RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 LINC00959A0A1B0GUT2 108 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 TAX1BP3O14907 124 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 COX6A2Q02221 97 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 CST9LQ9H4G1 147 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 PSORS1C2Q9UIG4 136 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 IGLV4-69A0A075B6H9 119 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 IGKV2-24A0A0C4DH68 120 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 E9PLD3 99 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 SMAGPQ0VAQ4 97 aa5.55□□□□□ -1.52
NUP54-211ENST00000512151 TRAV13-1A0A0B4J241 112 aa5.54□□□□□ -1.52
NUP54-211ENST00000512151 A6NDN8 102 aa5.54□□□□□ -1.52
NUP54-211ENST00000512151 UBE2D1P51668 147 aa5.54□□□□□ -1.52
NUP54-211ENST00000512151 TAL2Q16559 108 aa5.54□□□□□ -1.52
NUP54-211ENST00000512151 MIAQ16674 131 aa5.54□□□□□ -1.52
NUP54-211ENST00000512151 TTTY13Q9BZ97 58 aa5.54□□□□□ -1.52
NUP54-211ENST00000512151 VCX2Q9H322 139 aa5.54□□□□□ -1.52
NUP54-211ENST00000512151 C11orf86A6NJI1 115 aa5.53□□□□□ -1.52
NUP54-211ENST00000512151 CCL25O15444 150 aa5.53□□□□□ -1.52
NUP54-211ENST00000512151 LINC00242Q5T6M2 205 aa5.53□□□□□ -1.52
NUP54-211ENST00000512151 Q6ZRP5 223 aa5.53□□□□□ -1.52
NUP54-211ENST00000512151 CHCHD10Q8WYQ3 142 aaPredicted RBP5.53□□□□□ -1.52
NUP54-211ENST00000512151 A0A096LNI7 61 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.52□□□□□ -1.53
NUP54-211ENST00000512151 TRAV8-4A0A0B4J246 113 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 MYMXA0A1B0GTQ4 84 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 H3BRM9 83 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 HERVK_113P61574 105 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 FOXI1Q12951 378 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 SS18Q15532 418 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 Q6ZVH6 145 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 FAM19A3Q7Z5A8 133 aa5.52□□□□□ -1.53
NUP54-211ENST00000512151 XCL1P47992 114 aa5.51□□□□□ -1.53
NUP54-211ENST00000512151 UBE2V1Q13404 147 aa5.51□□□□□ -1.53
NUP54-211ENST00000512151 CEND1Q8N111 149 aa5.51□□□□□ -1.53
NUP54-211ENST00000512151 IGHV3OR16-9A0A0B4J2B5 98 aa5.5□□□□□ -1.53
NUP54-211ENST00000512151 CD164L2Q6UWJ8 174 aa5.5□□□□□ -1.53
NUP54-211ENST00000512151 TMEM223A0PJW6 202 aa5.49□□□□□ -1.53
NUP54-211ENST00000512151 C9orf118A6NHY6 69 aa5.49□□□□□ -1.53
NUP54-211ENST00000512151 FXYD2P54710 66 aa5.49□□□□□ -1.53
NUP54-211ENST00000512151 TMEM170BQ5T4T1 132 aa5.49□□□□□ -1.53
NUP54-211ENST00000512151 C5orf38Q86SI9 138 aa5.49□□□□□ -1.53
NUP54-211ENST00000512151 TINCRA0A1B0GVN0 87 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 ZNF815PA8K554 130 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 LEPROTO15243 131 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 SMIM13P0DJ93 91 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 ZNF22P17026 224 aaPredicted RBP5.48□□□□□ -1.53
NUP54-211ENST00000512151 PTTG1IPP53801 180 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 VAMP3Q15836 100 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 C15orf56Q8N910 161 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 CDKN2A-AS1Q9UH64 79 aa5.48□□□□□ -1.53
NUP54-211ENST00000512151 J3QQQ9 107 aa5.47□□□□□ -1.53
NUP54-211ENST00000512151 HIST1H4GQ99525 98 aa5.47□□□□□ -1.53
NUP54-211ENST00000512151 SPANXB1Q9NS25 103 aaPredicted RBP5.47□□□□□ -1.53
NUP54-211ENST00000512151 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
NUP54-211ENST00000512151 A0A087WZ39 114 aa5.46□□□□□ -1.54
NUP54-211ENST00000512151 A0A1B0GWB2 263 aa5.46□□□□□ -1.54
NUP54-211ENST00000512151 COX7A2LO14548 114 aa5.46□□□□□ -1.54
NUP54-211ENST00000512151 TSPEAR-AS2P59090 65 aa5.46□□□□□ -1.54
NUP54-211ENST00000512151 HERVK_113P63121 156 aa5.46□□□□□ -1.54
NUP54-211ENST00000512151 PLEKHB2Q96CS7 222 aa5.46□□□□□ -1.54
NUP54-211ENST00000512151 H3BUT2 72 aa5.45□□□□□ -1.54
NUP54-211ENST00000512151 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
NUP54-211ENST00000512151 LGALS3P17931 250 aaKnown RBP5.45□□□□□ -1.54
NUP54-211ENST00000512151 HIGD2BQ4VC39 106 aa5.45□□□□□ -1.54
NUP54-211ENST00000512151 SCGB1D4Q6XE38 83 aa5.45□□□□□ -1.54
NUP54-211ENST00000512151 LINC00526Q96FQ7 95 aa5.45□□□□□ -1.54
NUP54-211ENST00000512151 GEMIN7Q9H840 131 aaKnown RBP5.45□□□□□ -1.54
NUP54-211ENST00000512151 IGHV1-58A0A0C4DH39 117 aa5.44□□□□□ -1.54
NUP54-211ENST00000512151 A0A1W2PPM0 123 aa5.44□□□□□ -1.54
NUP54-211ENST00000512151 SMIM1B2RUZ4 78 aa5.44□□□□□ -1.54
NUP54-211ENST00000512151 K7EP34 96 aa5.44□□□□□ -1.54
NUP54-211ENST00000512151 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
NUP54-211ENST00000512151 NHP2Q9NX24 153 aaKnown RBP5.44□□□□□ -1.54
NUP54-211ENST00000512151 IGLV1-50A0A075B6I6 118 aa5.43□□□□□ -1.54
NUP54-211ENST00000512151 GAGE10A6NGK3 116 aa5.43□□□□□ -1.54
NUP54-211ENST00000512151 TSPAN13O95857 204 aa5.43□□□□□ -1.54
NUP54-211ENST00000512151 SPINK8P0C7L1 97 aa5.43□□□□□ -1.54
NUP54-211ENST00000512151 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
NUP54-211ENST00000512151 GTF2H5Q6ZYL4 71 aa5.43□□□□□ -1.54
NUP54-211ENST00000512151 RAB37Q96AX2 223 aa5.43□□□□□ -1.54
NUP54-211ENST00000512151 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
NUP54-211ENST00000512151 K7ERJ3 54 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 FABP2P12104 132 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 MALP21145 153 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
NUP54-211ENST00000512151 CFAP161Q6P656 301 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 IGLV5-39A0A0G2JS06 123 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 A0A1W2PNN7 141 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 APOMO95445 188 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 C1orf137Q5JT78 98 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 DIRC1Q969H9 104 aa5.42□□□□□ -1.54
NUP54-211ENST00000512151 NAA38Q9BRA0 125 aaKnown RBP5.42□□□□□ -1.54
NUP54-211ENST00000512151 A0A0J9YXY3 114 aa5.41□□□□□ -1.54
NUP54-211ENST00000512151 TMEM238C9JI98 176 aa5.41□□□□□ -1.54
NUP54-211ENST00000512151 H0Y9J4 135 aa5.41□□□□□ -1.54
NUP54-211ENST00000512151 SPAG11BQ08648 103 aa5.41□□□□□ -1.54
NUP54-211ENST00000512151 C10orf25Q5T742 122 aa5.41□□□□□ -1.54
NUP54-211ENST00000512151 C2orf82Q6UX34 121 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms