RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 M0R2N4 97 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 UQCR11O14957 56 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 RPL39P62891 51 aaKnown RBP2.34□□□□□ -2.03
NIPBL-207ENST00000513819 DEFB112Q30KQ8 113 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 PRR9Q5T870 116 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 C9orf163Q8N9P6 203 aa2.34□□□□□ -2.03
NIPBL-207ENST00000513819 ZFHX3Q15911 3703 aa2.34□□□□□ -2.04
NIPBL-207ENST00000513819 HEATR5BQ9P2D3 2071 aa2.33□□□□□ -2.04
NIPBL-207ENST00000513819 TRBV6-4A0A1B0GX49 114 aa2.33□□□□□ -2.04
NIPBL-207ENST00000513819 MGPP08493 103 aa2.33□□□□□ -2.04
NIPBL-207ENST00000513819 CCL3L1P16619 93 aa2.33□□□□□ -2.04
NIPBL-207ENST00000513819 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
NIPBL-207ENST00000513819 ARFGEF3Q5TH69 2177 aa2.32□□□□□ -2.04
NIPBL-207ENST00000513819 MED12Q93074 2177 aa2.32□□□□□ -2.04
NIPBL-207ENST00000513819 SVILO95425 2214 aa2.32□□□□□ -2.04
NIPBL-207ENST00000513819 IGKV2-40A0A087WW87 121 aaPredicted RBP2.31□□□□□ -2.04
NIPBL-207ENST00000513819 IGKV2D-40P01614 121 aaPredicted RBP2.31□□□□□ -2.04
NIPBL-207ENST00000513819 PRB1P04280 392 aa2.31□□□□□ -2.04
NIPBL-207ENST00000513819 RNASE3P12724 160 aaKnown RBP2.31□□□□□ -2.04
NIPBL-207ENST00000513819 FREM1Q5H8C1 2179 aa2.31□□□□□ -2.04
NIPBL-207ENST00000513819 ZGRF1Q86YA3 2104 aa2.3□□□□□ -2.04
NIPBL-207ENST00000513819 A0A096LNT2 108 aa2.3□□□□□ -2.04
NIPBL-207ENST00000513819 IGKV3OR2-268A0A0C4DH90 116 aa2.3□□□□□ -2.04
NIPBL-207ENST00000513819 IGLV7-43P04211 117 aa2.3□□□□□ -2.04
NIPBL-207ENST00000513819 COX7BP24311 80 aa2.3□□□□□ -2.04
NIPBL-207ENST00000513819 LINC00158P58513 81 aa2.3□□□□□ -2.04
NIPBL-207ENST00000513819 LEAP2Q969E1 77 aa2.3□□□□□ -2.04
NIPBL-207ENST00000513819 ZNF407Q9C0G0 2248 aa2.29□□□□□ -2.04
NIPBL-207ENST00000513819 STATHP02808 62 aa2.29□□□□□ -2.04
NIPBL-207ENST00000513819 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
NIPBL-207ENST00000513819 LINC00575Q6W349 94 aa2.29□□□□□ -2.04
NIPBL-207ENST00000513819 TMEM167AQ8TBQ9 72 aa2.29□□□□□ -2.04
NIPBL-207ENST00000513819 DNAJC13O75165 2243 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 A0A087WTM6 91 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 WT1-ASQ06250 92 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 DEFB134Q4QY38 66 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 RPL39P5Q59GN2 51 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 Q6ZQY7 126 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 LINC00472Q9H8W2 130 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 CDKN2A-AS1Q9UH64 79 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 MINOS1-NBL1R4GNA1 71 aa2.28□□□□□ -2.04
NIPBL-207ENST00000513819 PRB3Q04118 309 aaPredicted RBP2.27□□□□□ -2.05
NIPBL-207ENST00000513819 M0QY20 66 aa2.26□□□□□ -2.05
NIPBL-207ENST00000513819 DEFB131BA0A096LNP1 70 aa2.25□□□□□ -2.05
NIPBL-207ENST00000513819 DEFB108AA8MXU0 73 aa2.25□□□□□ -2.05
NIPBL-207ENST00000513819 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
NIPBL-207ENST00000513819 LINC00304Q8N9R0 145 aa2.25□□□□□ -2.05
NIPBL-207ENST00000513819 CACNA1CQ13936 2221 aa2.24□□□□□ -2.05
NIPBL-207ENST00000513819 TRGV1A0A0A0MS02 117 aa2.24□□□□□ -2.05
NIPBL-207ENST00000513819 I3L2K1 104 aa2.24□□□□□ -2.05
NIPBL-207ENST00000513819 HRES1P13985 223 aa2.24□□□□□ -2.05
NIPBL-207ENST00000513819 Q8IZM0 81 aa2.24□□□□□ -2.05
NIPBL-207ENST00000513819 BPTFQ12830 3046 aa2.23□□□□□ -2.05
NIPBL-207ENST00000513819 CACNA1DQ01668 2161 aa2.23□□□□□ -2.05
NIPBL-207ENST00000513819 A0A1B0GU33 70 aa2.23□□□□□ -2.05
NIPBL-207ENST00000513819 A0A1B0GU69 56 aa2.23□□□□□ -2.05
NIPBL-207ENST00000513819 MRPL33O75394 65 aaKnown RBP2.23□□□□□ -2.05
NIPBL-207ENST00000513819 COX14Q96I36 57 aa2.23□□□□□ -2.05
NIPBL-207ENST00000513819 CR1P17927 2039 aa2.23□□□□□ -2.05
NIPBL-207ENST00000513819 KNTC1P50748 2209 aa2.22□□□□□ -2.05
NIPBL-207ENST00000513819 SEC16AO15027 2179 aa2.22□□□□□ -2.05
NIPBL-207ENST00000513819 H0YGG7 62 aa2.22□□□□□ -2.05
NIPBL-207ENST00000513819 COX6A2Q02221 97 aa2.22□□□□□ -2.05
NIPBL-207ENST00000513819 COX17Q14061 63 aa2.22□□□□□ -2.05
NIPBL-207ENST00000513819 DEFB132Q7Z7B7 95 aa2.22□□□□□ -2.05
NIPBL-207ENST00000513819 KIAA0100Q14667 2235 aaKnown RBP2.21□□□□□ -2.06
NIPBL-207ENST00000513819 PRRC2BQ5JSZ5 2229 aaKnown RBP2.21□□□□□ -2.06
NIPBL-207ENST00000513819 NBDYA0A0U1RRE5 68 aa2.21□□□□□ -2.06
NIPBL-207ENST00000513819 C10orf55Q5SWW7 151 aa2.21□□□□□ -2.06
NIPBL-207ENST00000513819 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.21□□□□□ -2.06
NIPBL-207ENST00000513819 PATE1Q8WXA2 126 aa2.21□□□□□ -2.06
NIPBL-207ENST00000513819 DOCK10Q96BY6 2186 aa2.21□□□□□ -2.06
NIPBL-207ENST00000513819 Q96NJ1 140 aa2.21□□□□□ -2.06
NIPBL-207ENST00000513819 PRO3102Q9H379 93 aa2.21□□□□□ -2.06
NIPBL-207ENST00000513819 TNCP24821 2201 aa2.2□□□□□ -2.06
NIPBL-207ENST00000513819 UNC13CQ8NB66 2214 aa2.2□□□□□ -2.06
NIPBL-207ENST00000513819 K7EIM0 57 aa2.2□□□□□ -2.06
NIPBL-207ENST00000513819 R4GN34 69 aa2.2□□□□□ -2.06
NIPBL-207ENST00000513819 PRR14LQ5THK1 2151 aa2.19□□□□□ -2.06
NIPBL-207ENST00000513819 MALRD1Q5VYJ5 2156 aa2.19□□□□□ -2.06
NIPBL-207ENST00000513819 A0A1W2PNN7 141 aa2.19□□□□□ -2.06
NIPBL-207ENST00000513819 K7EQZ3 153 aa2.19□□□□□ -2.06
NIPBL-207ENST00000513819 KRTAP5-5Q701N2 237 aaPredicted RBP2.19□□□□□ -2.06
NIPBL-207ENST00000513819 SDK2Q58EX2 2172 aa2.19□□□□□ -2.06
NIPBL-207ENST00000513819 DIDO1Q9BTC0 2240 aaKnown RBP2.18□□□□□ -2.06
NIPBL-207ENST00000513819 IGLV5-48A0A075B6I7 105 aa2.18□□□□□ -2.06
NIPBL-207ENST00000513819 IGKV2-24A0A0C4DH68 120 aa2.18□□□□□ -2.06
NIPBL-207ENST00000513819 DEFB104AQ8WTQ1 72 aa2.18□□□□□ -2.06
NIPBL-207ENST00000513819 SPAG17Q6Q759 2223 aa2.17□□□□□ -2.06
NIPBL-207ENST00000513819 IGLV6-57P01721 117 aa2.17□□□□□ -2.06
NIPBL-207ENST00000513819 CCL19Q99731 98 aa2.17□□□□□ -2.06
NIPBL-207ENST00000513819 ALPK2Q86TB3 2170 aa2.16□□□□□ -2.06
NIPBL-207ENST00000513819 CADP27708 2225 aa2.16□□□□□ -2.06
NIPBL-207ENST00000513819 SDK1Q7Z5N4 2213 aa2.16□□□□□ -2.06
NIPBL-207ENST00000513819 ANGP03950 147 aaKnown RBP2.16□□□□□ -2.06
NIPBL-207ENST00000513819 BRD3OSQ6XYD6 125 aa2.16□□□□□ -2.06
NIPBL-207ENST00000513819 C5orf56Q8N8D9 126 aa2.16□□□□□ -2.06
NIPBL-207ENST00000513819 F5P12259 2224 aa2.15□□□□□ -2.06
NIPBL-207ENST00000513819 USF3Q68DE3 2245 aa2.15□□□□□ -2.06
NIPBL-207ENST00000513819 RPL37AP61513 92 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms