□□□ -0.29
LSM6-207ENST00000515311 TP73-AS1Q9UF72 201 aa13.27□□□□□ -0.29
LSM6-207ENST00000515311 A0A1W2PNN7 141 aa13.26□□□□□ -0.29
LSM6-207ENST00000515311 Q6ZVH6 145 aa13.26□□□□□ -0.29
LSM6-207ENST00000515311 FAM168BA1KXE4 195 aa13.25□□□□□ -0.29
LSM6-207ENST00000515311 XGP55808 180 aa13.25□□□□□ -0.29
LSM6-207ENST00000515311 MIEN1Q9BRT3 115 aa13.24□□□□□ -0.29
LSM6-207ENST00000515311 SPANXB1Q9NS25 103 aaPredicted RBP13.24□□□□□ -0.29
LSM6-207ENST00000515311 KRTAP7-1Q8IUC3 87 aa13.23□□□□□ -0.29
LSM6-207ENST00000515311 HIGD1BQ9P298 99 aa13.23□□□□□ -0.29
LSM6-207ENST00000515311 IGLV5-37A0A075B6J1 123 aa13.22□□□□□ -0.29
LSM6-207ENST00000515311 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
LSM6-207ENST00000515311 SERTAD4-AS1Q5TG53 156 aa13.22□□□□□ -0.29
LSM6-207ENST00000515311 FAM19A5Q7Z5A7 132 aaPredicted RBP13.22□□□□□ -0.29
LSM6-207ENST00000515311 LINC00308Q8TCZ7 52 aa13.22□□□□□ -0.29
LSM6-207ENST00000515311 COPS9Q8WXC6 57 aa13.22□□□□□ -0.29
LSM6-207ENST00000515311 C12orf57Q99622 126 aa13.22□□□□□ -0.29
LSM6-207ENST00000515311 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
LSM6-207ENST00000515311 IFITM1P13164 125 aa13.21□□□□□ -0.29
LSM6-207ENST00000515311 HAMPP81172 84 aa13.21□□□□□ -0.29
LSM6-207ENST00000515311 SOSTDC1Q6X4U4 206 aa13.21□□□□□ -0.29
LSM6-207ENST00000515311 VPREB1P12018 145 aa13.2□□□□□ -0.3
LSM6-207ENST00000515311 C2orf91Q6ZV80 131 aa13.2□□□□□ -0.3
LSM6-207ENST00000515311 UQCR10Q9UDW1 63 aa13.2□□□□□ -0.3
LSM6-207ENST00000515311 APOBP04114 4563 aaKnown RBP13.2□□□□□ -0.3
LSM6-207ENST00000515311 EIF4EBP3O60516 100 aaPredicted RBP13.19□□□□□ -0.3
LSM6-207ENST00000515311 SRSF9Q13242 221 aaKnown RBP eCLIP13.19□□□□□ -0.3
LSM6-207ENST00000515311 M0QXV9 152 aa13.18□□□□□ -0.3
LSM6-207ENST00000515311 NPC2P61916 151 aa13.18□□□□□ -0.3
LSM6-207ENST00000515311 LINC00518Q8N0U6 118 aa13.18□□□□□ -0.3
LSM6-207ENST00000515311 Q8NDZ9 215 aa13.18□□□□□ -0.3
LSM6-207ENST00000515311 NDUFC2O95298 119 aa13.17□□□□□ -0.3
LSM6-207ENST00000515311 NKAPP1Q8N9T2 125 aa13.17□□□□□ -0.3
LSM6-207ENST00000515311 C22orf24Q9Y442 160 aa13.17□□□□□ -0.3
LSM6-207ENST00000515311 LBHQ53QV2 105 aaPredicted RBP13.14□□□□□ -0.31
LSM6-207ENST00000515311 MRPL55Q7Z7F7 128 aaKnown RBP13.14□□□□□ -0.31
LSM6-207ENST00000515311 MUSTN1Q8IVN3 82 aa13.14□□□□□ -0.31
LSM6-207ENST00000515311 HIST1H4GQ99525 98 aa13.14□□□□□ -0.31
LSM6-207ENST00000515311 PRO1933Q9H354 126 aa13.14□□□□□ -0.31
LSM6-207ENST00000515311 PHF5AQ7RTV0 110 aaKnown RBP13.13□□□□□ -0.31
LSM6-207ENST00000515311 TRBV10-2A0A0K0K1G8 114 aa13.12□□□□□ -0.31
LSM6-207ENST00000515311 M0R378 163 aa13.11□□□□□ -0.31
LSM6-207ENST00000515311 PRR3P79522 188 aaKnown RBP13.11□□□□□ -0.31
LSM6-207ENST00000515311 TAL2Q16559 108 aa13.11□□□□□ -0.31
LSM6-207ENST00000515311 C7orf33Q8WU49 177 aa13.11□□□□□ -0.31
LSM6-207ENST00000515311 TSTD3H0UI37 97 aa13.1□□□□□ -0.31
LSM6-207ENST00000515311 BIRC6Q9NR09 4857 aa13.1□□□□□ -0.31
LSM6-207ENST00000515311 NCR3O14931 201 aa13.09□□□□□ -0.31
LSM6-207ENST00000515311 LINC00167Q96N53 147 aa13.09□□□□□ -0.31
LSM6-207ENST00000515311 LCE2BO14633 110 aa13.08□□□□□ -0.32
LSM6-207ENST00000515311 HNRNPA3P51991 378 aaKnown RBP13.08□□□□□ -0.32
LSM6-207ENST00000515311 GAGE10A6NGK3 116 aa13.07□□□□□ -0.32
LSM6-207ENST00000515311 LINC00528Q8N1L1 170 aa13.07□□□□□ -0.32
LSM6-207ENST00000515311 KIAA1109Q2LD37 5005 aa13.07□□□□□ -0.32
LSM6-207ENST00000515311 IGKV2-28A0A075B6P5 120 aa13.06□□□□□ -0.32
LSM6-207ENST00000515311 IGKV2D-28P01615 120 aa13.06□□□□□ -0.32
LSM6-207ENST00000515311 SMR3BP02814 79 aaPredicted RBP13.06□□□□□ -0.32
LSM6-207ENST00000515311 UBE2BP63146 152 aa13.06□□□□□ -0.32
LSM6-207ENST00000515311 HSD52Q0P140 79 aa13.06□□□□□ -0.32
LSM6-207ENST00000515311 HSPG2P98160 4391 aa13.05□□□□□ -0.32
LSM6-207ENST00000515311 IGLV1-50A0A075B6I6 118 aa13.04□□□□□ -0.32
LSM6-207ENST00000515311 A4D1N5 150 aa13.04□□□□□ -0.32
LSM6-207ENST00000515311 CEND1Q8N111 149 aa13.04□□□□□ -0.32
LSM6-207ENST00000515311 RYR1P21817 5038 aa13.04□□□□□ -0.32
LSM6-207ENST00000515311 RPL37AP8A6NKH3 93 aa13.03□□□□□ -0.32
LSM6-207ENST00000515311 KRTAP11-1Q8IUC1 163 aa13.03□□□□□ -0.32
LSM6-207ENST00000515311 IGLV6-57P01721 117 aa13.02□□□□□ -0.33
LSM6-207ENST00000515311 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
LSM6-207ENST00000515311 DDTP30046 118 aa13.01□□□□□ -0.33
LSM6-207ENST00000515311 S100A7L2Q5SY68 101 aa13.01□□□□□ -0.33
LSM6-207ENST00000515311 FAM229AH3BQW9 127 aa13□□□□□ -0.33
LSM6-207ENST00000515311 LINC00337Q8N6G1 96 aa13□□□□□ -0.33
LSM6-207ENST00000515311 PSORS1C2Q9UIG4 136 aa13□□□□□ -0.33
LSM6-207ENST00000515311 TMEM238LA0A1B0GVL6 79 aa12.99□□□□□ -0.33
LSM6-207ENST00000515311 A6NJY4 79 aa12.99□□□□□ -0.33
LSM6-207ENST00000515311 Q8N1X5 172 aa12.99□□□□□ -0.33
LSM6-207ENST00000515311 RPL37AP61513 92 aaKnown RBP12.98□□□□□ -0.33
LSM6-207ENST00000515311 TMEM126AQ9H061 195 aa12.98□□□□□ -0.33
LSM6-207ENST00000515311 KCNQ1DNQ9H478 68 aa12.98□□□□□ -0.33
LSM6-207ENST00000515311 TRAV13-2A0A0B4J235 113 aa12.97□□□□□ -0.33
LSM6-207ENST00000515311 PRYO14603 147 aa12.97□□□□□ -0.33
LSM6-207ENST00000515311 OR13C6PQ8NH95 151 aa12.97□□□□□ -0.33
LSM6-207ENST00000515311 CBY1Q9Y3M2 126 aa12.97□□□□□ -0.33
LSM6-207ENST00000515311 FXYD2P54710 66 aa12.96□□□□□ -0.33
LSM6-207ENST00000515311 PLA2G1BP04054 148 aaKnown RBP12.95□□□□□ -0.34
LSM6-207ENST00000515311 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
LSM6-207ENST00000515311 A6NDN8 102 aa12.94□□□□□ -0.34
LSM6-207ENST00000515311 CTAG1AP78358 180 aa12.94□□□□□ -0.34
LSM6-207ENST00000515311 Q5VSD8 79 aa12.94□□□□□ -0.34
LSM6-207ENST00000515311 TRAV23DV6A0A075B6W5 121 aa12.93□□□□□ -0.34
LSM6-207ENST00000515311 A0A0B4J2C4 111 aa12.93□□□□□ -0.34
LSM6-207ENST00000515311 CFC1BP0CG36 223 aa12.93□□□□□ -0.34
LSM6-207ENST00000515311 CFC1P0CG37 223 aa12.93□□□□□ -0.34
LSM6-207ENST00000515311 C1orf137Q5JT78 98 aa12.93□□□□□ -0.34
LSM6-207ENST00000515311 J3QL48 77 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms