RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 TET2Q6N021 2002 aaPredicted RBP4.07□□□□□ -1.76
USP38-203ENST00000511739 A0A087WYN8 130 aa4.07□□□□□ -1.76
USP38-203ENST00000511739 TNRC18O15417 2968 aaPredicted RBP4.07□□□□□ -1.76
USP38-203ENST00000511739 KIF25-AS1Q9Y6Z4 181 aa4.06□□□□□ -1.76
USP38-203ENST00000511739 IGIPA6NJ69 53 aa4.06□□□□□ -1.76
USP38-203ENST00000511739 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
USP38-203ENST00000511739 CDIP1Q9H305 208 aa4.06□□□□□ -1.76
USP38-203ENST00000511739 RPL37AP61513 92 aaKnown RBP4.06□□□□□ -1.76
USP38-203ENST00000511739 PRUNE2Q8WUY3 3088 aa4.06□□□□□ -1.76
USP38-203ENST00000511739 LINC00313P59037 77 aa4.06□□□□□ -1.76
USP38-203ENST00000511739 COL6A3P12111 3177 aa4.06□□□□□ -1.76
USP38-203ENST00000511739 LINC00315P59091 139 aa4.05□□□□□ -1.76
USP38-203ENST00000511739 LINC01561Q8N1V8 128 aa4.05□□□□□ -1.76
USP38-203ENST00000511739 GAS8-AS1O95177 125 aa4.05□□□□□ -1.76
USP38-203ENST00000511739 A0A087WVE0 104 aa4.05□□□□□ -1.76
USP38-203ENST00000511739 NBDYA0A0U1RRE5 68 aa4.05□□□□□ -1.76
USP38-203ENST00000511739 Q96NJ1 140 aa4.05□□□□□ -1.76
USP38-203ENST00000511739 TP53AIP1Q9HCN2 124 aa4.05□□□□□ -1.76
USP38-203ENST00000511739 A8MTW9 85 aa4.04□□□□□ -1.76
USP38-203ENST00000511739 FASNP49327 2511 aaKnown RBP4.04□□□□□ -1.76
USP38-203ENST00000511739 AGRNO00468 2067 aa4.04□□□□□ -1.76
USP38-203ENST00000511739 ABCA12Q86UK0 2595 aa4.04□□□□□ -1.76
USP38-203ENST00000511739 KRTAP24-1Q3LI83 254 aa4.04□□□□□ -1.76
USP38-203ENST00000511739 HTTP42858 3142 aa4.04□□□□□ -1.76
USP38-203ENST00000511739 Q8NBF4 154 aa4.04□□□□□ -1.76
USP38-203ENST00000511739 LINC00167Q96N53 147 aa4.04□□□□□ -1.76
USP38-203ENST00000511739 CHTF8P0CG12 524 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 KIAA0087Q14695 138 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 KLK9Q2XQG4 91 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 SPAG11AQ6PDA7 123 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 C6orf48Q9UBA6 75 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 ANKRD11Q6UB99 2663 aaPredicted RBP4.03□□□□□ -1.76
USP38-203ENST00000511739 A0A1W2PPR1 153 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 LINC00310P59036 64 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 PHF5AQ7RTV0 110 aaKnown RBP4.03□□□□□ -1.76
USP38-203ENST00000511739 Q9UF83 564 aa4.03□□□□□ -1.76
USP38-203ENST00000511739 CCDC179H3BU77 68 aa4.02□□□□□ -1.77
USP38-203ENST00000511739 TMEM254Q8TBM7 123 aa4.02□□□□□ -1.77
USP38-203ENST00000511739 SPINT4Q6UDR6 99 aa4.02□□□□□ -1.77
USP38-203ENST00000511739 Q6ZSN1 163 aa4.02□□□□□ -1.77
USP38-203ENST00000511739 AMELXQ99217 191 aa4.01□□□□□ -1.77
USP38-203ENST00000511739 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
USP38-203ENST00000511739 EPG5Q9HCE0 2579 aa4.01□□□□□ -1.77
USP38-203ENST00000511739 CHD7Q9P2D1 2997 aa4.01□□□□□ -1.77
USP38-203ENST00000511739 CEP295Q9C0D2 2601 aa4.01□□□□□ -1.77
USP38-203ENST00000511739 ADAMTSL4-AS1Q5T5F5 129 aa4□□□□□ -1.77
USP38-203ENST00000511739 VCANP13611 3396 aa4□□□□□ -1.77
USP38-203ENST00000511739 C2orf91Q6ZV80 131 aa4□□□□□ -1.77
USP38-203ENST00000511739 URB1-AS1Q96HZ7 61 aa4□□□□□ -1.77
USP38-203ENST00000511739 SMIM29Q86T20 159 aa4□□□□□ -1.77
USP38-203ENST00000511739 UNC80Q8N2C7 3258 aa4□□□□□ -1.77
USP38-203ENST00000511739 EPM2AB3EWF7 344 aa3.99□□□□□ -1.77
USP38-203ENST00000511739 CHD9Q3L8U1 2897 aa3.99□□□□□ -1.77
USP38-203ENST00000511739 BPTFQ12830 3046 aa3.99□□□□□ -1.77
USP38-203ENST00000511739 H3BNG1 76 aa3.99□□□□□ -1.77
USP38-203ENST00000511739 TSPEAR-AS2P59090 65 aa3.99□□□□□ -1.77
USP38-203ENST00000511739 COL27A1Q8IZC6 1860 aaPredicted RBP3.98□□□□□ -1.77
USP38-203ENST00000511739 TRANK1O15050 2925 aa3.98□□□□□ -1.77
USP38-203ENST00000511739 CXCL6P80162 114 aa3.98□□□□□ -1.77
USP38-203ENST00000511739 APLNQ9ULZ1 77 aa3.98□□□□□ -1.77
USP38-203ENST00000511739 LINC01546A6NGU7 62 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 BCE1O60756 84 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 TRAV22A0A0B4J277 110 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 ACANP16112 2415 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 LINC00476Q8WZB0 136 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 RBM12B-AS1Q9P1G2 102 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 SPATA3Q8NHX4 192 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 LINC00588Q9Y4M8 146 aa3.97□□□□□ -1.77
USP38-203ENST00000511739 C8orf87E5RJ46 101 aa3.96□□□□□ -1.77
USP38-203ENST00000511739 LINC00304Q8N9R0 145 aa3.96□□□□□ -1.77
USP38-203ENST00000511739 SSBP3-AS1Q7Z2R9 100 aa3.96□□□□□ -1.78
USP38-203ENST00000511739 LINC00846Q9NV44 126 aa3.96□□□□□ -1.78
USP38-203ENST00000511739 IGLV5-37A0A075B6J1 123 aa3.96□□□□□ -1.78
USP38-203ENST00000511739 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
USP38-203ENST00000511739 LAMA2P24043 3122 aaKnown RBP3.96□□□□□ -1.78
USP38-203ENST00000511739 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
USP38-203ENST00000511739 PKD1L2Q7Z442 2459 aa3.95□□□□□ -1.78
USP38-203ENST00000511739 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
USP38-203ENST00000511739 FAM19A4Q96LR4 140 aa3.95□□□□□ -1.78
USP38-203ENST00000511739 A0A096LNJ9 63 aa3.95□□□□□ -1.78
USP38-203ENST00000511739 Q6ZRX8 168 aa3.95□□□□□ -1.78
USP38-203ENST00000511739 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
USP38-203ENST00000511739 IGHV3OR16-9A0A0B4J2B5 98 aa3.94□□□□□ -1.78
USP38-203ENST00000511739 A0A1B0GW54 56 aa3.94□□□□□ -1.78
USP38-203ENST00000511739 H3BPC8 53 aa3.94□□□□□ -1.78
USP38-203ENST00000511739 C11orf72Q8NBR9 251 aa3.94□□□□□ -1.78
USP38-203ENST00000511739 USP9XQ93008 2570 aaPredicted RBP3.94□□□□□ -1.78
USP38-203ENST00000511739 FLNBO75369 2602 aaKnown RBP3.94□□□□□ -1.78
USP38-203ENST00000511739 LINC01554Q52M75 96 aa3.94□□□□□ -1.78
USP38-203ENST00000511739 CDH23Q9H251 3354 aa3.94□□□□□ -1.78
USP38-203ENST00000511739 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
USP38-203ENST00000511739 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
USP38-203ENST00000511739 ELOF1P60002 83 aaKnown RBP3.93□□□□□ -1.78
USP38-203ENST00000511739 IGLV6-57P01721 117 aa3.93□□□□□ -1.78
USP38-203ENST00000511739 LINC00336Q6ZUF6 198 aa3.93□□□□□ -1.78
USP38-203ENST00000511739 M0R2T5 61 aa3.92□□□□□ -1.78
USP38-203ENST00000511739 USP9YO00507 2555 aaPredicted RBP3.92□□□□□ -1.78
USP38-203ENST00000511739 SETD2Q9BYW2 2564 aaPredicted RBP3.92□□□□□ -1.78
USP38-203ENST00000511739 MRPL34Q9BQ48 92 aaKnown RBP3.91□□□□□ -1.78
USP38-203ENST00000511739 IGLV5-39A0A0G2JS06 123 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms