RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 FCER1GP30273 86 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 NDUFV3P56181 108 aaKnown RBP3.96□□□□□ -1.78
COPS4-209ENST00000511653 PRR4Q16378 134 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 LINC01551Q86U37 167 aa3.96□□□□□ -1.78
COPS4-209ENST00000511653 CSDC2Q9Y534 153 aaKnown RBP3.96□□□□□ -1.78
COPS4-209ENST00000511653 IGLV1-50A0A075B6I6 118 aa3.95□□□□□ -1.78
COPS4-209ENST00000511653 RPL39P62891 51 aaKnown RBP3.95□□□□□ -1.78
COPS4-209ENST00000511653 ORAOV1Q8WV07 137 aa3.95□□□□□ -1.78
COPS4-209ENST00000511653 MRPL35Q9NZE8 188 aaKnown RBP3.95□□□□□ -1.78
COPS4-209ENST00000511653 C6orf48Q9UBA6 75 aa3.95□□□□□ -1.78
COPS4-209ENST00000511653 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
COPS4-209ENST00000511653 TSKUQ8WUA8 353 aa3.94□□□□□ -1.78
COPS4-209ENST00000511653 BORCS7Q96B45 105 aa3.94□□□□□ -1.78
COPS4-209ENST00000511653 GEMIN7Q9H840 131 aaKnown RBP3.94□□□□□ -1.78
COPS4-209ENST00000511653 IGHV3OR16-9A0A0B4J2B5 98 aa3.94□□□□□ -1.78
COPS4-209ENST00000511653 M0QXV9 152 aa3.94□□□□□ -1.78
COPS4-209ENST00000511653 NDUFA1O15239 70 aa3.93□□□□□ -1.78
COPS4-209ENST00000511653 TLX1NBP0CAT3 122 aa3.93□□□□□ -1.78
COPS4-209ENST00000511653 MRPL51Q4U2R6 128 aaKnown RBP3.93□□□□□ -1.78
COPS4-209ENST00000511653 COL5A1-AS1Q5SY13 56 aa3.93□□□□□ -1.78
COPS4-209ENST00000511653 TIMM21Q9BVV7 248 aa3.93□□□□□ -1.78
COPS4-209ENST00000511653 TRAPPC1Q9Y5R8 145 aa3.93□□□□□ -1.78
COPS4-209ENST00000511653 SERF1AO75920 110 aa3.92□□□□□ -1.78
COPS4-209ENST00000511653 UBE2D1P51668 147 aa3.92□□□□□ -1.78
COPS4-209ENST00000511653 UBE2BP63146 152 aa3.92□□□□□ -1.78
COPS4-209ENST00000511653 KIAA0087Q14695 138 aa3.92□□□□□ -1.78
COPS4-209ENST00000511653 C9orf129Q5T035 196 aaKnown RBP3.92□□□□□ -1.78
COPS4-209ENST00000511653 KIR2DL4Q99706 377 aa3.92□□□□□ -1.78
COPS4-209ENST00000511653 V9GYV3 84 aa3.92□□□□□ -1.78
COPS4-209ENST00000511653 IGLV4-3A0A075B6K6 122 aa3.91□□□□□ -1.78
COPS4-209ENST00000511653 TSPAN13O95857 204 aa3.91□□□□□ -1.78
COPS4-209ENST00000511653 IGLC3P0DOY3 106 aa3.91□□□□□ -1.78
COPS4-209ENST00000511653 C2orf82Q6UX34 121 aa3.91□□□□□ -1.78
COPS4-209ENST00000511653 VAMP8Q9BV40 100 aa3.91□□□□□ -1.78
COPS4-209ENST00000511653 OSTCQ9NRP0 149 aa3.91□□□□□ -1.78
COPS4-209ENST00000511653 NDUFAF8A1L188 74 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 PPP1R17O96001 155 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 MT3P25713 68 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 RPL13AP40429 203 aaKnown RBP3.9□□□□□ -1.78
COPS4-209ENST00000511653 SMAGPQ0VAQ4 97 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 FAM104BQ5XKR9 115 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 Q8N377 158 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 GNB1LQ9BYB4 327 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 UQCR10Q9UDW1 63 aa3.9□□□□□ -1.78
COPS4-209ENST00000511653 A0A0U1RQV1 116 aa3.9□□□□□ -1.79
COPS4-209ENST00000511653 RPL37AP8A6NKH3 93 aa3.9□□□□□ -1.79
COPS4-209ENST00000511653 PPBPP02775 128 aa3.9□□□□□ -1.79
COPS4-209ENST00000511653 MRPS36P82909 103 aaKnown RBP3.9□□□□□ -1.79
COPS4-209ENST00000511653 COX19Q49B96 90 aa3.9□□□□□ -1.79
COPS4-209ENST00000511653 SMIM2Q9BVW6 85 aa3.9□□□□□ -1.79
COPS4-209ENST00000511653 SPANXA1Q9NS26 97 aa3.9□□□□□ -1.79
COPS4-209ENST00000511653 LAMTOR2Q9Y2Q5 125 aa3.9□□□□□ -1.79
COPS4-209ENST00000511653 NDUFC2-KCTD14E9PQ53 114 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 ZNF861PO60384 105 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 NPYP01303 97 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 CKS2P33552 79 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 RPL32P62910 135 aaKnown RBP3.89□□□□□ -1.79
COPS4-209ENST00000511653 HBBP68871 147 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 LINC00242Q5T6M2 205 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 TMEM136Q6ZRR5 245 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 C20orf78Q9BR46 151 aa3.89□□□□□ -1.79
COPS4-209ENST00000511653 TRBV30A0A0K0K1B3 111 aa3.88□□□□□ -1.79
COPS4-209ENST00000511653 C20orf202A1L168 122 aa3.88□□□□□ -1.79
COPS4-209ENST00000511653 D6R8Y8 96 aa3.88□□□□□ -1.79
COPS4-209ENST00000511653 C3orf79P0CE67 100 aa3.88□□□□□ -1.79
COPS4-209ENST00000511653 SPATA45Q537H7 98 aa3.88□□□□□ -1.79
COPS4-209ENST00000511653 ERASQ7Z444 233 aa3.88□□□□□ -1.79
COPS4-209ENST00000511653 NAT8BQ9UHF3 227 aa3.88□□□□□ -1.79
COPS4-209ENST00000511653 RETNLBQ9BQ08 111 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 OCR1Q9BZK8 76 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 XAGE1AQ9HD64 81 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 SMIM27A0A1W2PRY6 76 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 SEC61GP60059 68 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 VAMP3Q15836 100 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
COPS4-209ENST00000511653 LINC00173Q6ZV60 143 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 BAGE3Q86Y29 109 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 ANAPC11Q9NYG5 84 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 C22orf24Q9Y442 160 aa3.87□□□□□ -1.79
COPS4-209ENST00000511653 A0A1B0GW15 77 aa3.86□□□□□ -1.79
COPS4-209ENST00000511653 A0A1B0GXF2 115 aa3.86□□□□□ -1.79
COPS4-209ENST00000511653 IFI27P40305 119 aaPredicted RBP3.86□□□□□ -1.79
COPS4-209ENST00000511653 PMCHL1Q16048 86 aa3.86□□□□□ -1.79
COPS4-209ENST00000511653 C18orf32Q8TCD1 76 aa3.86□□□□□ -1.79
COPS4-209ENST00000511653 KRTDAPP60985 99 aa3.85□□□□□ -1.79
COPS4-209ENST00000511653 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
COPS4-209ENST00000511653 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
COPS4-209ENST00000511653 Q6ZN92 141 aa3.85□□□□□ -1.79
COPS4-209ENST00000511653 TYMSOSQ8TAI1 123 aa3.85□□□□□ -1.79
COPS4-209ENST00000511653 TMEM141Q96I45 108 aa3.85□□□□□ -1.79
COPS4-209ENST00000511653 TOMM7Q9P0U1 55 aa3.85□□□□□ -1.79
COPS4-209ENST00000511653 TMEM238C9JI98 176 aa3.84□□□□□ -1.79
COPS4-209ENST00000511653 TAX1BP3O14907 124 aa3.84□□□□□ -1.79
COPS4-209ENST00000511653 BATFQ16520 125 aa3.84□□□□□ -1.79
COPS4-209ENST00000511653 C5orf47Q569G3 176 aa3.84□□□□□ -1.79
COPS4-209ENST00000511653 BCE1O60756 84 aa3.84□□□□□ -1.8
COPS4-209ENST00000511653 CRYGAP11844 174 aa3.84□□□□□ -1.8
COPS4-209ENST00000511653 Q6ZVH6 145 aa3.84□□□□□ -1.8
COPS4-209ENST00000511653 MRPL55Q7Z7F7 128 aaKnown RBP3.84□□□□□ -1.8
COPS4-209ENST00000511653 ORMDL3Q8N138 153 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms