RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 C10orf126Q8N4M7 172 aa4.59□□□□□ -1.67
RFC1-213ENST00000512275 LYSTQ99698 3801 aa4.59□□□□□ -1.68
RFC1-213ENST00000512275 TRAV8-4A0A0B4J246 113 aa4.58□□□□□ -1.68
RFC1-213ENST00000512275 IGHV3OR16-9A0A0B4J2B5 98 aa4.58□□□□□ -1.68
RFC1-213ENST00000512275 COX7A2LO14548 114 aa4.58□□□□□ -1.68
RFC1-213ENST00000512275 TSPEAR-AS2P59090 65 aa4.58□□□□□ -1.68
RFC1-213ENST00000512275 TTTY13Q9BZ97 58 aa4.58□□□□□ -1.68
RFC1-213ENST00000512275 LEPROTO15243 131 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 TTC32Q5I0X7 151 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 KRTAP26-1Q6PEX3 210 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 Q6ZR54 194 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 PCP2Q8IVA1 136 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 RMI2Q96E14 147 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 C14orf144Q96I85 54 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 TOMM7Q9P0U1 55 aa4.57□□□□□ -1.68
RFC1-213ENST00000512275 IGHV1-58A0A0C4DH39 117 aa4.56□□□□□ -1.68
RFC1-213ENST00000512275 J3QQQ9 107 aa4.56□□□□□ -1.68
RFC1-213ENST00000512275 LGALS3P17931 250 aaKnown RBP4.56□□□□□ -1.68
RFC1-213ENST00000512275 ORAOV1Q8WV07 137 aa4.56□□□□□ -1.68
RFC1-213ENST00000512275 PLEKHB2Q96CS7 222 aa4.56□□□□□ -1.68
RFC1-213ENST00000512275 K7EP13 123 aa4.55□□□□□ -1.68
RFC1-213ENST00000512275 LECT2O14960 151 aa4.55□□□□□ -1.68
RFC1-213ENST00000512275 COX8AP10176 69 aa4.55□□□□□ -1.68
RFC1-213ENST00000512275 SPAG11BQ08648 103 aa4.55□□□□□ -1.68
RFC1-213ENST00000512275 COX7B2Q8TF08 81 aa4.55□□□□□ -1.68
RFC1-213ENST00000512275 LINC00526Q96FQ7 95 aa4.55□□□□□ -1.68
RFC1-213ENST00000512275 ZNF815PA8K554 130 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 TSTD3H0UI37 97 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 PSCAO43653 123 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 APOMO95445 188 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 SLC25A34Q6PIV7 304 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 C6orf223Q8N319 242 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 C15orf56Q8N910 161 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 NDUFA12Q9UI09 145 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
RFC1-213ENST00000512275 MYMXA0A1B0GTQ4 84 aa4.53□□□□□ -1.68
RFC1-213ENST00000512275 WFDC2Q14508 124 aa4.53□□□□□ -1.68
RFC1-213ENST00000512275 C2orf82Q6UX34 121 aa4.53□□□□□ -1.68
RFC1-213ENST00000512275 BOD1L2Q8IYS8 172 aa4.53□□□□□ -1.68
RFC1-213ENST00000512275 ZNF625Q96I27 306 aaPredicted RBP4.53□□□□□ -1.68
RFC1-213ENST00000512275 HIST1H4GQ99525 98 aa4.53□□□□□ -1.68
RFC1-213ENST00000512275 UQCR10Q9UDW1 63 aa4.53□□□□□ -1.68
RFC1-213ENST00000512275 DNAH10Q8IVF4 4471 aa4.53□□□□□ -1.68
RFC1-213ENST00000512275 NDUFA1O15239 70 aa4.52□□□□□ -1.69
RFC1-213ENST00000512275 KIAA0087Q14695 138 aa4.52□□□□□ -1.69
RFC1-213ENST00000512275 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
RFC1-213ENST00000512275 Q8IZM0 81 aa4.52□□□□□ -1.69
RFC1-213ENST00000512275 NKAPP1Q8N9T2 125 aa4.52□□□□□ -1.69
RFC1-213ENST00000512275 MIEN1Q9BRT3 115 aa4.52□□□□□ -1.69
RFC1-213ENST00000512275 GVQW2A0A096LPI5 108 aaPredicted RBP4.51□□□□□ -1.69
RFC1-213ENST00000512275 A0A0J9YXY3 114 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 LCE6AA0A183 80 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 DLEU1O43261 78 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 CKS1BP61024 79 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 C9orf129Q5T035 196 aaKnown RBP4.51□□□□□ -1.69
RFC1-213ENST00000512275 SCGB1D4Q6XE38 83 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 C2orf91Q6ZV80 131 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 CEND1Q8N111 149 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
RFC1-213ENST00000512275 DDTP30046 118 aa4.5□□□□□ -1.69
RFC1-213ENST00000512275 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
RFC1-213ENST00000512275 C1orf134Q5TEV5 83 aa4.5□□□□□ -1.69
RFC1-213ENST00000512275 UNQ6190/PRO20217Q6UXQ8 127 aa4.5□□□□□ -1.69
RFC1-213ENST00000512275 CAMK2N2Q96S95 79 aa4.5□□□□□ -1.69
RFC1-213ENST00000512275 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.49□□□□□ -1.69
RFC1-213ENST00000512275 SMIM13P0DJ93 91 aa4.49□□□□□ -1.69
RFC1-213ENST00000512275 PFN2P35080 140 aa4.49□□□□□ -1.69
RFC1-213ENST00000512275 CXCL5P42830 114 aa4.49□□□□□ -1.69
RFC1-213ENST00000512275 C9orf116Q5BN46 136 aaPredicted RBP4.49□□□□□ -1.69
RFC1-213ENST00000512275 Q6ZRU5 148 aa4.49□□□□□ -1.69
RFC1-213ENST00000512275 DNAH2Q9P225 4427 aa4.49□□□□□ -1.69
RFC1-213ENST00000512275 SACSQ9NZJ4 4579 aa4.49□□□□□ -1.69
RFC1-213ENST00000512275 HYDINQ4G0P3 5121 aa4.49□□□□□ -1.69
RFC1-213ENST00000512275 LRCOL1A6NCL2 159 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 NPC2P61916 151 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 CTAG1AP78358 180 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 SYCNQ0VAF6 134 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 DAND5Q8N907 189 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 CARD19Q96LW7 228 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 C6orf48Q9UBA6 75 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 ERG28Q9UKR5 140 aa4.48□□□□□ -1.69
RFC1-213ENST00000512275 A0A087WTM6 91 aa4.47□□□□□ -1.69
RFC1-213ENST00000512275 TMEM238C9JI98 176 aa4.47□□□□□ -1.69
RFC1-213ENST00000512275 LINC00158P58513 81 aa4.47□□□□□ -1.69
RFC1-213ENST00000512275 SFTA2Q6UW10 78 aa4.47□□□□□ -1.69
RFC1-213ENST00000512275 HIGD1BQ9P298 99 aa4.47□□□□□ -1.69
RFC1-213ENST00000512275 KMT2AQ03164 3969 aa4.47□□□□□ -1.69
RFC1-213ENST00000512275 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.69
RFC1-213ENST00000512275 LINC00587B1AMM8 73 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 RTL8CO15255 209 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 TIMM17BO60830 172 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 KRTAP5-9P26371 169 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 FUSP35637 526 aaKnown RBP eCLIP4.46□□□□□ -1.7
RFC1-213ENST00000512275 HSD52Q0P140 79 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 CIRBPQ14011 172 aaKnown RBP4.46□□□□□ -1.7
RFC1-213ENST00000512275 BATFQ16520 125 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 MIR7-3HGQ8N6C7 128 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 Q8N814 137 aa4.46□□□□□ -1.7
RFC1-213ENST00000512275 KRTAP4-4Q9BYR3 166 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms