RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 VPREB1P12018 145 aa7.33□□□□□ -1.24
VEGFA-216ENST00000512683 AKR1D1P51857 326 aa7.33□□□□□ -1.24
VEGFA-216ENST00000512683 COX17Q14061 63 aa7.33□□□□□ -1.24
VEGFA-216ENST00000512683 TMEM170BQ5T4T1 132 aa7.33□□□□□ -1.24
VEGFA-216ENST00000512683 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
VEGFA-216ENST00000512683 Q8NDZ9 215 aa7.33□□□□□ -1.24
VEGFA-216ENST00000512683 ZNF625Q96I27 306 aaPredicted RBP7.33□□□□□ -1.24
VEGFA-216ENST00000512683 IGKV2D-26A0A0A0MRZ7 120 aa7.32□□□□□ -1.24
VEGFA-216ENST00000512683 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
VEGFA-216ENST00000512683 KRTAP13-2Q52LG2 175 aa7.32□□□□□ -1.24
VEGFA-216ENST00000512683 CHCHD1Q96BP2 118 aaKnown RBP7.32□□□□□ -1.24
VEGFA-216ENST00000512683 CHTOPQ9Y3Y2 248 aaKnown RBP7.32□□□□□ -1.24
VEGFA-216ENST00000512683 IGKV2-28A0A075B6P5 120 aa7.31□□□□□ -1.24
VEGFA-216ENST00000512683 IGKV2D-28P01615 120 aa7.31□□□□□ -1.24
VEGFA-216ENST00000512683 SNRPEP62304 92 aaKnown RBP7.31□□□□□ -1.24
VEGFA-216ENST00000512683 RPL24P83731 157 aaKnown RBP7.31□□□□□ -1.24
VEGFA-216ENST00000512683 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
VEGFA-216ENST00000512683 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
VEGFA-216ENST00000512683 TRAV12-1A0A0B4J245 112 aa7.3□□□□□ -1.24
VEGFA-216ENST00000512683 TMEM223A0PJW6 202 aa7.3□□□□□ -1.24
VEGFA-216ENST00000512683 S100A12P80511 92 aa7.3□□□□□ -1.24
VEGFA-216ENST00000512683 SPAG11AQ6PDA7 123 aa7.3□□□□□ -1.24
VEGFA-216ENST00000512683 SFTA2Q6UW10 78 aa7.3□□□□□ -1.24
VEGFA-216ENST00000512683 IFI27L1Q96BM0 104 aa7.3□□□□□ -1.24
VEGFA-216ENST00000512683 CDIP1Q9H305 208 aa7.3□□□□□ -1.24
VEGFA-216ENST00000512683 SMIM6P0DI80 62 aa7.29□□□□□ -1.24
VEGFA-216ENST00000512683 ANAPC11Q9NYG5 84 aa7.29□□□□□ -1.24
VEGFA-216ENST00000512683 FAT4Q6V0I7 4981 aa7.29□□□□□ -1.24
VEGFA-216ENST00000512683 IGLV7-46A0A075B6I9 117 aa7.28□□□□□ -1.24
VEGFA-216ENST00000512683 TMEM238C9JI98 176 aa7.28□□□□□ -1.24
VEGFA-216ENST00000512683 FAM19A2Q8N3H0 131 aa7.28□□□□□ -1.24
VEGFA-216ENST00000512683 TMEM126AQ9H061 195 aa7.28□□□□□ -1.24
VEGFA-216ENST00000512683 S100A2P29034 98 aa7.27□□□□□ -1.25
VEGFA-216ENST00000512683 C12orf57Q99622 126 aa7.27□□□□□ -1.25
VEGFA-216ENST00000512683 M0R378 163 aa7.26□□□□□ -1.25
VEGFA-216ENST00000512683 LINC00310P59036 64 aa7.26□□□□□ -1.25
VEGFA-216ENST00000512683 PRLHP81277 87 aa7.26□□□□□ -1.25
VEGFA-216ENST00000512683 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
VEGFA-216ENST00000512683 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
VEGFA-216ENST00000512683 HSBP1O75506 76 aa7.25□□□□□ -1.25
VEGFA-216ENST00000512683 TRGC2P03986 189 aa7.25□□□□□ -1.25
VEGFA-216ENST00000512683 LINC00158P58513 81 aa7.25□□□□□ -1.25
VEGFA-216ENST00000512683 FAM19A1Q7Z5A9 133 aa7.25□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BKO60814 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BJP06899 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BOP23527 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BBP33778 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BDP58876 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BCP62807 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST2H2BEQ16778 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.24□□□□□ -1.25
VEGFA-216ENST00000512683 FP248Q71RG6 208 aaPredicted RBP7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BHQ93079 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BNQ99877 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 HIST1H2BMQ99879 126 aa7.24□□□□□ -1.25
VEGFA-216ENST00000512683 SERF1AO75920 110 aa7.23□□□□□ -1.25
VEGFA-216ENST00000512683 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
VEGFA-216ENST00000512683 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
VEGFA-216ENST00000512683 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
VEGFA-216ENST00000512683 MUC17Q685J3 4493 aa7.23□□□□□ -1.25
VEGFA-216ENST00000512683 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
VEGFA-216ENST00000512683 COA6Q5JTJ3 125 aaKnown RBP7.22□□□□□ -1.25
VEGFA-216ENST00000512683 ZNF706Q9Y5V0 76 aaPredicted RBP7.22□□□□□ -1.25
VEGFA-216ENST00000512683 HERV-K104P63124 156 aa7.21□□□□□ -1.26
VEGFA-216ENST00000512683 MIR7-3HGQ8N6C7 128 aa7.21□□□□□ -1.26
VEGFA-216ENST00000512683 H0Y8G0 127 aa7.2□□□□□ -1.26
VEGFA-216ENST00000512683 LEPROTL1O95214 131 aa7.2□□□□□ -1.26
VEGFA-216ENST00000512683 TSPEAR-AS2P59090 65 aa7.2□□□□□ -1.26
VEGFA-216ENST00000512683 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
VEGFA-216ENST00000512683 HIST3H2BBQ8N257 126 aa7.2□□□□□ -1.26
VEGFA-216ENST00000512683 NDUFA12Q9UI09 145 aa7.2□□□□□ -1.26
VEGFA-216ENST00000512683 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
VEGFA-216ENST00000512683 SPRR4Q96PI1 79 aa7.19□□□□□ -1.26
VEGFA-216ENST00000512683 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
VEGFA-216ENST00000512683 LINC00337Q8N6G1 96 aa7.18□□□□□ -1.26
VEGFA-216ENST00000512683 HIGD2AQ9BW72 106 aa7.18□□□□□ -1.26
VEGFA-216ENST00000512683 PCP4L1A6NKN8 68 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 LINC00587B1AMM8 73 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
VEGFA-216ENST00000512683 NCR3O14931 201 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 LEPROTO15243 131 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 SPINK1P00995 79 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 FABP4P15090 132 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 PLNP26678 52 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 SPRR1AP35321 89 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 KCNQ1DNQ9H478 68 aa7.17□□□□□ -1.26
VEGFA-216ENST00000512683 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
VEGFA-216ENST00000512683 PRYO14603 147 aa7.16□□□□□ -1.26
VEGFA-216ENST00000512683 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
VEGFA-216ENST00000512683 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
VEGFA-216ENST00000512683 HSPB8Q9UJY1 196 aa7.16□□□□□ -1.26
VEGFA-216ENST00000512683 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.26
VEGFA-216ENST00000512683 DPM2O94777 84 aa7.15□□□□□ -1.26
VEGFA-216ENST00000512683 ASB16-AS1Q495Z4 193 aa7.15□□□□□ -1.26
VEGFA-216ENST00000512683 DAND5Q8N907 189 aa7.15□□□□□ -1.26
VEGFA-216ENST00000512683 TRBV10-3A0A0K0K1G6 114 aa7.14□□□□□ -1.27
VEGFA-216ENST00000512683 J3QQQ9 107 aa7.14□□□□□ -1.27
VEGFA-216ENST00000512683 HIST1H2BLQ99880 126 aa7.14□□□□□ -1.27
VEGFA-216ENST00000512683 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms