RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 RPL28P46779 137 aaKnown RBP11.31□□□□□ -0.6
LPCAT1-206ENST00000514484 LRP2P98164 4655 aa11.31□□□□□ -0.6
LPCAT1-206ENST00000514484 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
LPCAT1-206ENST00000514484 SMIM13P0DJ93 91 aa11.3□□□□□ -0.6
LPCAT1-206ENST00000514484 UBE2AP49459 152 aa11.29□□□□□ -0.6
LPCAT1-206ENST00000514484 TSPEAR-AS2P59090 65 aa11.29□□□□□ -0.6
LPCAT1-206ENST00000514484 RPL24P83731 157 aaKnown RBP11.29□□□□□ -0.6
LPCAT1-206ENST00000514484 MEIG1Q5JSS6 88 aa11.29□□□□□ -0.6
LPCAT1-206ENST00000514484 HSPB8Q9UJY1 196 aa11.29□□□□□ -0.6
LPCAT1-206ENST00000514484 TMEM238C9JI98 176 aa11.28□□□□□ -0.6
LPCAT1-206ENST00000514484 KRTAP13-1Q8IUC0 172 aa11.27□□□□□ -0.61
LPCAT1-206ENST00000514484 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
LPCAT1-206ENST00000514484 PRLHP81277 87 aa11.26□□□□□ -0.61
LPCAT1-206ENST00000514484 PLNP26678 52 aa11.25□□□□□ -0.61
LPCAT1-206ENST00000514484 MIR7-3HGQ8N6C7 128 aa11.25□□□□□ -0.61
LPCAT1-206ENST00000514484 TMEM126AQ9H061 195 aa11.25□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BKO60814 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 ATP6V1G1O75348 118 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 DPM2O94777 84 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BJP06899 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BOP23527 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BBP33778 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 RPL13AP40429 203 aaKnown RBP11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BDP58876 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BCP62807 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HERV-K104P63124 156 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST2H2BEQ16778 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BHQ93079 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BNQ99877 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 HIST1H2BMQ99879 126 aa11.24□□□□□ -0.61
LPCAT1-206ENST00000514484 A0A087X002 238 aa11.23□□□□□ -0.61
LPCAT1-206ENST00000514484 MYMXA0A1B0GTQ4 84 aa11.23□□□□□ -0.61
LPCAT1-206ENST00000514484 M0R378 163 aa11.23□□□□□ -0.61
LPCAT1-206ENST00000514484 LEPROTO15243 131 aa11.23□□□□□ -0.61
LPCAT1-206ENST00000514484 FAM19A1Q7Z5A9 133 aa11.23□□□□□ -0.61
LPCAT1-206ENST00000514484 ANAPC11Q9NYG5 84 aa11.23□□□□□ -0.61
LPCAT1-206ENST00000514484 NCR3O14931 201 aa11.22□□□□□ -0.61
LPCAT1-206ENST00000514484 IGKCP01834 107 aa11.22□□□□□ -0.61
LPCAT1-206ENST00000514484 BOD1L2Q8IYS8 172 aa11.22□□□□□ -0.61
LPCAT1-206ENST00000514484 PLEKHB2Q96CS7 222 aa11.21□□□□□ -0.61
LPCAT1-206ENST00000514484 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.61
LPCAT1-206ENST00000514484 J3QQQ9 107 aa11.2□□□□□ -0.62
LPCAT1-206ENST00000514484 HERVK_113P61574 105 aa11.2□□□□□ -0.62
LPCAT1-206ENST00000514484 DAND5Q8N907 189 aa11.2□□□□□ -0.62
LPCAT1-206ENST00000514484 LGALS3P17931 250 aaKnown RBP11.17□□□□□ -0.62
LPCAT1-206ENST00000514484 LPAP08519 4548 aa11.16□□□□□ -0.62
LPCAT1-206ENST00000514484 LINC00587B1AMM8 73 aa11.16□□□□□ -0.62
LPCAT1-206ENST00000514484 CRYGAP11844 174 aa11.16□□□□□ -0.62
LPCAT1-206ENST00000514484 SYS1-DBNDD2H3BUS1 97 aa11.15□□□□□ -0.62
LPCAT1-206ENST00000514484 KRTAP13-2Q52LG2 175 aa11.14□□□□□ -0.63
LPCAT1-206ENST00000514484 TYMSOSQ8TAI1 123 aa11.14□□□□□ -0.63
LPCAT1-206ENST00000514484 NMUP48645 174 aa11.13□□□□□ -0.63
LPCAT1-206ENST00000514484 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
LPCAT1-206ENST00000514484 PRYO14603 147 aa11.12□□□□□ -0.63
LPCAT1-206ENST00000514484 TSPAN13O95857 204 aa11.12□□□□□ -0.63
LPCAT1-206ENST00000514484 TRBV10-3A0A0K0K1G6 114 aa11.11□□□□□ -0.63
LPCAT1-206ENST00000514484 IGKV2D-26A0A0A0MRZ7 120 aa11.1□□□□□ -0.63
LPCAT1-206ENST00000514484 E9PLD3 99 aa11.1□□□□□ -0.63
LPCAT1-206ENST00000514484 NPC2P61916 151 aa11.09□□□□□ -0.63
LPCAT1-206ENST00000514484 FAM229BQ4G0N7 80 aa11.09□□□□□ -0.63
LPCAT1-206ENST00000514484 LINC01545Q5VT33 79 aa11.09□□□□□ -0.63
LPCAT1-206ENST00000514484 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
LPCAT1-206ENST00000514484 MIEN1Q9BRT3 115 aa11.08□□□□□ -0.64
LPCAT1-206ENST00000514484 KCNQ1DNQ9H478 68 aa11.08□□□□□ -0.64
LPCAT1-206ENST00000514484 LOC107984156A0A0G2JMH3 177 aa11.07□□□□□ -0.64
LPCAT1-206ENST00000514484 EIF4EBP3O60516 100 aaPredicted RBP11.07□□□□□ -0.64
LPCAT1-206ENST00000514484 C3orf79P0CE67 100 aa11.07□□□□□ -0.64
LPCAT1-206ENST00000514484 PRR4Q16378 134 aa11.07□□□□□ -0.64
LPCAT1-206ENST00000514484 SOSTDC1Q6X4U4 206 aa11.07□□□□□ -0.64
LPCAT1-206ENST00000514484 ARL17AQ8IVW1 177 aa11.07□□□□□ -0.64
LPCAT1-206ENST00000514484 RNF213Q63HN8 5207 aa11.06□□□□□ -0.64
LPCAT1-206ENST00000514484 SPRR1AP35321 89 aa11.06□□□□□ -0.64
LPCAT1-206ENST00000514484 ADAMTSL4-AS1Q5T5F5 129 aa11.06□□□□□ -0.64
LPCAT1-206ENST00000514484 PET117Q6UWS5 81 aa11.06□□□□□ -0.64
LPCAT1-206ENST00000514484 ETDCA0A1B0GVM5 59 aa11.05□□□□□ -0.64
LPCAT1-206ENST00000514484 KRTAP4-16G5E9R7 235 aaPredicted RBP11.05□□□□□ -0.64
LPCAT1-206ENST00000514484 KRTDAPP60985 99 aa11.05□□□□□ -0.64
LPCAT1-206ENST00000514484 COA6Q5JTJ3 125 aaKnown RBP11.05□□□□□ -0.64
LPCAT1-206ENST00000514484 LINC00337Q8N6G1 96 aa11.05□□□□□ -0.64
LPCAT1-206ENST00000514484 DDTP30046 118 aa11.04□□□□□ -0.64
LPCAT1-206ENST00000514484 C3orf22Q8N5N4 141 aa11.04□□□□□ -0.64
LPCAT1-206ENST00000514484 SPRR4Q96PI1 79 aa11.04□□□□□ -0.64
LPCAT1-206ENST00000514484 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
LPCAT1-206ENST00000514484 TRBV10-2A0A0K0K1G8 114 aa11.03□□□□□ -0.64
LPCAT1-206ENST00000514484 TTTY13Q9BZ97 58 aa11.03□□□□□ -0.64
LPCAT1-206ENST00000514484 LINC00304Q8N9R0 145 aa11.02□□□□□ -0.65
LPCAT1-206ENST00000514484 LITAFQ99732 161 aa11.01□□□□□ -0.65
LPCAT1-206ENST00000514484 ZNF815PA8K554 130 aa11□□□□□ -0.65
LPCAT1-206ENST00000514484 NDUFC2O95298 119 aa11□□□□□ -0.65
LPCAT1-206ENST00000514484 S100A12P80511 92 aa11□□□□□ -0.65
LPCAT1-206ENST00000514484 S100A7L2Q5SY68 101 aa11□□□□□ -0.65
LPCAT1-206ENST00000514484 SMCR5Q8TEV8 140 aa11□□□□□ -0.65
LPCAT1-206ENST00000514484 B5MCH6 92 aa10.99□□□□□ -0.65
LPCAT1-206ENST00000514484 PPDPFQ9H3Y8 114 aa10.99□□□□□ -0.65
LPCAT1-206ENST00000514484 IGLV6-57P01721 117 aa10.98□□□□□ -0.65
LPCAT1-206ENST00000514484 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
LPCAT1-206ENST00000514484 ATOH7Q8N100 152 aa10.97□□□□□ -0.65
LPCAT1-206ENST00000514484 RETNLBQ9BQ08 111 aa10.97□□□□□ -0.65
LPCAT1-206ENST00000514484 ERC2-IT1O76042 136 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms