RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 FAM30AQ9NZY2 134 aa7.99□□□□□ -1.13
TCOF1-211ENST00000513346 IGHV4-30-4P0DP06 118 aa7.99□□□□□ -1.13
TCOF1-211ENST00000513346 COL6A5A8TX70 2615 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 IGLV4-60A0A075B6I1 120 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 SEC61GP60059 68 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 PMAIP1Q13794 54 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 DMXL2Q8TDJ6 3036 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 CELA1Q9UNI1 258 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 FLNCQ14315 2725 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 ESRGQ1W209 222 aa7.98□□□□□ -1.13
TCOF1-211ENST00000513346 M0R378 163 aa7.97□□□□□ -1.13
TCOF1-211ENST00000513346 IGLV1-51P01701 117 aa7.97□□□□□ -1.13
TCOF1-211ENST00000513346 CXCL6P80162 114 aa7.97□□□□□ -1.13
TCOF1-211ENST00000513346 TEX15Q9BXT5 2789 aa7.97□□□□□ -1.13
TCOF1-211ENST00000513346 A6NED7 52 aa7.96□□□□□ -1.13
TCOF1-211ENST00000513346 LINC00575Q6W349 94 aa7.96□□□□□ -1.13
TCOF1-211ENST00000513346 BOD1L1Q8NFC6 3051 aa7.96□□□□□ -1.14
TCOF1-211ENST00000513346 HIGD2AQ9BW72 106 aa7.96□□□□□ -1.14
TCOF1-211ENST00000513346 UNC79Q9P2D8 2635 aa7.95□□□□□ -1.14
TCOF1-211ENST00000513346 FHL2Q14192 279 aa7.95□□□□□ -1.14
TCOF1-211ENST00000513346 LELP1Q5T871 98 aa7.95□□□□□ -1.14
TCOF1-211ENST00000513346 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
TCOF1-211ENST00000513346 SYCNQ0VAF6 134 aa7.94□□□□□ -1.14
TCOF1-211ENST00000513346 H0Y9J4 135 aa7.94□□□□□ -1.14
TCOF1-211ENST00000513346 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
TCOF1-211ENST00000513346 C9orf116Q5BN46 136 aaPredicted RBP7.94□□□□□ -1.14
TCOF1-211ENST00000513346 WFDC10BQ8IUB3 73 aa7.94□□□□□ -1.14
TCOF1-211ENST00000513346 CYSRT1A8MQ03 144 aa7.93□□□□□ -1.14
TCOF1-211ENST00000513346 UNQ6190/PRO20217Q6UXQ8 127 aa7.93□□□□□ -1.14
TCOF1-211ENST00000513346 NBEAL1Q6ZS30 2694 aa7.93□□□□□ -1.14
TCOF1-211ENST00000513346 PSPHP1O15172 72 aa7.93□□□□□ -1.14
TCOF1-211ENST00000513346 NANOS2P60321 138 aaKnown RBP7.92□□□□□ -1.14
TCOF1-211ENST00000513346 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
TCOF1-211ENST00000513346 B9D2Q9BPU9 175 aa7.92□□□□□ -1.14
TCOF1-211ENST00000513346 A0A0J9YWU9 116 aa7.92□□□□□ -1.14
TCOF1-211ENST00000513346 DHRS4-AS1Q9P1J3 65 aa7.91□□□□□ -1.14
TCOF1-211ENST00000513346 LINC01561Q8N1V8 128 aa7.91□□□□□ -1.14
TCOF1-211ENST00000513346 ATMQ13315 3056 aa7.91□□□□□ -1.14
TCOF1-211ENST00000513346 COL12A1Q99715 3063 aa7.91□□□□□ -1.14
TCOF1-211ENST00000513346 ZZEF1O43149 2961 aa7.9□□□□□ -1.14
TCOF1-211ENST00000513346 IGHV3OR16-9A0A0B4J2B5 98 aa7.9□□□□□ -1.14
TCOF1-211ENST00000513346 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
TCOF1-211ENST00000513346 M0R2N4 97 aa7.89□□□□□ -1.15
TCOF1-211ENST00000513346 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
TCOF1-211ENST00000513346 C11orf72Q8NBR9 251 aa7.89□□□□□ -1.15
TCOF1-211ENST00000513346 RETNQ9HD89 108 aa7.89□□□□□ -1.15
TCOF1-211ENST00000513346 Q9UF83 564 aa7.89□□□□□ -1.15
TCOF1-211ENST00000513346 A8MTW9 85 aa7.88□□□□□ -1.15
TCOF1-211ENST00000513346 LINC01600Q96MT4 127 aa7.88□□□□□ -1.15
TCOF1-211ENST00000513346 DMXL1Q9Y485 3027 aa7.88□□□□□ -1.15
TCOF1-211ENST00000513346 A0A096LNI7 61 aa7.88□□□□□ -1.15
TCOF1-211ENST00000513346 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
TCOF1-211ENST00000513346 TACC2O95359 2948 aa7.88□□□□□ -1.15
TCOF1-211ENST00000513346 KLK9Q2XQG4 91 aa7.87□□□□□ -1.15
TCOF1-211ENST00000513346 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
TCOF1-211ENST00000513346 IGKV4-1P06312 121 aa7.87□□□□□ -1.15
TCOF1-211ENST00000513346 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
TCOF1-211ENST00000513346 SPATA3Q8NHX4 192 aa7.87□□□□□ -1.15
TCOF1-211ENST00000513346 LINC00208Q96KT6 92 aa7.87□□□□□ -1.15
TCOF1-211ENST00000513346 Q6ZQT0 140 aa7.86□□□□□ -1.15
TCOF1-211ENST00000513346 LY6G6CO95867 125 aa7.85□□□□□ -1.15
TCOF1-211ENST00000513346 C1orf137Q5JT78 98 aa7.85□□□□□ -1.15
TCOF1-211ENST00000513346 Q8N9L7 120 aa7.85□□□□□ -1.15
TCOF1-211ENST00000513346 WIPF1O43516 503 aa7.85□□□□□ -1.15
TCOF1-211ENST00000513346 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
TCOF1-211ENST00000513346 NUPR2A6NF83 97 aa7.84□□□□□ -1.15
TCOF1-211ENST00000513346 LINC00336Q6ZUF6 198 aa7.84□□□□□ -1.15
TCOF1-211ENST00000513346 EGFEM1PQ0D2K5 195 aa7.84□□□□□ -1.15
TCOF1-211ENST00000513346 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
TCOF1-211ENST00000513346 Q6ZTC4 211 aa7.83□□□□□ -1.16
TCOF1-211ENST00000513346 TM2D3Q9BRN9 247 aa7.83□□□□□ -1.16
TCOF1-211ENST00000513346 WDFY3Q8IZQ1 3526 aa7.83□□□□□ -1.16
TCOF1-211ENST00000513346 C2orf48Q96LS8 159 aa7.83□□□□□ -1.16
TCOF1-211ENST00000513346 C6orf223Q8N319 242 aa7.82□□□□□ -1.16
TCOF1-211ENST00000513346 NOTCH1P46531 2555 aa7.82□□□□□ -1.16
TCOF1-211ENST00000513346 COL27A1Q8IZC6 1860 aaPredicted RBP7.82□□□□□ -1.16
TCOF1-211ENST00000513346 C7orf33Q8WU49 177 aa7.81□□□□□ -1.16
TCOF1-211ENST00000513346 KLKP1Q107X0 134 aa7.81□□□□□ -1.16
TCOF1-211ENST00000513346 ZNF575Q86XF7 245 aa7.8□□□□□ -1.16
TCOF1-211ENST00000513346 UBR5O95071 2799 aaPredicted RBP7.8□□□□□ -1.16
TCOF1-211ENST00000513346 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
TCOF1-211ENST00000513346 MUC4Q99102 2169 aa7.8□□□□□ -1.16
TCOF1-211ENST00000513346 KRTAP24-1Q3LI83 254 aa7.79□□□□□ -1.16
TCOF1-211ENST00000513346 KALRNO60229 2985 aa7.78□□□□□ -1.16
TCOF1-211ENST00000513346 H7BZZ5 65 aa7.78□□□□□ -1.16
TCOF1-211ENST00000513346 SMIM29Q86T20 159 aa7.78□□□□□ -1.16
TCOF1-211ENST00000513346 LINC00474Q9P2X8 69 aa7.78□□□□□ -1.16
TCOF1-211ENST00000513346 ITPR2Q14571 2701 aa7.78□□□□□ -1.16
TCOF1-211ENST00000513346 hDV103S1A0JD37 113 aa7.78□□□□□ -1.16
TCOF1-211ENST00000513346 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
TCOF1-211ENST00000513346 C10orf25Q5T742 122 aa7.77□□□□□ -1.16
TCOF1-211ENST00000513346 ERC2-IT1O76042 136 aa7.77□□□□□ -1.17
TCOF1-211ENST00000513346 CFAP47Q6ZTR5 3102 aa7.77□□□□□ -1.17
TCOF1-211ENST00000513346 HCG22E2RYF7 251 aa7.76□□□□□ -1.17
TCOF1-211ENST00000513346 F8WDY8 70 aa7.74□□□□□ -1.17
TCOF1-211ENST00000513346 H0Y9P7 68 aa7.74□□□□□ -1.17
TCOF1-211ENST00000513346 MUC3AQ02505 3323 aa7.74□□□□□ -1.17
TCOF1-211ENST00000513346 CASC2Q6XLA1 102 aa7.74□□□□□ -1.17
TCOF1-211ENST00000513346 DMDP11532 3685 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms