RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 BAGE3Q86Y29 109 aa8.54□□□□□ -1.04
CCHCR1-229ENST00000512418 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
CCHCR1-229ENST00000512418 CTAG1AP78358 180 aa8.53□□□□□ -1.04
CCHCR1-229ENST00000512418 Q8NDZ9 215 aa8.53□□□□□ -1.04
CCHCR1-229ENST00000512418 CBLN2Q8IUK8 224 aa8.52□□□□□ -1.05
CCHCR1-229ENST00000512418 PLEKHB2Q96CS7 222 aa8.52□□□□□ -1.05
CCHCR1-229ENST00000512418 LINC00158P58513 81 aa8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 TPRXLQ17RH7 258 aa8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 HIGD2AQ9BW72 106 aa8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 CHTOPQ9Y3Y2 248 aaKnown RBP8.5□□□□□ -1.05
CCHCR1-229ENST00000512418 CDIP1Q9H305 208 aa8.48□□□□□ -1.05
CCHCR1-229ENST00000512418 IGLV7-46A0A075B6I9 117 aa8.47□□□□□ -1.05
CCHCR1-229ENST00000512418 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
CCHCR1-229ENST00000512418 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
CCHCR1-229ENST00000512418 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 A0A0U1RRA0 63 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 SPRR4Q96PI1 79 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 FAT4Q6V0I7 4981 aa8.46□□□□□ -1.06
CCHCR1-229ENST00000512418 MUC17Q685J3 4493 aa8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 APOC3P02656 99 aa8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 ZNF706Q9Y5V0 76 aaPredicted RBP8.45□□□□□ -1.06
CCHCR1-229ENST00000512418 PRYO14603 147 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 ATP6V1G1O75348 118 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 SNAPINO95295 136 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 SVBPQ8N300 66 aa8.44□□□□□ -1.06
CCHCR1-229ENST00000512418 NDUFA5Q16718 116 aa8.43□□□□□ -1.06
CCHCR1-229ENST00000512418 MEIG1Q5JSS6 88 aa8.43□□□□□ -1.06
CCHCR1-229ENST00000512418 BOD1L2Q8IYS8 172 aa8.43□□□□□ -1.06
CCHCR1-229ENST00000512418 SPRR1AP35321 89 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 HERV-K104P63124 156 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 LINC00337Q8N6G1 96 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 PPDPFQ9H3Y8 114 aa8.42□□□□□ -1.06
CCHCR1-229ENST00000512418 LINC00587B1AMM8 73 aa8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 NCR3O14931 201 aa8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 LCE2AQ5TA79 106 aaPredicted RBP8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 KCNQ1DNQ9H478 68 aa8.41□□□□□ -1.06
CCHCR1-229ENST00000512418 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.06
CCHCR1-229ENST00000512418 FP248Q71RG6 208 aaPredicted RBP8.4□□□□□ -1.06
CCHCR1-229ENST00000512418 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
CCHCR1-229ENST00000512418 YPEL4Q96NS1 127 aa8.39□□□□□ -1.07
CCHCR1-229ENST00000512418 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
CCHCR1-229ENST00000512418 MYMXA0A1B0GTQ4 84 aa8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 KRTAP4-16G5E9R7 235 aaPredicted RBP8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 HSBP1O75506 76 aa8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 MAP1LC3CQ9BXW4 147 aa8.38□□□□□ -1.07
CCHCR1-229ENST00000512418 TRBV10-3A0A0K0K1G6 114 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 S100A12P80511 92 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 Q8NBF4 154 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 SMCR5Q8TEV8 140 aa8.37□□□□□ -1.07
CCHCR1-229ENST00000512418 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
CCHCR1-229ENST00000512418 DAND5Q8N907 189 aa8.36□□□□□ -1.07
CCHCR1-229ENST00000512418 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
CCHCR1-229ENST00000512418 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
CCHCR1-229ENST00000512418 H0Y8G0 127 aa8.34□□□□□ -1.07
CCHCR1-229ENST00000512418 SPINK1P00995 79 aa8.34□□□□□ -1.07
CCHCR1-229ENST00000512418 TSPEAR-AS2P59090 65 aa8.33□□□□□ -1.08
CCHCR1-229ENST00000512418 LOC107984156A0A0G2JMH3 177 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 B5MCH6 92 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 PLNP26678 52 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 KRTAP13-3Q3SY46 172 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 ARL17AQ8IVW1 177 aa8.32□□□□□ -1.08
CCHCR1-229ENST00000512418 LEPROTO15243 131 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 LEPROTL1O95214 131 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 DDTP30046 118 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 GAGE2AQ6NT46 116 aa8.31□□□□□ -1.08
CCHCR1-229ENST00000512418 J3QQQ9 107 aa8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 MOBPQ13875 183 aa8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 MIEN1Q9BRT3 115 aa8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 SPANXB1Q9NS25 103 aaPredicted RBP8.3□□□□□ -1.08
CCHCR1-229ENST00000512418 IGLV9-49A0A0B4J1Y8 123 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 ERC2-IT1O76042 136 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 TRGC2P03986 189 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 NMUP48645 174 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 HERVK_113P61574 105 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 Q6ZRX8 168 aa8.29□□□□□ -1.08
CCHCR1-229ENST00000512418 SERF1AO75920 110 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 LINC00310P59036 64 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 SSBP3-AS1Q7Z2R9 100 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 Q9BRP9 147 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 HSPB8Q9UJY1 196 aa8.28□□□□□ -1.08
CCHCR1-229ENST00000512418 DPM2O94777 84 aa8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 NDUFC2O95298 119 aa8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 LGALS3P17931 250 aaKnown RBP8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
CCHCR1-229ENST00000512418 IGLV6-57P01721 117 aa8.26□□□□□ -1.09
CCHCR1-229ENST00000512418 S100A7L2Q5SY68 101 aa8.26□□□□□ -1.09
CCHCR1-229ENST00000512418 IGKCP01834 107 aa8.25□□□□□ -1.09
CCHCR1-229ENST00000512418 Q8N377 158 aa8.25□□□□□ -1.09
CCHCR1-229ENST00000512418 TRAV23DV6A0A075B6W5 121 aa8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 FABP4P15090 132 aa8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 JOSD1Q15040 202 aaPredicted RBP8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 PMCHL2Q9BQD1 86 aa8.24□□□□□ -1.09
CCHCR1-229ENST00000512418 SLC25A20O43772 301 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms